RNA–Protein interactions for RNA: ENST00000576964.5

ABR-235, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-235ENST00000576964 GRAPQ13588 217 aa13.56□□□□□ -0.24
ABR-235ENST00000576964 CCDC93Q567U6 631 aa13.56□□□□□ -0.24
ABR-235ENST00000576964 CC2D2BQ6DHV5 1058 aa13.56□□□□□ -0.24
ABR-235ENST00000576964 TMC4Q7Z404 712 aa13.56□□□□□ -0.24
ABR-235ENST00000576964 GRAPLQ8TC17 118 aaPredicted RBP13.56□□□□□ -0.24
ABR-235ENST00000576964 ABCC4O15439 1325 aa13.56□□□□□ -0.24
ABR-235ENST00000576964 TRIM27P14373 513 aa13.55□□□□□ -0.24
ABR-235ENST00000576964 GRIPAP1Q4V328 841 aa13.55□□□□□ -0.24
ABR-235ENST00000576964 CLUAP1Q96AJ1 413 aa13.55□□□□□ -0.24
ABR-235ENST00000576964 CCDC85AQ96PX6 553 aaPredicted RBP13.55□□□□□ -0.24
ABR-235ENST00000576964 CDC5LQ99459 802 aaKnown RBP13.55□□□□□ -0.24
ABR-235ENST00000576964 CHMP3Q9Y3E7 222 aa13.55□□□□□ -0.24
ABR-235ENST00000576964 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
ABR-235ENST00000576964 PLA2G12BQ9BX93 195 aa13.54□□□□□ -0.24
ABR-235ENST00000576964 LAMB2P55268 1798 aa13.53□□□□□ -0.24
ABR-235ENST00000576964 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
ABR-235ENST00000576964 UBTFL1P0CB47 393 aaPredicted RBP13.53□□□□□ -0.24
ABR-235ENST00000576964 TAF7LQ5H9L4 462 aa13.53□□□□□ -0.24
ABR-235ENST00000576964 INTS3Q68E01 1043 aaKnown RBP13.53□□□□□ -0.24
ABR-235ENST00000576964 ANKRD18AQ8IVF6 992 aa13.53□□□□□ -0.24
ABR-235ENST00000576964 DZIP1LQ8IYY4 767 aaKnown RBP13.53□□□□□ -0.24
ABR-235ENST00000576964 TTLL11Q8NHH1 800 aa13.53□□□□□ -0.24
ABR-235ENST00000576964 TAOK3Q9H2K8 898 aa13.53□□□□□ -0.24
ABR-235ENST00000576964 DDX60Q8IY21 1712 aaKnown RBP13.53□□□□□ -0.24
ABR-235ENST00000576964 GNAI3P08754 354 aa13.52□□□□□ -0.25
ABR-235ENST00000576964 IGHMBP2P38935 993 aaKnown RBP13.52□□□□□ -0.25
ABR-235ENST00000576964 CASP7P55210 303 aa13.52□□□□□ -0.25
ABR-235ENST00000576964 RPS8P62241 208 aaKnown RBP13.52□□□□□ -0.25
ABR-235ENST00000576964 IFIT5Q13325 482 aaKnown RBP13.52□□□□□ -0.25
ABR-235ENST00000576964 CCDC57Q2TAC2 916 aa13.52□□□□□ -0.25
ABR-235ENST00000576964 GREM2Q9H772 168 aa13.52□□□□□ -0.25
ABR-235ENST00000576964 ATP6V0A2Q9Y487 856 aa13.52□□□□□ -0.25
ABR-235ENST00000576964 UTYO14607 1347 aa13.52□□□□□ -0.25
ABR-235ENST00000576964 ARFGEF1Q9Y6D6 1849 aa13.52□□□□□ -0.25
ABR-235ENST00000576964 ANKRD18BA2A2Z9 1011 aa13.51□□□□□ -0.25
ABR-235ENST00000576964 NBPF7P0C2Y1 421 aaPredicted RBP13.51□□□□□ -0.25
ABR-235ENST00000576964 ITGA6P23229 1130 aa13.51□□□□□ -0.25
ABR-235ENST00000576964 LMBR1LQ6UX01 489 aa13.51□□□□□ -0.25
ABR-235ENST00000576964 ITPRIPQ8IWB1 547 aa13.51□□□□□ -0.25
ABR-235ENST00000576964 SP8Q8IXZ3 490 aa13.51□□□□□ -0.25
ABR-235ENST00000576964 CELF1Q92879 486 aaKnown RBP13.51□□□□□ -0.25
ABR-235ENST00000576964 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
ABR-235ENST00000576964 MPHOSPH8Q99549 860 aa13.51□□□□□ -0.25
ABR-235ENST00000576964 USP44Q9H0E7 712 aa13.51□□□□□ -0.25
ABR-235ENST00000576964 SEC31BQ9NQW1 1179 aa13.51□□□□□ -0.25
ABR-235ENST00000576964 RTL9Q8NET4 1388 aa13.5□□□□□ -0.25
ABR-235ENST00000576964 CSF1RP07333 972 aa13.5□□□□□ -0.25
ABR-235ENST00000576964 LMNB1P20700 586 aa13.5□□□□□ -0.25
ABR-235ENST00000576964 FKBP4Q02790 459 aaKnown RBP eCLIP13.5□□□□□ -0.25
ABR-235ENST00000576964 RASSF7Q02833 373 aa13.5□□□□□ -0.25
ABR-235ENST00000576964 FAM161AQ3B820 660 aa13.5□□□□□ -0.25
ABR-235ENST00000576964 DPP8Q6V1X1 898 aaPredicted RBP13.5□□□□□ -0.25
ABR-235ENST00000576964 TMEM57Q8N5G2 664 aa13.5□□□□□ -0.25
ABR-235ENST00000576964 SUPT20HQ8NEM7 779 aa13.5□□□□□ -0.25
ABR-235ENST00000576964 C7orf43Q8WVR3 580 aa13.5□□□□□ -0.25
ABR-235ENST00000576964 CACNA1SQ13698 1873 aa13.5□□□□□ -0.25
ABR-235ENST00000576964 SLX4Q8IY92 1834 aa13.5□□□□□ -0.25
ABR-235ENST00000576964 YY1P25490 414 aa13.49□□□□□ -0.25
ABR-235ENST00000576964 FOXO4P98177 505 aa13.49□□□□□ -0.25
ABR-235ENST00000576964 CHMP4BQ9H444 224 aaKnown RBP13.49□□□□□ -0.25
ABR-235ENST00000576964 BICC1Q9H694 974 aaKnown RBP13.49□□□□□ -0.25
ABR-235ENST00000576964 RNF181Q9P0P0 153 aa13.49□□□□□ -0.25
ABR-235ENST00000576964 ANKIB1Q9P2G1 1089 aa13.49□□□□□ -0.25
ABR-235ENST00000576964 LTBP3Q9NS15 1303 aa13.48□□□□□ -0.25
ABR-235ENST00000576964 NFKBIEO00221 500 aa13.48□□□□□ -0.25
ABR-235ENST00000576964 C9orf131Q5VYM1 1079 aa13.48□□□□□ -0.25
ABR-235ENST00000576964 OLFM4Q6UX06 510 aa13.48□□□□□ -0.25
ABR-235ENST00000576964 MPNDQ8N594 471 aa13.48□□□□□ -0.25
ABR-235ENST00000576964 PSMD1Q99460 953 aa13.48□□□□□ -0.25
ABR-235ENST00000576964 NSFL1CQ9UNZ2 370 aaKnown RBP13.48□□□□□ -0.25
ABR-235ENST00000576964 GNAI2P04899 355 aa13.47□□□□□ -0.25
ABR-235ENST00000576964 EPHA10Q5JZY3 1008 aa13.47□□□□□ -0.25
ABR-235ENST00000576964 MEIS3Q99687 375 aa13.47□□□□□ -0.25
ABR-235ENST00000576964 BSDC1Q9NW68 430 aaPredicted RBP13.47□□□□□ -0.25
ABR-235ENST00000576964 TNNQ9UQP3 1299 aa13.47□□□□□ -0.25
ABR-235ENST00000576964 MYH3P11055 1940 aa13.47□□□□□ -0.25
ABR-235ENST00000576964 C6orf229H3BNL8 230 aa13.46□□□□□ -0.25
ABR-235ENST00000576964 PLIN1O60240 522 aa13.46□□□□□ -0.25
ABR-235ENST00000576964 RABL6Q3YEC7 729 aaPredicted RBP13.46□□□□□ -0.25
ABR-235ENST00000576964 PANK1Q8TE04 598 aa13.46□□□□□ -0.25
ABR-235ENST00000576964 JDP2Q8WYK2 163 aa13.46□□□□□ -0.25
ABR-235ENST00000576964 EYA3Q99504 573 aa13.46□□□□□ -0.25
ABR-235ENST00000576964 ZNF277Q9NRM2 450 aaPredicted RBP13.46□□□□□ -0.25
ABR-235ENST00000576964 CNNM1Q9NRU3 951 aa13.46□□□□□ -0.25
ABR-235ENST00000576964 LRRFIP2Q9Y608 721 aaKnown RBP13.46□□□□□ -0.25
ABR-235ENST00000576964 IARSP41252 1262 aaKnown RBP13.45□□□□□ -0.26
ABR-235ENST00000576964 KCNJ4P48050 445 aa13.45□□□□□ -0.26
ABR-235ENST00000576964 PDE3AQ14432 1141 aa13.45□□□□□ -0.26
ABR-235ENST00000576964 LDHAL6AQ6ZMR3 332 aa13.45□□□□□ -0.26
ABR-235ENST00000576964 LARGE2Q8N3Y3 721 aa13.45□□□□□ -0.26
ABR-235ENST00000576964 ANKRD2Q9GZV1 360 aa13.45□□□□□ -0.26
ABR-235ENST00000576964 GGA1Q9UJY5 639 aa13.45□□□□□ -0.26
ABR-235ENST00000576964 XDHP47989 1333 aa13.44□□□□□ -0.26
ABR-235ENST00000576964 ZC3H4Q9UPT8 1303 aaKnown RBP13.44□□□□□ -0.26
ABR-235ENST00000576964 G3V3G9 751 aa13.44□□□□□ -0.26
ABR-235ENST00000576964 PPIP5K2O43314 1243 aa13.44□□□□□ -0.26
ABR-235ENST00000576964 UFL1O94874 794 aa13.44□□□□□ -0.26
ABR-235ENST00000576964 RLBP1P12271 317 aa13.44□□□□□ -0.26
ABR-235ENST00000576964 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
ABR-235ENST00000576964 DCAF8Q5TAQ9 597 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms