RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PARP3Q9Y6F1 533 aa8.54□□□□□ -1.04
SF3B3-214ENST00000572365 LRRIQ1Q96JM4 1722 aa8.54□□□□□ -1.04
SF3B3-214ENST00000572365 TNRQ92752 1358 aa8.53□□□□□ -1.04
SF3B3-214ENST00000572365 MPSTP25325 297 aa8.53□□□□□ -1.04
SF3B3-214ENST00000572365 SMCPP49901 116 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-214ENST00000572365 C4orf17Q53FE4 359 aa8.53□□□□□ -1.04
SF3B3-214ENST00000572365 MEX3CQ5U5Q3 659 aaKnown RBP8.53□□□□□ -1.04
SF3B3-214ENST00000572365 THEMISQ8N1K5 641 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-214ENST00000572365 HCN4Q9Y3Q4 1203 aa8.53□□□□□ -1.04
SF3B3-214ENST00000572365 BMP2P12643 396 aa8.52□□□□□ -1.05
SF3B3-214ENST00000572365 CTC1Q2NKJ3 1217 aa8.52□□□□□ -1.05
SF3B3-214ENST00000572365 WDR44Q5JSH3 913 aa8.52□□□□□ -1.05
SF3B3-214ENST00000572365 RNF217Q8TC41 542 aa8.52□□□□□ -1.05
SF3B3-214ENST00000572365 NGLY1Q96IV0 654 aa8.52□□□□□ -1.05
SF3B3-214ENST00000572365 PHACTR1Q9C0D0 580 aa8.52□□□□□ -1.05
SF3B3-214ENST00000572365 DCTN4Q9UJW0 460 aa8.52□□□□□ -1.05
SF3B3-214ENST00000572365 ABCC1P33527 1531 aa8.52□□□□□ -1.05
SF3B3-214ENST00000572365 SAMD9LQ8IVG5 1584 aa8.52□□□□□ -1.05
SF3B3-214ENST00000572365 DGAT1O75907 488 aa8.51□□□□□ -1.05
SF3B3-214ENST00000572365 C6orf118Q5T5N4 469 aa8.51□□□□□ -1.05
SF3B3-214ENST00000572365 C7orf43Q8WVR3 580 aa8.51□□□□□ -1.05
SF3B3-214ENST00000572365 ZDHHC3Q9NYG2 299 aa8.51□□□□□ -1.05
SF3B3-214ENST00000572365 CDC42BPAQ5VT25 1732 aa8.51□□□□□ -1.05
SF3B3-214ENST00000572365 IQGAP1P46940 1657 aa8.5□□□□□ -1.05
SF3B3-214ENST00000572365 KIF3BO15066 747 aa8.5□□□□□ -1.05
SF3B3-214ENST00000572365 BRD2P25440 801 aaKnown RBP8.5□□□□□ -1.05
SF3B3-214ENST00000572365 TXLNAP40222 546 aa8.5□□□□□ -1.05
SF3B3-214ENST00000572365 PLA2G4AP47712 749 aa8.5□□□□□ -1.05
SF3B3-214ENST00000572365 EIF1AXP47813 144 aaKnown RBP8.5□□□□□ -1.05
SF3B3-214ENST00000572365 TROQ12816 1431 aaPredicted RBP8.5□□□□□ -1.05
SF3B3-214ENST00000572365 SCARF1Q14162 830 aa8.5□□□□□ -1.05
SF3B3-214ENST00000572365 C11orf91Q3C1V1 193 aa8.5□□□□□ -1.05
SF3B3-214ENST00000572365 ALKBH2Q6NS38 261 aa8.5□□□□□ -1.05
SF3B3-214ENST00000572365 NBPF10Q6P3W6 841 aaKnown RBP8.5□□□□□ -1.05
SF3B3-214ENST00000572365 CRIPAKQ8N1N5 446 aa8.5□□□□□ -1.05
SF3B3-214ENST00000572365 ABTB2Q8N961 1025 aa8.5□□□□□ -1.05
SF3B3-214ENST00000572365 RNF17Q9BXT8 1623 aaKnown RBP8.5□□□□□ -1.05
SF3B3-214ENST00000572365 ROBO1Q9Y6N7 1651 aa8.49□□□□□ -1.05
SF3B3-214ENST00000572365 NRG2O14511 850 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-214ENST00000572365 MAPK1P28482 360 aa8.49□□□□□ -1.05
SF3B3-214ENST00000572365 RXRBP28702 533 aa8.49□□□□□ -1.05
SF3B3-214ENST00000572365 LTKP29376 864 aa8.49□□□□□ -1.05
SF3B3-214ENST00000572365 NBPF1Q3BBV0 1214 aa8.49□□□□□ -1.05
SF3B3-214ENST00000572365 FAM26DQ5JW98 314 aa8.49□□□□□ -1.05
SF3B3-214ENST00000572365 ASB16Q96NS5 453 aa8.49□□□□□ -1.05
SF3B3-214ENST00000572365 A2MP01023 1474 aa8.49□□□□□ -1.05
SF3B3-214ENST00000572365 ZNF644Q9H582 1327 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-214ENST00000572365 ANKRD33BA6NCL7 494 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 TTLL8A6PVC2 850 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 ZBTB39O15060 712 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 BMP1P13497 986 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 POU4F2Q12837 409 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 DGKZQ13574 1117 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 LYSMD3Q7Z3D4 306 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 PRICKLE2Q7Z3G6 844 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 TRIM46Q7Z4K8 759 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 NPAS4Q8IUM7 802 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 RBCK1Q9BYM8 510 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 KLK14Q9P0G3 267 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 GPC6Q9Y625 555 aaPredicted RBP8.48□□□□□ -1.05
SF3B3-214ENST00000572365 SYCP2Q9BX26 1530 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 SOS2Q07890 1332 aaPredicted RBP8.48□□□□□ -1.05
SF3B3-214ENST00000572365 WASHC2CQ9Y4E1 1318 aa8.48□□□□□ -1.05
SF3B3-214ENST00000572365 PREX2Q70Z35 1606 aa8.47□□□□□ -1.05
SF3B3-214ENST00000572365 PHLPP1O60346 1717 aa8.47□□□□□ -1.05
SF3B3-214ENST00000572365 FZD6O60353 706 aa8.47□□□□□ -1.05
SF3B3-214ENST00000572365 PHKA2P46019 1235 aa8.47□□□□□ -1.05
SF3B3-214ENST00000572365 PKDCCQ504Y2 493 aa8.47□□□□□ -1.05
SF3B3-214ENST00000572365 ZSCAN29Q8IWY8 852 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-214ENST00000572365 ETFBKMTQ8IXQ9 262 aa8.47□□□□□ -1.05
SF3B3-214ENST00000572365 RGL4Q8IZJ4 473 aa8.47□□□□□ -1.05
SF3B3-214ENST00000572365 IFT43Q96FT9 208 aa8.47□□□□□ -1.05
SF3B3-214ENST00000572365 CITED4Q96RK1 184 aa8.47□□□□□ -1.05
SF3B3-214ENST00000572365 UGGT1Q9NYU2 1555 aa8.47□□□□□ -1.05
SF3B3-214ENST00000572365 CLIP1P30622 1438 aa8.46□□□□□ -1.05
SF3B3-214ENST00000572365 RBM47A0AV96 593 aaKnown RBP8.46□□□□□ -1.06
SF3B3-214ENST00000572365 NDUFB5O43674 189 aa8.46□□□□□ -1.06
SF3B3-214ENST00000572365 GFRA3O60609 400 aa8.46□□□□□ -1.06
SF3B3-214ENST00000572365 AIDAQ96BJ3 306 aa8.46□□□□□ -1.06
SF3B3-214ENST00000572365 BCS1LQ9Y276 419 aa8.46□□□□□ -1.06
SF3B3-214ENST00000572365 FAM135BQ49AJ0 1406 aa8.46□□□□□ -1.06
SF3B3-214ENST00000572365 MIA2Q96PC5 1412 aa8.46□□□□□ -1.06
SF3B3-214ENST00000572365 ATP7AQ04656 1500 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 FAM135AQ9P2D6 1515 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 SETBP1Q9Y6X0 1596 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 LRP6O75581 1613 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 AXIN1O15169 862 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 TATP17735 454 aaPredicted RBP8.45□□□□□ -1.06
SF3B3-214ENST00000572365 ATP4AP20648 1035 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 HIF1AQ16665 826 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 ZNF772Q68DY9 489 aaPredicted RBP8.45□□□□□ -1.06
SF3B3-214ENST00000572365 RHPN1Q8TCX5 695 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 ZNF428Q96B54 188 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 SLC26A8Q96RN1 970 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 CCDC87Q9NVE4 849 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 BRPF3Q9ULD4 1205 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 TMEM94Q12767 1356 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 MED14O60244 1454 aa8.45□□□□□ -1.06
SF3B3-214ENST00000572365 A0A1B0GTH6 734 aa8.44□□□□□ -1.06
SF3B3-214ENST00000572365 COL19A1Q14993 1142 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms