RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 PTMSP20962 102 aa28.47■■■□□ 2.15
NPLOC4-217ENST00000574897 L1TD1Q5T7N2 865 aaKnown RBP28.47■■■□□ 2.15
NPLOC4-217ENST00000574897 DDX46Q7L014 1031 aaKnown RBP28.47■■■□□ 2.15
NPLOC4-217ENST00000574897 SYNE4Q8N205 404 aa28.47■■■□□ 2.15
NPLOC4-217ENST00000574897 TCHHQ07283 1943 aa28.47■■■□□ 2.15
NPLOC4-217ENST00000574897 HLFQ16534 295 aa28.46■■■□□ 2.15
NPLOC4-217ENST00000574897 KIF6Q6ZMV9 814 aa28.46■■■□□ 2.15
NPLOC4-217ENST00000574897 BRD1O95696 1058 aa28.46■■■□□ 2.15
NPLOC4-217ENST00000574897 STARD3NLO95772 234 aa28.46■■■□□ 2.15
NPLOC4-217ENST00000574897 TEX13AQ9BXU3 409 aaPredicted RBP28.46■■■□□ 2.15
NPLOC4-217ENST00000574897 GAS2L3Q86XJ1 694 aa28.45■■■□□ 2.14
NPLOC4-217ENST00000574897 SEC62Q99442 399 aaKnown RBP28.45■■■□□ 2.14
NPLOC4-217ENST00000574897 PANK2Q9BZ23 570 aa28.45■■■□□ 2.14
NPLOC4-217ENST00000574897 EYA2O00167 538 aa28.44■■■□□ 2.14
NPLOC4-217ENST00000574897 SLC27A2O14975 620 aa28.44■■■□□ 2.14
NPLOC4-217ENST00000574897 GPTP24298 496 aa28.44■■■□□ 2.14
NPLOC4-217ENST00000574897 HAUS7Q99871 368 aa28.44■■■□□ 2.14
NPLOC4-217ENST00000574897 ZNF609O15014 1411 aa28.44■■■□□ 2.14
NPLOC4-217ENST00000574897 CCDC129Q6ZRS4 1044 aa28.44■■■□□ 2.14
NPLOC4-217ENST00000574897 ZSWIM6Q9HCJ5 1215 aa28.44■■■□□ 2.14
NPLOC4-217ENST00000574897 LIMCH1Q9UPQ0 1083 aa28.44■■■□□ 2.14
NPLOC4-217ENST00000574897 ZBTB1Q9Y2K1 713 aa28.44■■■□□ 2.14
NPLOC4-217ENST00000574897 PRPF40AO75400 957 aaKnown RBP28.43■■■□□ 2.14
NPLOC4-217ENST00000574897 IL15P40933 162 aaPredicted RBP28.43■■■□□ 2.14
NPLOC4-217ENST00000574897 PRIM1P49642 420 aaKnown RBP28.43■■■□□ 2.14
NPLOC4-217ENST00000574897 SLFNL1Q499Z3 407 aa28.43■■■□□ 2.14
NPLOC4-217ENST00000574897 PDRG1Q9NUG6 133 aa28.43■■■□□ 2.14
NPLOC4-217ENST00000574897 NUP98P52948 1817 aa28.43■■■□□ 2.14
NPLOC4-217ENST00000574897 LRP6O75581 1613 aa28.43■■■□□ 2.14
NPLOC4-217ENST00000574897 CYP19A1P11511 503 aaPredicted RBP28.43■■■□□ 2.14
NPLOC4-217ENST00000574897 KLHL40Q2TBA0 621 aa28.43■■■□□ 2.14
NPLOC4-217ENST00000574897 MAP3K15Q6ZN16 1313 aa28.42■■■□□ 2.14
NPLOC4-217ENST00000574897 RTN4Q9NQC3 1192 aaKnown RBP28.42■■■□□ 2.14
NPLOC4-217ENST00000574897 PHLPP1O60346 1717 aa28.41■■■□□ 2.14
NPLOC4-217ENST00000574897 ANKRD36CQ5JPF3 1778 aa28.41■■■□□ 2.14
NPLOC4-217ENST00000574897 ZKSCAN1P17029 563 aaPredicted RBP28.41■■■□□ 2.14
NPLOC4-217ENST00000574897 FOXD4L6Q3SYB3 417 aaPredicted RBP28.41■■■□□ 2.14
NPLOC4-217ENST00000574897 FOXD4L3Q6VB84 417 aaPredicted RBP28.41■■■□□ 2.14
NPLOC4-217ENST00000574897 CYP46A1Q9Y6A2 500 aa28.41■■■□□ 2.14
NPLOC4-217ENST00000574897 TAF5LO75529 589 aa28.4■■■□□ 2.14
NPLOC4-217ENST00000574897 TCEANC2Q96MN5 208 aa28.4■■■□□ 2.14
NPLOC4-217ENST00000574897 TM6SF1Q9BZW5 370 aa28.4■■■□□ 2.14
NPLOC4-217ENST00000574897 RPAP1Q9BWH6 1393 aaPredicted RBP28.4■■■□□ 2.14
NPLOC4-217ENST00000574897 A0A0G2JS52 829 aa28.4■■■□□ 2.14
NPLOC4-217ENST00000574897 NCLP19338 710 aaKnown RBP28.4■■■□□ 2.14
NPLOC4-217ENST00000574897 GIGYF2Q6Y7W6 1299 aaKnown RBP28.4■■■□□ 2.14
NPLOC4-217ENST00000574897 NRAPQ86VF7 1730 aa28.39■■■□□ 2.14
NPLOC4-217ENST00000574897 JCADQ9P266 1359 aa28.39■■■□□ 2.14
NPLOC4-217ENST00000574897 TRIM28Q13263 835 aaKnown RBP28.39■■■□□ 2.14
NPLOC4-217ENST00000574897 VPS53Q5VIR6 699 aa28.39■■■□□ 2.14
NPLOC4-217ENST00000574897 LTBP4Q8N2S1 1624 aa28.39■■■□□ 2.14
NPLOC4-217ENST00000574897 A0A1B0GUL7 405 aa28.39■■■□□ 2.14
NPLOC4-217ENST00000574897 GOLIM4O00461 696 aa28.39■■■□□ 2.14
NPLOC4-217ENST00000574897 PCCAP05165 728 aaPredicted RBP28.39■■■□□ 2.14
NPLOC4-217ENST00000574897 CCDC57Q2TAC2 916 aa28.39■■■□□ 2.14
NPLOC4-217ENST00000574897 MYH3P11055 1940 aa28.37■■■□□ 2.13
NPLOC4-217ENST00000574897 CCDC83Q8IWF9 413 aa28.37■■■□□ 2.13
NPLOC4-217ENST00000574897 GPR108Q9NPR9 543 aa28.37■■■□□ 2.13
NPLOC4-217ENST00000574897 ZBTB38Q8NAP3 1195 aaPredicted RBP28.37■■■□□ 2.13
NPLOC4-217ENST00000574897 GPT2Q8TD30 523 aa28.37■■■□□ 2.13
NPLOC4-217ENST00000574897 CIAO1O76071 339 aa28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 ST3GAL1Q11201 340 aa28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 CAVIN1Q6NZI2 390 aaKnown RBP28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 KBTBD3Q8NAB2 608 aa28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 GRPEL1Q9HAV7 217 aa28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 TBC1D2BQ9UPU7 963 aa28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 NUTM2BA6NNL0 878 aaPredicted RBP28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 NUTM2EB1AL46 878 aaPredicted RBP28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 NLRP10Q86W26 655 aa28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 NUTM2AQ8IVF1 878 aaPredicted RBP28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 ACSBG1Q96GR2 724 aa28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 PAG1Q9NWQ8 432 aa28.36■■■□□ 2.13
NPLOC4-217ENST00000574897 NSFL1CQ9UNZ2 370 aaKnown RBP28.35■■■□□ 2.13
NPLOC4-217ENST00000574897 ME3Q16798 604 aa28.35■■■□□ 2.13
NPLOC4-217ENST00000574897 SPATA31A1Q5TZJ5 1347 aa28.35■■■□□ 2.13
NPLOC4-217ENST00000574897 ADORA1P30542 326 aa28.34■■■□□ 2.13
NPLOC4-217ENST00000574897 NECAB1Q8N987 351 aa28.34■■■□□ 2.13
NPLOC4-217ENST00000574897 CEP126Q9P2H0 1117 aa28.33■■■□□ 2.13
NPLOC4-217ENST00000574897 RBM27Q9P2N5 1060 aaKnown RBP28.33■■■□□ 2.13
NPLOC4-217ENST00000574897 RFX7Q2KHR2 1363 aa28.33■■■□□ 2.13
NPLOC4-217ENST00000574897 MRE11P49959 708 aa28.33■■■□□ 2.13
NPLOC4-217ENST00000574897 TPCN1Q9ULQ1 816 aa28.33■■■□□ 2.13
NPLOC4-217ENST00000574897 CSF1RP07333 972 aa28.32■■■□□ 2.12
NPLOC4-217ENST00000574897 MCMDC2Q4G0Z9 681 aa28.32■■■□□ 2.12
NPLOC4-217ENST00000574897 PLA2G12BQ9BX93 195 aa28.32■■■□□ 2.12
NPLOC4-217ENST00000574897 IFIT1P09914 478 aaKnown RBP28.32■■■□□ 2.12
NPLOC4-217ENST00000574897 RNF20Q5VTR2 975 aa28.32■■■□□ 2.12
NPLOC4-217ENST00000574897 GDPD2Q9HCC8 539 aa28.32■■■□□ 2.12
NPLOC4-217ENST00000574897 DDB1Q16531 1140 aa28.31■■■□□ 2.12
NPLOC4-217ENST00000574897 USPL1Q5W0Q7 1092 aa28.31■■■□□ 2.12
NPLOC4-217ENST00000574897 SMC3Q9UQE7 1217 aa28.31■■■□□ 2.12
NPLOC4-217ENST00000574897 LAMA4Q16363 1823 aa28.31■■■□□ 2.12
NPLOC4-217ENST00000574897 PALLDQ8WX93 1383 aa28.31■■■□□ 2.12
NPLOC4-217ENST00000574897 WDR33Q9C0J8 1336 aaKnown RBP28.31■■■□□ 2.12
NPLOC4-217ENST00000574897 TAF7LQ5H9L4 462 aa28.31■■■□□ 2.12
NPLOC4-217ENST00000574897 BLOC1S2Q6QNY1 142 aa28.31■■■□□ 2.12
NPLOC4-217ENST00000574897 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.31■■■□□ 2.12
NPLOC4-217ENST00000574897 IFIT5Q13325 482 aaKnown RBP28.3■■■□□ 2.12
NPLOC4-217ENST00000574897 GREM2Q9H772 168 aa28.3■■■□□ 2.12
NPLOC4-217ENST00000574897 SYT1P21579 422 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 835.2 ms