RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 GPC2Q8N158 579 aa12.43□□□□□ -0.42
NPLOC4-212ENST00000573328 TAF1DQ9H5J8 278 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-212ENST00000573328 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
NPLOC4-212ENST00000573328 ADAMTSL1Q8N6G6 1762 aa12.43□□□□□ -0.42
NPLOC4-212ENST00000573328 LTBP1Q14766 1721 aa12.42□□□□□ -0.42
NPLOC4-212ENST00000573328 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-212ENST00000573328 BBOX1O75936 387 aa12.42□□□□□ -0.42
NPLOC4-212ENST00000573328 EPHX2P34913 555 aa12.42□□□□□ -0.42
NPLOC4-212ENST00000573328 LDHDQ86WU2 507 aa12.42□□□□□ -0.42
NPLOC4-212ENST00000573328 WWC1Q8IX03 1113 aa12.42□□□□□ -0.42
NPLOC4-212ENST00000573328 MPNDQ8N594 471 aa12.42□□□□□ -0.42
NPLOC4-212ENST00000573328 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
NPLOC4-212ENST00000573328 KLRG1Q96E93 195 aa12.42□□□□□ -0.42
NPLOC4-212ENST00000573328 HSP90B1P14625 803 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-212ENST00000573328 TWISTNBQ3B726 338 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-212ENST00000573328 TMC4Q7Z404 712 aa12.41□□□□□ -0.42
NPLOC4-212ENST00000573328 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
NPLOC4-212ENST00000573328 DNAJC5GQ8N7S2 189 aa12.41□□□□□ -0.42
NPLOC4-212ENST00000573328 TRPM7Q96QT4 1865 aa12.41□□□□□ -0.42
NPLOC4-212ENST00000573328 DUOX1Q9NRD9 1551 aa12.41□□□□□ -0.42
NPLOC4-212ENST00000573328 TRIM28Q13263 835 aaKnown RBP12.4□□□□□ -0.42
NPLOC4-212ENST00000573328 PNMA8AQ86V59 439 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-212ENST00000573328 FAM9BQ8IZU0 186 aa12.4□□□□□ -0.42
NPLOC4-212ENST00000573328 ZBTB38Q8NAP3 1195 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-212ENST00000573328 CWC25Q9NXE8 425 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-212ENST00000573328 MAP3K2Q9Y2U5 619 aa12.4□□□□□ -0.42
NPLOC4-212ENST00000573328 COL4A1P02462 1669 aa12.4□□□□□ -0.42
NPLOC4-212ENST00000573328 IL16Q14005 1332 aa12.39□□□□□ -0.43
NPLOC4-212ENST00000573328 NEXNQ0ZGT2 675 aa12.39□□□□□ -0.43
NPLOC4-212ENST00000573328 SF3B3Q15393 1217 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-212ENST00000573328 CCDC191Q8NCU4 936 aa12.39□□□□□ -0.43
NPLOC4-212ENST00000573328 CELF1Q92879 486 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-212ENST00000573328 METTL22Q9BUU2 404 aaPredicted RBP12.39□□□□□ -0.43
NPLOC4-212ENST00000573328 VPS33BQ9H267 617 aa12.39□□□□□ -0.43
NPLOC4-212ENST00000573328 FANCIQ9NVI1 1328 aa12.38□□□□□ -0.43
NPLOC4-212ENST00000573328 PI4KAP2A4QPH2 592 aa12.38□□□□□ -0.43
NPLOC4-212ENST00000573328 PCCAP05165 728 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-212ENST00000573328 PI4KAP1Q8N8J0 262 aa12.38□□□□□ -0.43
NPLOC4-212ENST00000573328 JARID2Q92833 1246 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-212ENST00000573328 RTFDC1Q9BY42 306 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-212ENST00000573328 ZNRF3Q9ULT6 936 aa12.38□□□□□ -0.43
NPLOC4-212ENST00000573328 NSFL1CQ9UNZ2 370 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-212ENST00000573328 PCNTO95613 3336 aa12.37□□□□□ -0.43
NPLOC4-212ENST00000573328 C6orf229H3BNL8 230 aa12.37□□□□□ -0.43
NPLOC4-212ENST00000573328 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
NPLOC4-212ENST00000573328 SCNN1DP51172 638 aa12.37□□□□□ -0.43
NPLOC4-212ENST00000573328 KIAA2012Q0VF49 1180 aa12.37□□□□□ -0.43
NPLOC4-212ENST00000573328 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
NPLOC4-212ENST00000573328 MAP1SQ66K74 1059 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-212ENST00000573328 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
NPLOC4-212ENST00000573328 CCDC85AQ96PX6 553 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-212ENST00000573328 BCL2L13Q9BXK5 485 aa12.37□□□□□ -0.43
NPLOC4-212ENST00000573328 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
NPLOC4-212ENST00000573328 PDE8AO60658 829 aa12.36□□□□□ -0.43
NPLOC4-212ENST00000573328 RAD17O75943 681 aa12.36□□□□□ -0.43
NPLOC4-212ENST00000573328 EPS15P42566 896 aa12.36□□□□□ -0.43
NPLOC4-212ENST00000573328 FKBP5Q13451 457 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-212ENST00000573328 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
NPLOC4-212ENST00000573328 NCBP3Q53F19 620 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-212ENST00000573328 CIAPIN1Q6FI81 312 aa12.36□□□□□ -0.43
NPLOC4-212ENST00000573328 WDR63Q8IWG1 891 aa12.36□□□□□ -0.43
NPLOC4-212ENST00000573328 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-212ENST00000573328 PSME4Q14997 1843 aa12.36□□□□□ -0.43
NPLOC4-212ENST00000573328 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 RPS8P62241 208 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 GPSM2P81274 684 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 CXCL9Q07325 125 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 FLIIQ13045 1269 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 TNIP1Q15025 636 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 G2E3Q7L622 706 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 JMYQ8N9B5 988 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 EYA3Q99504 573 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 SEC31BQ9NQW1 1179 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 ANKIB1Q9P2G1 1089 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 SCN9AQ15858 1988 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 PASKQ96RG2 1323 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 CDHR2Q9BYE9 1310 aa12.35□□□□□ -0.43
NPLOC4-212ENST00000573328 TMEM88BA6NKF7 163 aa12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 G3V3G9 751 aa12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 IGKV5-2P06315 115 aa12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 CWF19L2Q2TBE0 894 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 USP50Q70EL3 339 aaPredicted RBP12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 ADARB2Q9NS39 739 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 GPRC5DQ9NZD1 345 aa12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 POLR2AP24928 1970 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-212ENST00000573328 NEURL1BA8MQ27 555 aa12.33□□□□□ -0.44
NPLOC4-212ENST00000573328 UFL1O94874 794 aa12.33□□□□□ -0.44
NPLOC4-212ENST00000573328 CTSWP56202 376 aa12.33□□□□□ -0.44
NPLOC4-212ENST00000573328 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-212ENST00000573328 CDC5LQ99459 802 aaKnown RBP12.33□□□□□ -0.44
NPLOC4-212ENST00000573328 MYH16Q9H6N6 1097 aa12.33□□□□□ -0.44
NPLOC4-212ENST00000573328 POLLQ9UGP5 575 aa12.33□□□□□ -0.44
NPLOC4-212ENST00000573328 YDJCA8MPS7 323 aa12.32□□□□□ -0.44
NPLOC4-212ENST00000573328 ECE2O60344 883 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms