RNA–Protein interactions for RNA: ENST00000576390.5

P4HB-223, Transcript of prolyl 4-hydroxylase subunit beta, human

TSL 4 BASIC

Gene P4HB, Length 439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
P4HB-223	ENST00000576390	DUSP27	Q5VZP5	1158 aa		24.64	■■□□□ 1.54
P4HB-223	ENST00000576390	DDX46	Q7L014	1031 aa	Known RBP	24.64	■■□□□ 1.54
P4HB-223	ENST00000576390	MPND	Q8N594	471 aa		24.63	■■□□□ 1.53
P4HB-223	ENST00000576390	HYPK	Q9NX55	129 aa		24.63	■■□□□ 1.53
P4HB-223	ENST00000576390	DPP8	Q6V1X1	898 aa	Predicted RBP	24.62	■■□□□ 1.53
P4HB-223	ENST00000576390	USP50	Q70EL3	339 aa	Predicted RBP	24.62	■■□□□ 1.53
P4HB-223	ENST00000576390	ZNRF3	Q9ULT6	936 aa		24.62	■■□□□ 1.53
P4HB-223	ENST00000576390	COL4A1	P02462	1669 aa		24.62	■■□□□ 1.53
P4HB-223	ENST00000576390	VEGFB	P49765	207 aa		24.61	■■□□□ 1.53
P4HB-223	ENST00000576390	CXCL9	Q07325	125 aa		24.61	■■□□□ 1.53
P4HB-223	ENST00000576390	KIAA2012	Q0VF49	1180 aa		24.61	■■□□□ 1.53
P4HB-223	ENST00000576390	TMC4	Q7Z404	712 aa		24.61	■■□□□ 1.53
P4HB-223	ENST00000576390	RASSF10	A6NK89	507 aa		24.6	■■□□□ 1.53
P4HB-223	ENST00000576390	APAF1	O14727	1248 aa		24.6	■■□□□ 1.53
P4HB-223	ENST00000576390	TRIM28	Q13263	835 aa	Known RBP	24.6	■■□□□ 1.53
P4HB-223	ENST00000576390	SF3B3	Q15393	1217 aa	Known RBP	24.6	■■□□□ 1.53
P4HB-223	ENST00000576390	TNS4	Q8IZW8	715 aa		24.6	■■□□□ 1.53
P4HB-223	ENST00000576390	IFT57	Q9NWB7	429 aa		24.6	■■□□□ 1.53
P4HB-223	ENST00000576390	GPRC5D	Q9NZD1	345 aa		24.6	■■□□□ 1.53
P4HB-223	ENST00000576390	ATP5J2-PTCD1	G3V325	749 aa		24.59	■■□□□ 1.53
P4HB-223	ENST00000576390	FAM89A	Q96GI7	184 aa		24.59	■■□□□ 1.53
P4HB-223	ENST00000576390	ZNF428	Q96B54	188 aa		24.58	■■□□□ 1.53
P4HB-223	ENST00000576390	GNAI1	P63096	354 aa		24.57	■■□□□ 1.52
P4HB-223	ENST00000576390	ADARB2	Q9NS39	739 aa	Known RBP	24.57	■■□□□ 1.52
P4HB-223	ENST00000576390	THSD7B	Q9C0I4	1608 aa		24.57	■■□□□ 1.52
P4HB-223	ENST00000576390	DEFB115	Q30KQ5	88 aa		24.56	■■□□□ 1.52
P4HB-223	ENST00000576390	CELF1	Q92879	486 aa	Known RBP	24.56	■■□□□ 1.52
P4HB-223	ENST00000576390	CDHR2	Q9BYE9	1310 aa		24.56	■■□□□ 1.52
P4HB-223	ENST00000576390	FOXN1	O15353	648 aa		24.55	■■□□□ 1.52
P4HB-223	ENST00000576390	CALD1	Q05682	793 aa	Known RBP	24.55	■■□□□ 1.52
P4HB-223	ENST00000576390	FMR1	Q06787	632 aa	Known RBP eCLIP	24.55	■■□□□ 1.52
P4HB-223	ENST00000576390	CIAPIN1	Q6FI81	312 aa		24.55	■■□□□ 1.52
P4HB-223	ENST00000576390	YDJC	A8MPS7	323 aa		24.54	■■□□□ 1.52
P4HB-223	ENST00000576390	GMPS	P49915	693 aa	Predicted RBP	24.54	■■□□□ 1.52
P4HB-223	ENST00000576390	PHAX	Q9H814	394 aa	Known RBP	24.54	■■□□□ 1.52
P4HB-223	ENST00000576390	WBP1L	Q9NX94	342 aa		24.53	■■□□□ 1.52
P4HB-223	ENST00000576390	PGAP2	Q9UHJ9	254 aa		24.53	■■□□□ 1.52
P4HB-223	ENST00000576390	IRS4	O14654	1257 aa	Predicted RBP	24.52	■■□□□ 1.52
P4HB-223	ENST00000576390	TNIP1	Q15025	636 aa		24.52	■■□□□ 1.52
P4HB-223	ENST00000576390	POLR2A	P24928	1970 aa	Known RBP	24.51	■■□□□ 1.51
P4HB-223	ENST00000576390	ELL2	O00472	640 aa	Predicted RBP	24.51	■■□□□ 1.51
P4HB-223	ENST00000576390	RAD17	O75943	681 aa		24.51	■■□□□ 1.51
P4HB-223	ENST00000576390	GOLGA2	Q08379	1002 aa		24.51	■■□□□ 1.51
P4HB-223	ENST00000576390	CST9	Q5W186	159 aa		24.51	■■□□□ 1.51
P4HB-223	ENST00000576390	RIC3	Q7Z5B4	369 aa		24.51	■■□□□ 1.51
P4HB-223	ENST00000576390	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	24.51	■■□□□ 1.51
P4HB-223	ENST00000576390	C8orf58	Q8NAV2	365 aa		24.51	■■□□□ 1.51
P4HB-223	ENST00000576390	ABT1	Q9ULW3	272 aa	Known RBP	24.51	■■□□□ 1.51
P4HB-223	ENST00000576390	WDR33	Q9C0J8	1336 aa	Known RBP	24.51	■■□□□ 1.51
P4HB-223	ENST00000576390	TRAF5	O00463	557 aa		24.5	■■□□□ 1.51
P4HB-223	ENST00000576390	RTL5	Q5HYW3	569 aa	Predicted RBP	24.5	■■□□□ 1.51
P4HB-223	ENST00000576390	PRDM10	Q9NQV6	1147 aa		24.5	■■□□□ 1.51
P4HB-223	ENST00000576390	SCN9A	Q15858	1988 aa		24.5	■■□□□ 1.51
P4HB-223	ENST00000576390	MYH3	P11055	1940 aa		24.49	■■□□□ 1.51
P4HB-223	ENST00000576390	POLL	Q9UGP5	575 aa		24.49	■■□□□ 1.51
P4HB-223	ENST00000576390	NSFL1C	Q9UNZ2	370 aa	Known RBP	24.49	■■□□□ 1.51
P4HB-223	ENST00000576390	CTCF	P49711	727 aa	Predicted RBP	24.48	■■□□□ 1.51
P4HB-223	ENST00000576390	HIRA	P54198	1017 aa	Predicted RBP	24.48	■■□□□ 1.51
P4HB-223	ENST00000576390	GPSM2	P81274	684 aa		24.48	■■□□□ 1.51
P4HB-223	ENST00000576390	PSME4	Q14997	1843 aa		24.48	■■□□□ 1.51
P4HB-223	ENST00000576390	WASHC4	Q2M389	1173 aa		24.48	■■□□□ 1.51
P4HB-223	ENST00000576390	BCL2L13	Q9BXK5	485 aa		24.48	■■□□□ 1.51
P4HB-223	ENST00000576390	RPS8	P62241	208 aa	Known RBP	24.47	■■□□□ 1.51
P4HB-223	ENST00000576390	CCDC191	Q8NCU4	936 aa		24.47	■■□□□ 1.51
P4HB-223	ENST00000576390	ZC3H15	Q8WU90	426 aa	Known RBP	24.47	■■□□□ 1.51
P4HB-223	ENST00000576390	AIDA	Q96BJ3	306 aa		24.47	■■□□□ 1.51
P4HB-223	ENST00000576390	MYD88	Q99836	296 aa		24.47	■■□□□ 1.51
P4HB-223	ENST00000576390	TLL2	Q9Y6L7	1015 aa		24.47	■■□□□ 1.51
P4HB-223	ENST00000576390	PCCA	P05165	728 aa	Predicted RBP	24.46	■■□□□ 1.51
P4HB-223	ENST00000576390	CCDC184	Q52MB2	194 aa		24.46	■■□□□ 1.51
P4HB-223	ENST00000576390	TRPM4	Q8TD43	1214 aa		24.46	■■□□□ 1.51
P4HB-223	ENST00000576390	CNOT7	Q9UIV1	285 aa	Known RBP	24.46	■■□□□ 1.51
P4HB-223	ENST00000576390	CACNA1F	O60840	1977 aa		24.45	■■□□□ 1.51
P4HB-223	ENST00000576390	SHTN1	A0MZ66	631 aa		24.45	■■□□□ 1.5
P4HB-223	ENST00000576390	CAPN15	O75808	1086 aa		24.45	■■□□□ 1.5
P4HB-223	ENST00000576390	CCDC30	Q5VVM6	783 aa		24.45	■■□□□ 1.5
P4HB-223	ENST00000576390	TSPYL6	Q8N831	410 aa		24.45	■■□□□ 1.5
P4HB-223	ENST00000576390	DPF2	Q92785	391 aa		24.45	■■□□□ 1.5
P4HB-223	ENST00000576390	METTL22	Q9BUU2	404 aa	Predicted RBP	24.45	■■□□□ 1.5
P4HB-223	ENST00000576390	DBNDD1	Q9H9R9	158 aa		24.45	■■□□□ 1.5
P4HB-223	ENST00000576390	SEC31B	Q9NQW1	1179 aa		24.45	■■□□□ 1.5
P4HB-223	ENST00000576390	PODXL2	Q9NZ53	605 aa		24.45	■■□□□ 1.5
P4HB-223	ENST00000576390	PSMD14	O00487	310 aa		24.44	■■□□□ 1.5
P4HB-223	ENST00000576390	HSP90B1	P14625	803 aa	Known RBP	24.44	■■□□□ 1.5
P4HB-223	ENST00000576390	TBC1D16	Q8TBP0	767 aa		24.44	■■□□□ 1.5
P4HB-223	ENST00000576390	CAPNS2	Q96L46	248 aa		24.44	■■□□□ 1.5
P4HB-223	ENST00000576390	EYA3	Q99504	573 aa		24.44	■■□□□ 1.5
P4HB-223	ENST00000576390	CHMP4A	Q9BY43	222 aa		24.44	■■□□□ 1.5
P4HB-223	ENST00000576390	GLIS2	Q9BZE0	524 aa	Predicted RBP	24.44	■■□□□ 1.5
P4HB-223	ENST00000576390	C6orf229	H3BNL8	230 aa		24.43	■■□□□ 1.5
P4HB-223	ENST00000576390	RIMBP2	O15034	1052 aa		24.43	■■□□□ 1.5
P4HB-223	ENST00000576390	MAP2K1	Q02750	393 aa	Predicted RBP	24.43	■■□□□ 1.5
P4HB-223	ENST00000576390	MICALL2	Q8IY33	904 aa		24.43	■■□□□ 1.5
P4HB-223	ENST00000576390	CWC25	Q9NXE8	425 aa	Predicted RBP	24.43	■■□□□ 1.5
P4HB-223	ENST00000576390	ZBTB12	Q9Y330	459 aa	Predicted RBP	24.43	■■□□□ 1.5
P4HB-223	ENST00000576390	RTL9	Q8NET4	1388 aa		24.42	■■□□□ 1.5
P4HB-223	ENST00000576390	PDE8A	O60658	829 aa		24.42	■■□□□ 1.5
P4HB-223	ENST00000576390	DDX58	O95786	925 aa	Known RBP	24.42	■■□□□ 1.5
P4HB-223	ENST00000576390	ECE1	P42892	770 aa		24.42	■■□□□ 1.5
P4HB-223	ENST00000576390	CCDC27	Q2M243	656 aa		24.42	■■□□□ 1.5

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