RNA–Protein interactions for RNA: ENST00000574544.1

ABR-229, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5

Gene ABR, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-229ENST00000574544 DCAF8Q5TAQ9 597 aa11.35□□□□□ -0.59
ABR-229ENST00000574544 SUPT20HQ8NEM7 779 aa11.35□□□□□ -0.59
ABR-229ENST00000574544 CLEC11AQ9Y240 323 aa11.35□□□□□ -0.59
ABR-229ENST00000574544 LAMB4A4D0S4 1761 aa11.34□□□□□ -0.59
ABR-229ENST00000574544 NEURL1BA8MQ27 555 aa11.34□□□□□ -0.59
ABR-229ENST00000574544 AOC3Q16853 763 aa11.34□□□□□ -0.59
ABR-229ENST00000574544 UBE3BQ7Z3V4 1068 aa11.34□□□□□ -0.59
ABR-229ENST00000574544 NIM1KQ8IY84 436 aa11.34□□□□□ -0.59
ABR-229ENST00000574544 PSMD1Q99460 953 aa11.34□□□□□ -0.59
ABR-229ENST00000574544 GCKRQ14397 625 aa11.33□□□□□ -0.6
ABR-229ENST00000574544 EAPPQ56P03 285 aaPredicted RBP11.33□□□□□ -0.6
ABR-229ENST00000574544 ANKRD18AQ8IVF6 992 aa11.33□□□□□ -0.6
ABR-229ENST00000574544 LINS1Q8NG48 757 aa11.33□□□□□ -0.6
ABR-229ENST00000574544 BCL2L13Q9BXK5 485 aa11.33□□□□□ -0.6
ABR-229ENST00000574544 C9orf78Q9NZ63 289 aaPredicted RBP11.33□□□□□ -0.6
ABR-229ENST00000574544 ANKIB1Q9P2G1 1089 aa11.33□□□□□ -0.6
ABR-229ENST00000574544 CHMP3Q9Y3E7 222 aa11.33□□□□□ -0.6
ABR-229ENST00000574544 BCORQ6W2J9 1755 aa11.33□□□□□ -0.6
ABR-229ENST00000574544 ZC3H4Q9UPT8 1303 aaKnown RBP11.33□□□□□ -0.6
ABR-229ENST00000574544 NUP98P52948 1817 aa11.32□□□□□ -0.6
ABR-229ENST00000574544 SLX4Q8IY92 1834 aa11.32□□□□□ -0.6
ABR-229ENST00000574544 H7C1W4 665 aa11.32□□□□□ -0.6
ABR-229ENST00000574544 GPSM2P81274 684 aa11.32□□□□□ -0.6
ABR-229ENST00000574544 WASHC4Q2M389 1173 aa11.32□□□□□ -0.6
ABR-229ENST00000574544 TMC4Q7Z404 712 aa11.32□□□□□ -0.6
ABR-229ENST00000574544 ZNF521Q96K83 1311 aa11.32□□□□□ -0.6
ABR-229ENST00000574544 ANKRD31Q8N7Z5 1873 aa11.32□□□□□ -0.6
ABR-229ENST00000574544 UTRNP46939 3433 aa11.31□□□□□ -0.6
ABR-229ENST00000574544 POTECB2RU33 542 aa11.31□□□□□ -0.6
ABR-229ENST00000574544 FZD9O00144 591 aa11.31□□□□□ -0.6
ABR-229ENST00000574544 HSPA6P17066 643 aa11.31□□□□□ -0.6
ABR-229ENST00000574544 HNRNPUQ00839 825 aaKnown RBP eCLIP11.31□□□□□ -0.6
ABR-229ENST00000574544 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
ABR-229ENST00000574544 BEND3Q5T5X7 828 aa11.31□□□□□ -0.6
ABR-229ENST00000574544 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
ABR-229ENST00000574544 TTLL11Q8NHH1 800 aa11.31□□□□□ -0.6
ABR-229ENST00000574544 RBM46Q8TBY0 533 aaKnown RBP11.31□□□□□ -0.6
ABR-229ENST00000574544 ZC3H12CQ9C0D7 883 aaKnown RBP11.31□□□□□ -0.6
ABR-229ENST00000574544 ZNF541Q9H0D2 1346 aa11.31□□□□□ -0.6
ABR-229ENST00000574544 IQCA1LA6NCM1 817 aa11.3□□□□□ -0.6
ABR-229ENST00000574544 RAD17O75943 681 aa11.3□□□□□ -0.6
ABR-229ENST00000574544 LMOD1P29536 600 aaPredicted RBP11.3□□□□□ -0.6
ABR-229ENST00000574544 CTSWP56202 376 aa11.3□□□□□ -0.6
ABR-229ENST00000574544 SMC1BQ8NDV3 1235 aa11.3□□□□□ -0.6
ABR-229ENST00000574544 SSH1Q8WYL5 1049 aa11.3□□□□□ -0.6
ABR-229ENST00000574544 GPR101Q96P66 508 aaPredicted RBP11.3□□□□□ -0.6
ABR-229ENST00000574544 CDC5LQ99459 802 aaKnown RBP11.3□□□□□ -0.6
ABR-229ENST00000574544 EYA3Q99504 573 aa11.3□□□□□ -0.6
ABR-229ENST00000574544 SRCIN1Q9C0H9 1055 aa11.3□□□□□ -0.6
ABR-229ENST00000574544 GREM2Q9H772 168 aa11.3□□□□□ -0.6
ABR-229ENST00000574544 HACL1Q9UJ83 578 aa11.3□□□□□ -0.6
ABR-229ENST00000574544 ZNRF3Q9ULT6 936 aa11.3□□□□□ -0.6
ABR-229ENST00000574544 RIC1Q4ADV7 1423 aa11.29□□□□□ -0.6
ABR-229ENST00000574544 IGHMBP2P38935 993 aaKnown RBP11.29□□□□□ -0.6
ABR-229ENST00000574544 GPC2Q8N158 579 aa11.29□□□□□ -0.6
ABR-229ENST00000574544 MPHOSPH8Q99549 860 aa11.29□□□□□ -0.6
ABR-229ENST00000574544 VPS33BQ9H267 617 aa11.29□□□□□ -0.6
ABR-229ENST00000574544 DBNDD1Q9H9R9 158 aa11.29□□□□□ -0.6
ABR-229ENST00000574544 SMC4Q9NTJ3 1288 aa11.29□□□□□ -0.6
ABR-229ENST00000574544 POLLQ9UGP5 575 aa11.29□□□□□ -0.6
ABR-229ENST00000574544 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
ABR-229ENST00000574544 ARFGEF1Q9Y6D6 1849 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 UFL1O94874 794 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 POTEIP0CG38 1075 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 POTEJP0CG39 1038 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 ITGA6P23229 1130 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 EPHX2P34913 555 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 HTRA3P83110 453 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 CXCL9Q07325 125 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 KIAA2012Q0VF49 1180 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 FSTL1Q12841 308 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 TNIP1Q15025 636 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 TAF7LQ5H9L4 462 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 CIAPIN1Q6FI81 312 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 TBC1D16Q8TBP0 767 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 RTFDC1Q9BY42 306 aaPredicted RBP11.28□□□□□ -0.6
ABR-229ENST00000574544 TAF1DQ9H5J8 278 aaPredicted RBP11.28□□□□□ -0.6
ABR-229ENST00000574544 GGA1Q9UJY5 639 aa11.28□□□□□ -0.6
ABR-229ENST00000574544 GOLGB1Q14789 3259 aaKnown RBP11.27□□□□□ -0.6
ABR-229ENST00000574544 BRCA1P38398 1863 aaKnown RBP11.27□□□□□ -0.6
ABR-229ENST00000574544 ANKRD18BA2A2Z9 1011 aa11.27□□□□□ -0.61
ABR-229ENST00000574544 GRM8O00222 908 aa11.27□□□□□ -0.61
ABR-229ENST00000574544 PLIN1O60240 522 aa11.27□□□□□ -0.61
ABR-229ENST00000574544 ALDH1L1O75891 902 aa11.27□□□□□ -0.61
ABR-229ENST00000574544 EPS15P42566 896 aa11.27□□□□□ -0.61
ABR-229ENST00000574544 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
ABR-229ENST00000574544 LMBR1LQ6UX01 489 aa11.27□□□□□ -0.61
ABR-229ENST00000574544 NOB1Q9ULX3 412 aaKnown RBP11.27□□□□□ -0.61
ABR-229ENST00000574544 COL11A2P13942 1736 aaPredicted RBP11.26□□□□□ -0.61
ABR-229ENST00000574544 ATP2B4P23634 1241 aa11.26□□□□□ -0.61
ABR-229ENST00000574544 KCNJ4P48050 445 aa11.26□□□□□ -0.61
ABR-229ENST00000574544 APLP1P51693 650 aa11.26□□□□□ -0.61
ABR-229ENST00000574544 IFIT5Q13325 482 aaKnown RBP11.26□□□□□ -0.61
ABR-229ENST00000574544 CCDC57Q2TAC2 916 aa11.26□□□□□ -0.61
ABR-229ENST00000574544 ALDH1L2Q3SY69 923 aa11.26□□□□□ -0.61
ABR-229ENST00000574544 RBM26Q5T8P6 1007 aaKnown RBP11.26□□□□□ -0.61
ABR-229ENST00000574544 PNMA8AQ86V59 439 aaPredicted RBP11.26□□□□□ -0.61
ABR-229ENST00000574544 TRMT2AQ8IZ69 625 aaKnown RBP11.26□□□□□ -0.61
ABR-229ENST00000574544 KCNQ5Q9NR82 932 aa11.26□□□□□ -0.61
ABR-229ENST00000574544 BSDC1Q9NW68 430 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms