RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 TINF2Q9BSI4 451 aa9.93□□□□□ -0.82
CNOT1-222ENST00000570139 NIF3L1Q9GZT8 377 aa9.93□□□□□ -0.82
CNOT1-222ENST00000570139 LRFN2Q9ULH4 789 aa9.93□□□□□ -0.82
CNOT1-222ENST00000570139 NEFLP07196 543 aa9.92□□□□□ -0.82
CNOT1-222ENST00000570139 PCSK2P16519 638 aa9.92□□□□□ -0.82
CNOT1-222ENST00000570139 HIRAP54198 1017 aaPredicted RBP9.92□□□□□ -0.82
CNOT1-222ENST00000570139 SKOR1P84550 965 aa9.92□□□□□ -0.82
CNOT1-222ENST00000570139 POLIQ9UNA4 740 aa9.92□□□□□ -0.82
CNOT1-222ENST00000570139 SERTM1A2A2V5 107 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 LILRA1O75019 489 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 GGCXP38435 758 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 TLR1Q15399 786 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 PPP1R26Q5T8A7 1209 aaPredicted RBP9.91□□□□□ -0.82
CNOT1-222ENST00000570139 ANKLE1Q8NAG6 615 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 ARMC5Q96C12 935 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 CRELD1Q96HD1 420 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 PGPEP1Q9NXJ5 209 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 WWC3Q9ULE0 1092 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 RNF17Q9BXT8 1623 aaKnown RBP9.91□□□□□ -0.82
CNOT1-222ENST00000570139 FRMPD1Q5SYB0 1578 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 REREQ9P2R6 1566 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 TSPOAP1O95153 1857 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 PRDM15P57071 1507 aaPredicted RBP9.91□□□□□ -0.82
CNOT1-222ENST00000570139 PZPP20742 1482 aa9.91□□□□□ -0.82
CNOT1-222ENST00000570139 ABCA6Q8N139 1617 aa9.9□□□□□ -0.82
CNOT1-222ENST00000570139 GRM5P41594 1212 aa9.9□□□□□ -0.82
CNOT1-222ENST00000570139 PTPN5P54829 565 aa9.9□□□□□ -0.82
CNOT1-222ENST00000570139 DNM1Q05193 864 aaKnown RBP9.9□□□□□ -0.82
CNOT1-222ENST00000570139 NR5A1Q13285 461 aa9.9□□□□□ -0.82
CNOT1-222ENST00000570139 RTN1Q16799 776 aa9.9□□□□□ -0.82
CNOT1-222ENST00000570139 ATCAYQ86WG3 371 aa9.9□□□□□ -0.82
CNOT1-222ENST00000570139 XAGE2Q96GT9 111 aa9.9□□□□□ -0.82
CNOT1-222ENST00000570139 CAPN10Q9HC96 672 aa9.9□□□□□ -0.82
CNOT1-222ENST00000570139 ARHGEF10LQ9HCE6 1279 aa9.9□□□□□ -0.82
CNOT1-222ENST00000570139 FAM135AQ9P2D6 1515 aa9.9□□□□□ -0.82
CNOT1-222ENST00000570139 DHX29Q7Z478 1369 aaKnown RBP9.89□□□□□ -0.83
CNOT1-222ENST00000570139 DIP2CQ9Y2E4 1556 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 ZBTB39O15060 712 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 ADH1CP00326 375 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 NCLP19338 710 aaKnown RBP9.89□□□□□ -0.83
CNOT1-222ENST00000570139 ATP2B1P20020 1258 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 RPIAP49247 311 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 C11orf91Q3C1V1 193 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 AFAP1Q8N556 730 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 TTC16Q8NEE8 873 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 NGLY1Q96IV0 654 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 RAB6BQ9NRW1 208 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 PRKAG2Q9UGJ0 569 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 A2MP01023 1474 aa9.89□□□□□ -0.83
CNOT1-222ENST00000570139 TET3O43151 1660 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 ZC3H13Q5T200 1668 aaKnown RBP9.88□□□□□ -0.83
CNOT1-222ENST00000570139 EML1O00423 815 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 ZAP70P43403 619 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 TEAD4Q15561 434 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 IFFO2Q5TF58 517 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 DPH6Q7L8W6 267 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 EDEM1Q92611 657 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 MPHOSPH9Q99550 1183 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 ESYT1Q9BSJ8 1104 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 CUEDC1Q9NWM3 386 aaPredicted RBP9.88□□□□□ -0.83
CNOT1-222ENST00000570139 FAM13BQ9NYF5 915 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 ZNF232Q9UNY5 417 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 IQSEC3Q9UPP2 1182 aaPredicted RBP9.88□□□□□ -0.83
CNOT1-222ENST00000570139 SPG7Q9UQ90 795 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 VWDEQ8N2E2 1590 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 NUP155O75694 1391 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 KANK1Q14678 1352 aa9.88□□□□□ -0.83
CNOT1-222ENST00000570139 PPEF1O14829 653 aaPredicted RBP9.87□□□□□ -0.83
CNOT1-222ENST00000570139 PDGFAP04085 211 aa9.87□□□□□ -0.83
CNOT1-222ENST00000570139 RPLP1P05386 114 aaKnown RBP9.87□□□□□ -0.83
CNOT1-222ENST00000570139 DGKZQ13574 1117 aa9.87□□□□□ -0.83
CNOT1-222ENST00000570139 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
CNOT1-222ENST00000570139 CNKSR1Q969H4 720 aa9.87□□□□□ -0.83
CNOT1-222ENST00000570139 CSRNP1Q96S65 589 aa9.87□□□□□ -0.83
CNOT1-222ENST00000570139 RNF19AQ9NV58 838 aa9.87□□□□□ -0.83
CNOT1-222ENST00000570139 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.87□□□□□ -0.83
CNOT1-222ENST00000570139 EMILIN1Q9Y6C2 1016 aa9.87□□□□□ -0.83
CNOT1-222ENST00000570139 LMTK2Q8IWU2 1503 aa9.87□□□□□ -0.83
CNOT1-222ENST00000570139 ARHGEF40Q8TER5 1519 aa9.87□□□□□ -0.83
CNOT1-222ENST00000570139 RNF223E7ERA6 249 aa9.86□□□□□ -0.83
CNOT1-222ENST00000570139 CD2BP2O95400 341 aaKnown RBP9.86□□□□□ -0.83
CNOT1-222ENST00000570139 IL2RAP01589 272 aa9.86□□□□□ -0.83
CNOT1-222ENST00000570139 ETFBKMTQ8IXQ9 262 aa9.86□□□□□ -0.83
CNOT1-222ENST00000570139 ALDH16A1Q8IZ83 802 aa9.86□□□□□ -0.83
CNOT1-222ENST00000570139 SETDB2Q96T68 719 aa9.86□□□□□ -0.83
CNOT1-222ENST00000570139 DNAJC25Q9H1X3 360 aa9.86□□□□□ -0.83
CNOT1-222ENST00000570139 AK5Q9Y6K8 562 aa9.86□□□□□ -0.83
CNOT1-222ENST00000570139 TLL2Q9Y6L7 1015 aa9.86□□□□□ -0.83
CNOT1-222ENST00000570139 NOS2P35228 1153 aa9.85□□□□□ -0.83
CNOT1-222ENST00000570139 NOP9Q86U38 636 aaKnown RBP9.85□□□□□ -0.83
CNOT1-222ENST00000570139 IFT43Q96FT9 208 aa9.85□□□□□ -0.83
CNOT1-222ENST00000570139 MROH1Q8NDA8 1641 aa9.85□□□□□ -0.83
CNOT1-222ENST00000570139 RPRD2Q5VT52 1461 aaKnown RBP9.85□□□□□ -0.83
CNOT1-222ENST00000570139 AGLP35573 1532 aa9.84□□□□□ -0.83
CNOT1-222ENST00000570139 PPM1GO15355 546 aaPredicted RBP9.84□□□□□ -0.83
CNOT1-222ENST00000570139 ADD1P35611 737 aaKnown RBP9.84□□□□□ -0.83
CNOT1-222ENST00000570139 CLN3Q13286 438 aa9.84□□□□□ -0.83
CNOT1-222ENST00000570139 GMLQ99445 158 aa9.84□□□□□ -0.83
CNOT1-222ENST00000570139 ACBD3Q9H3P7 528 aa9.84□□□□□ -0.83
CNOT1-222ENST00000570139 CABP1Q9NZU7 370 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms