RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PDIA6Q15084 440 aa15.29■□□□□ 0.04
CTDNEP1-212ENST00000576613 FAM161AQ3B820 660 aa15.29■□□□□ 0.04
CTDNEP1-212ENST00000576613 DDX46Q7L014 1031 aaKnown RBP15.29■□□□□ 0.04
CTDNEP1-212ENST00000576613 ZC3H15Q8WU90 426 aaKnown RBP15.29■□□□□ 0.04
CTDNEP1-212ENST00000576613 BABAM1Q9NWV8 329 aa15.29■□□□□ 0.04
CTDNEP1-212ENST00000576613 CCDC85CA6NKD9 419 aa15.28■□□□□ 0.04
CTDNEP1-212ENST00000576613 AOC2O75106 756 aa15.28■□□□□ 0.04
CTDNEP1-212ENST00000576613 TMC4Q7Z404 712 aa15.28■□□□□ 0.04
CTDNEP1-212ENST00000576613 NLRP10Q86W26 655 aa15.28■□□□□ 0.04
CTDNEP1-212ENST00000576613 GLIS2Q9BZE0 524 aaPredicted RBP15.28■□□□□ 0.04
CTDNEP1-212ENST00000576613 PGAP2Q9UHJ9 254 aa15.28■□□□□ 0.04
CTDNEP1-212ENST00000576613 SH3TC1Q8TE82 1336 aa15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 LRRC37AA6NMS7 1700 aa15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 RAD17O75943 681 aa15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 ANXA1P04083 346 aa15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 HCLS1P14317 486 aaPredicted RBP15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 BRPF1P55201 1214 aaPredicted RBP15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 LMOD3Q0VAK6 560 aa15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 GRAPQ13588 217 aa15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 PROSER3Q2NL68 480 aa15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 CDC37L1Q7L3B6 337 aa15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 GRAPLQ8TC17 118 aaPredicted RBP15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 ZNF408Q9H9D4 720 aa15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 TRMT112Q9UI30 125 aaKnown RBP15.27■□□□□ 0.04
CTDNEP1-212ENST00000576613 H7C1D1 291 aa15.26■□□□□ 0.03
CTDNEP1-212ENST00000576613 RIPK4P57078 832 aa15.26■□□□□ 0.03
CTDNEP1-212ENST00000576613 MLLT1Q03111 559 aaPredicted RBP15.26■□□□□ 0.03
CTDNEP1-212ENST00000576613 AIMP1Q12904 312 aaKnown RBP15.26■□□□□ 0.03
CTDNEP1-212ENST00000576613 COPS6Q7L5N1 327 aa15.26■□□□□ 0.03
CTDNEP1-212ENST00000576613 TSKSQ9UJT2 592 aa15.26■□□□□ 0.03
CTDNEP1-212ENST00000576613 TCIRG1Q13488 830 aa15.25■□□□□ 0.03
CTDNEP1-212ENST00000576613 XAGE3Q8WTP9 111 aa15.25■□□□□ 0.03
CTDNEP1-212ENST00000576613 CNOT7Q9UIV1 285 aaKnown RBP15.25■□□□□ 0.03
CTDNEP1-212ENST00000576613 DUOX1Q9NRD9 1551 aa15.24■□□□□ 0.03
CTDNEP1-212ENST00000576613 HIRAP54198 1017 aaPredicted RBP15.24■□□□□ 0.03
CTDNEP1-212ENST00000576613 NOGQ13253 232 aa15.24■□□□□ 0.03
CTDNEP1-212ENST00000576613 TRPM4Q8TD43 1214 aa15.24■□□□□ 0.03
CTDNEP1-212ENST00000576613 NECTIN2Q92692 538 aa15.24■□□□□ 0.03
CTDNEP1-212ENST00000576613 TAF1P21675 1872 aa15.24■□□□□ 0.03
CTDNEP1-212ENST00000576613 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
CTDNEP1-212ENST00000576613 RGS19P49795 217 aa15.23■□□□□ 0.03
CTDNEP1-212ENST00000576613 MICALL2Q8IY33 904 aa15.23■□□□□ 0.03
CTDNEP1-212ENST00000576613 YDJCA8MPS7 323 aa15.22■□□□□ 0.03
CTDNEP1-212ENST00000576613 SLC34A2O95436 690 aa15.22■□□□□ 0.03
CTDNEP1-212ENST00000576613 TMPOP42166 694 aaKnown RBP15.22■□□□□ 0.03
CTDNEP1-212ENST00000576613 WASHC4Q2M389 1173 aa15.22■□□□□ 0.03
CTDNEP1-212ENST00000576613 DPF2Q92785 391 aa15.22■□□□□ 0.03
CTDNEP1-212ENST00000576613 HUNKP57058 714 aa15.21■□□□□ 0.03
CTDNEP1-212ENST00000576613 USP48Q86UV5 1035 aa15.21■□□□□ 0.03
CTDNEP1-212ENST00000576613 CFAP44Q96MT7 982 aa15.21■□□□□ 0.03
CTDNEP1-212ENST00000576613 MCOLN1Q9GZU1 580 aa15.21■□□□□ 0.03
CTDNEP1-212ENST00000576613 NSFL1CQ9UNZ2 370 aaKnown RBP15.21■□□□□ 0.03
CTDNEP1-212ENST00000576613 CASP8AP2Q9UKL3 1982 aa15.21■□□□□ 0.03
CTDNEP1-212ENST00000576613 RPS12P25398 132 aaKnown RBP15.2■□□□□ 0.02
CTDNEP1-212ENST00000576613 PLBD2Q8NHP8 589 aa15.2■□□□□ 0.02
CTDNEP1-212ENST00000576613 CHPF2Q9P2E5 772 aa15.2■□□□□ 0.02
CTDNEP1-212ENST00000576613 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
CTDNEP1-212ENST00000576613 SHTN1A0MZ66 631 aa15.19■□□□□ 0.02
CTDNEP1-212ENST00000576613 C6orf229H3BNL8 230 aa15.19■□□□□ 0.02
CTDNEP1-212ENST00000576613 PSMD14O00487 310 aa15.19■□□□□ 0.02
CTDNEP1-212ENST00000576613 DGKZQ13574 1117 aa15.19■□□□□ 0.02
CTDNEP1-212ENST00000576613 HDGFL1Q5TGJ6 251 aa15.19■□□□□ 0.02
CTDNEP1-212ENST00000576613 KRT26Q7Z3Y9 468 aa15.19■□□□□ 0.02
CTDNEP1-212ENST00000576613 DCPSQ96C86 337 aaKnown RBP15.19■□□□□ 0.02
CTDNEP1-212ENST00000576613 EYA3Q99504 573 aa15.19■□□□□ 0.02
CTDNEP1-212ENST00000576613 DBNDD1Q9H9R9 158 aa15.19■□□□□ 0.02
CTDNEP1-212ENST00000576613 CHL1O00533 1208 aa15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 RIMBP2O15034 1052 aa15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 HOXB7P09629 217 aa15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 SF3B3Q15393 1217 aaKnown RBP15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 TBC1D10BQ4KMP7 808 aaPredicted RBP15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 ANKRD13DQ6ZTN6 518 aa15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 SAMD7Q7Z3H4 446 aa15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 C2orf69Q8N8R5 385 aa15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 FAM89AQ96GI7 184 aa15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 GBA2Q9HCG7 927 aaPredicted RBP15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 DBF4Q9UBU7 674 aaPredicted RBP15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 LAS1LQ9Y4W2 734 aaKnown RBP15.18■□□□□ 0.02
CTDNEP1-212ENST00000576613 ECE2O60344 883 aa15.17■□□□□ 0.02
CTDNEP1-212ENST00000576613 RALBP1Q15311 655 aa15.17■□□□□ 0.02
CTDNEP1-212ENST00000576613 NEUROD2Q15784 382 aa15.17■□□□□ 0.02
CTDNEP1-212ENST00000576613 KRT24Q2M2I5 525 aa15.17■□□□□ 0.02
CTDNEP1-212ENST00000576613 RGMBQ6NW40 437 aa15.17■□□□□ 0.02
CTDNEP1-212ENST00000576613 CELF1Q92879 486 aaKnown RBP15.17■□□□□ 0.02
CTDNEP1-212ENST00000576613 CCDC102AQ96A19 550 aa15.17■□□□□ 0.02
CTDNEP1-212ENST00000576613 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
CTDNEP1-212ENST00000576613 ISCA1Q9BUE6 129 aa15.17■□□□□ 0.02
CTDNEP1-212ENST00000576613 SAGE1Q9NXZ1 904 aa15.17■□□□□ 0.02
CTDNEP1-212ENST00000576613 GPSM2P81274 684 aa15.16■□□□□ 0.02
CTDNEP1-212ENST00000576613 HYPKQ9NX55 129 aa15.16■□□□□ 0.02
CTDNEP1-212ENST00000576613 POLLQ9UGP5 575 aa15.16■□□□□ 0.02
CTDNEP1-212ENST00000576613 ATP5J2-PTCD1G3V325 749 aa15.15■□□□□ 0.02
CTDNEP1-212ENST00000576613 HSP90B1P14625 803 aaKnown RBP15.15■□□□□ 0.02
CTDNEP1-212ENST00000576613 DOK7Q18PE1 504 aa15.15■□□□□ 0.02
CTDNEP1-212ENST00000576613 RBM26Q5T8P6 1007 aaKnown RBP15.15■□□□□ 0.02
CTDNEP1-212ENST00000576613 SULF1Q8IWU6 871 aa15.15■□□□□ 0.02
CTDNEP1-212ENST00000576613 ZIC5Q96T25 663 aa15.15■□□□□ 0.02
CTDNEP1-212ENST00000576613 ZC3H12CQ9C0D7 883 aaKnown RBP15.15■□□□□ 0.02
CTDNEP1-212ENST00000576613 POLR2AP24928 1970 aaKnown RBP15.15■□□□□ 0.02
CTDNEP1-212ENST00000576613 RTL9Q8NET4 1388 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms