RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 CSF1RP07333 972 aa21.78■■□□□ 1.08
LITAF-212ENST00000573332 NBPF7P0C2Y1 421 aaPredicted RBP21.78■■□□□ 1.08
LITAF-212ENST00000573332 RTL9Q8NET4 1388 aa21.77■■□□□ 1.08
LITAF-212ENST00000573332 GRAPQ13588 217 aa21.77■■□□□ 1.08
LITAF-212ENST00000573332 SOGA3Q5TF21 947 aa21.77■■□□□ 1.08
LITAF-212ENST00000573332 GRAPLQ8TC17 118 aaPredicted RBP21.77■■□□□ 1.08
LITAF-212ENST00000573332 TNNQ9UQP3 1299 aa21.77■■□□□ 1.08
LITAF-212ENST00000573332 FOXO4P98177 505 aa21.76■■□□□ 1.07
LITAF-212ENST00000573332 ARFGEF1Q9Y6D6 1849 aa21.76■■□□□ 1.07
LITAF-212ENST00000573332 C21orf2O43822 256 aa21.75■■□□□ 1.07
LITAF-212ENST00000573332 CC2D2BQ6DHV5 1058 aa21.75■■□□□ 1.07
LITAF-212ENST00000573332 TMC4Q7Z404 712 aa21.75■■□□□ 1.07
LITAF-212ENST00000573332 DZIP1LQ8IYY4 767 aaKnown RBP21.75■■□□□ 1.07
LITAF-212ENST00000573332 CLUAP1Q96AJ1 413 aa21.75■■□□□ 1.07
LITAF-212ENST00000573332 MS4A1P11836 297 aa21.74■■□□□ 1.07
LITAF-212ENST00000573332 KAZALD1Q96I82 304 aa21.74■■□□□ 1.07
LITAF-212ENST00000573332 SLX4Q8IY92 1834 aa21.73■■□□□ 1.07
LITAF-212ENST00000573332 PPEF1O14829 653 aaPredicted RBP21.73■■□□□ 1.07
LITAF-212ENST00000573332 RPS8P62241 208 aaKnown RBP21.73■■□□□ 1.07
LITAF-212ENST00000573332 GRIPAP1Q4V328 841 aa21.73■■□□□ 1.07
LITAF-212ENST00000573332 EPHA10Q5JZY3 1008 aa21.73■■□□□ 1.07
LITAF-212ENST00000573332 ARHGAP27Q6ZUM4 889 aa21.73■■□□□ 1.07
LITAF-212ENST00000573332 CELF1Q92879 486 aaKnown RBP21.73■■□□□ 1.07
LITAF-212ENST00000573332 SUCLG2Q96I99 432 aa21.73■■□□□ 1.07
LITAF-212ENST00000573332 ATP6V0A2Q9Y487 856 aa21.73■■□□□ 1.07
LITAF-212ENST00000573332 RABL6Q3YEC7 729 aaPredicted RBP21.72■■□□□ 1.07
LITAF-212ENST00000573332 CCDC93Q567U6 631 aa21.72■■□□□ 1.07
LITAF-212ENST00000573332 SP8Q8IXZ3 490 aa21.72■■□□□ 1.07
LITAF-212ENST00000573332 FTSJ3Q8IY81 847 aaKnown RBP21.72■■□□□ 1.07
LITAF-212ENST00000573332 TMEM57Q8N5G2 664 aa21.72■■□□□ 1.07
LITAF-212ENST00000573332 GREM2Q9H772 168 aa21.72■■□□□ 1.07
LITAF-212ENST00000573332 SEC31BQ9NQW1 1179 aa21.72■■□□□ 1.07
LITAF-212ENST00000573332 HDAC5Q9UQL6 1122 aa21.72■■□□□ 1.07
LITAF-212ENST00000573332 LMBR1LQ6UX01 489 aa21.71■■□□□ 1.07
LITAF-212ENST00000573332 RTKN2Q8IZC4 609 aa21.71■■□□□ 1.07
LITAF-212ENST00000573332 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.71■■□□□ 1.07
LITAF-212ENST00000573332 CDC5LQ99459 802 aaKnown RBP21.71■■□□□ 1.07
LITAF-212ENST00000573332 ZNF219Q9P2Y4 722 aaPredicted RBP21.71■■□□□ 1.07
LITAF-212ENST00000573332 LTBP3Q9NS15 1303 aa21.71■■□□□ 1.07
LITAF-212ENST00000573332 SNED1Q8TER0 1413 aa21.71■■□□□ 1.07
LITAF-212ENST00000573332 GNAI3P08754 354 aa21.7■■□□□ 1.06
LITAF-212ENST00000573332 UBTFL1P0CB47 393 aaPredicted RBP21.7■■□□□ 1.06
LITAF-212ENST00000573332 RLBP1P12271 317 aa21.7■■□□□ 1.06
LITAF-212ENST00000573332 CCDC85AQ96PX6 553 aaPredicted RBP21.7■■□□□ 1.06
LITAF-212ENST00000573332 NFKBIEO00221 500 aa21.69■■□□□ 1.06
LITAF-212ENST00000573332 ITGA6P23229 1130 aa21.69■■□□□ 1.06
LITAF-212ENST00000573332 MEIS3Q99687 375 aa21.69■■□□□ 1.06
LITAF-212ENST00000573332 BICC1Q9H694 974 aaKnown RBP21.69■■□□□ 1.06
LITAF-212ENST00000573332 PDE3AQ14432 1141 aa21.68■■□□□ 1.06
LITAF-212ENST00000573332 FAM161AQ3B820 660 aa21.68■■□□□ 1.06
LITAF-212ENST00000573332 ANKRD18AQ8IVF6 992 aa21.68■■□□□ 1.06
LITAF-212ENST00000573332 ANKRD44Q8N8A2 993 aa21.68■■□□□ 1.06
LITAF-212ENST00000573332 TMX4Q9H1E5 349 aaPredicted RBP21.68■■□□□ 1.06
LITAF-212ENST00000573332 GOLGB1Q14789 3259 aaKnown RBP21.68■■□□□ 1.06
LITAF-212ENST00000573332 OLFM4Q6UX06 510 aa21.67■■□□□ 1.06
LITAF-212ENST00000573332 PSMD1Q99460 953 aa21.67■■□□□ 1.06
LITAF-212ENST00000573332 ANKRD18BA2A2Z9 1011 aa21.66■■□□□ 1.06
LITAF-212ENST00000573332 PLIN1O60240 522 aa21.66■■□□□ 1.06
LITAF-212ENST00000573332 FKBP4Q02790 459 aaKnown RBP eCLIP21.66■■□□□ 1.06
LITAF-212ENST00000573332 IFIT5Q13325 482 aaKnown RBP21.66■■□□□ 1.06
LITAF-212ENST00000573332 PANK1Q8TE04 598 aa21.66■■□□□ 1.06
LITAF-212ENST00000573332 TAOK3Q9H2K8 898 aa21.66■■□□□ 1.06
LITAF-212ENST00000573332 BSDC1Q9NW68 430 aaPredicted RBP21.66■■□□□ 1.06
LITAF-212ENST00000573332 MYH3P11055 1940 aa21.65■■□□□ 1.06
LITAF-212ENST00000573332 ZBTB7BO15156 539 aaPredicted RBP21.65■■□□□ 1.06
LITAF-212ENST00000573332 CCDC57Q2TAC2 916 aa21.65■■□□□ 1.06
LITAF-212ENST00000573332 COL4A1P02462 1669 aa21.65■■□□□ 1.06
LITAF-212ENST00000573332 IGHMBP2P38935 993 aaKnown RBP21.64■■□□□ 1.05
LITAF-212ENST00000573332 RASSF7Q02833 373 aa21.64■■□□□ 1.05
LITAF-212ENST00000573332 ITPRIPQ8IWB1 547 aa21.64■■□□□ 1.05
LITAF-212ENST00000573332 RTFDC1Q9BY42 306 aaPredicted RBP21.64■■□□□ 1.05
LITAF-212ENST00000573332 CHMP3Q9Y3E7 222 aa21.64■■□□□ 1.05
LITAF-212ENST00000573332 LRRFIP2Q9Y608 721 aaKnown RBP21.64■■□□□ 1.05
LITAF-212ENST00000573332 LMNB1P20700 586 aa21.63■■□□□ 1.05
LITAF-212ENST00000573332 SLC51AQ86UW1 340 aa21.63■■□□□ 1.05
LITAF-212ENST00000573332 MPNDQ8N594 471 aa21.63■■□□□ 1.05
LITAF-212ENST00000573332 PODXL2Q9NZ53 605 aa21.63■■□□□ 1.05
LITAF-212ENST00000573332 CACNA1SQ13698 1873 aa21.62■■□□□ 1.05
LITAF-212ENST00000573332 FER1L6Q2WGJ9 1857 aa21.62■■□□□ 1.05
LITAF-212ENST00000573332 GNAI2P04899 355 aa21.62■■□□□ 1.05
LITAF-212ENST00000573332 PRELPP51888 382 aa21.62■■□□□ 1.05
LITAF-212ENST00000573332 MVPQ14764 893 aaKnown RBP21.62■■□□□ 1.05
LITAF-212ENST00000573332 VPS33BQ9H267 617 aa21.62■■□□□ 1.05
LITAF-212ENST00000573332 LRRC37AA6NMS7 1700 aa21.61■■□□□ 1.05
LITAF-212ENST00000573332 RRP1P56182 461 aaKnown RBP21.61■■□□□ 1.05
LITAF-212ENST00000573332 MTX1Q13505 466 aa21.61■■□□□ 1.05
LITAF-212ENST00000573332 DPP8Q6V1X1 898 aaPredicted RBP21.61■■□□□ 1.05
LITAF-212ENST00000573332 SUPT20HQ8NEM7 779 aa21.61■■□□□ 1.05
LITAF-212ENST00000573332 MPHOSPH8Q99549 860 aa21.61■■□□□ 1.05
LITAF-212ENST00000573332 DDX19BQ9UMR2 479 aa21.61■■□□□ 1.05
LITAF-212ENST00000573332 MINPP1Q9UNW1 487 aa21.61■■□□□ 1.05
LITAF-212ENST00000573332 TAF1P21675 1872 aa21.6■■□□□ 1.05
LITAF-212ENST00000573332 C9orf131Q5VYM1 1079 aa21.6■■□□□ 1.05
LITAF-212ENST00000573332 UTRNP46939 3433 aa21.6■■□□□ 1.05
LITAF-212ENST00000573332 RFX5P48382 616 aaPredicted RBP21.59■■□□□ 1.05
LITAF-212ENST00000573332 GPSM2P81274 684 aa21.59■■□□□ 1.05
LITAF-212ENST00000573332 C20orf194Q5TEA3 1177 aa21.59■■□□□ 1.05
LITAF-212ENST00000573332 CHMP4BQ9H444 224 aaKnown RBP21.59■■□□□ 1.05
LITAF-212ENST00000573332 NSFL1CQ9UNZ2 370 aaKnown RBP21.59■■□□□ 1.05
LITAF-212ENST00000573332 COG6Q9Y2V7 657 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms