RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 CCDC152Q4G0S7 254 aa15.38■□□□□ 0.05
NUP93-220ENST00000569842 GREM2Q9H772 168 aa15.38■□□□□ 0.05
NUP93-220ENST00000569842 SPON1Q9HCB6 807 aa15.38■□□□□ 0.05
NUP93-220ENST00000569842 RIC1Q4ADV7 1423 aa15.38■□□□□ 0.05
NUP93-220ENST00000569842 SF3B3Q15393 1217 aaKnown RBP15.38■□□□□ 0.05
NUP93-220ENST00000569842 PPP4R2Q9NY27 417 aa15.38■□□□□ 0.05
NUP93-220ENST00000569842 SSH3Q8TE77 659 aa15.37■□□□□ 0.05
NUP93-220ENST00000569842 LAMB2P55268 1798 aa15.36■□□□□ 0.05
NUP93-220ENST00000569842 TNRC6CQ9HCJ0 1690 aaKnown RBP15.36■□□□□ 0.05
NUP93-220ENST00000569842 HMMRO75330 724 aa15.36■□□□□ 0.05
NUP93-220ENST00000569842 PDE6BP35913 854 aa15.36■□□□□ 0.05
NUP93-220ENST00000569842 POLA2Q14181 598 aa15.36■□□□□ 0.05
NUP93-220ENST00000569842 ITGA6P23229 1130 aa15.36■□□□□ 0.05
NUP93-220ENST00000569842 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
NUP93-220ENST00000569842 CCDC57Q2TAC2 916 aa15.36■□□□□ 0.05
NUP93-220ENST00000569842 CCDC136Q96JN2 1154 aa15.36■□□□□ 0.05
NUP93-220ENST00000569842 KLRG2A4D1S0 409 aaPredicted RBP15.35■□□□□ 0.05
NUP93-220ENST00000569842 IGHDP01880 384 aa15.35■□□□□ 0.05
NUP93-220ENST00000569842 CRY2Q49AN0 593 aa15.35■□□□□ 0.05
NUP93-220ENST00000569842 RWDD1Q9H446 243 aaPredicted RBP15.35■□□□□ 0.05
NUP93-220ENST00000569842 SEC31BQ9NQW1 1179 aa15.35■□□□□ 0.05
NUP93-220ENST00000569842 RFX5P48382 616 aaPredicted RBP15.35■□□□□ 0.05
NUP93-220ENST00000569842 HDAC1Q13547 482 aaPredicted RBP15.35■□□□□ 0.05
NUP93-220ENST00000569842 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
NUP93-220ENST00000569842 KLHDC4Q8TBB5 520 aa15.35■□□□□ 0.05
NUP93-220ENST00000569842 C10orf71Q711Q0 1435 aa15.35■□□□□ 0.05
NUP93-220ENST00000569842 RPGRQ92834 1020 aaKnown RBP15.35■□□□□ 0.05
NUP93-220ENST00000569842 PA2G4Q9UQ80 394 aaKnown RBP15.35■□□□□ 0.05
NUP93-220ENST00000569842 MYH3P11055 1940 aa15.34■□□□□ 0.05
NUP93-220ENST00000569842 ANKRD18BA2A2Z9 1011 aa15.34■□□□□ 0.05
NUP93-220ENST00000569842 ZNF594Q96JF6 807 aaPredicted RBP15.34■□□□□ 0.05
NUP93-220ENST00000569842 RTL9Q8NET4 1388 aa15.34■□□□□ 0.05
NUP93-220ENST00000569842 DDX46Q7L014 1031 aaKnown RBP15.34■□□□□ 0.05
NUP93-220ENST00000569842 PPP1R1BQ9UD71 204 aaPredicted RBP15.34■□□□□ 0.05
NUP93-220ENST00000569842 ANKRD31Q8N7Z5 1873 aa15.34■□□□□ 0.05
NUP93-220ENST00000569842 PTPN12Q05209 780 aaKnown RBP15.33■□□□□ 0.04
NUP93-220ENST00000569842 TAF7LQ5H9L4 462 aa15.33■□□□□ 0.04
NUP93-220ENST00000569842 C2CD5Q86YS7 1000 aa15.33■□□□□ 0.04
NUP93-220ENST00000569842 SRGNP10124 158 aa15.33■□□□□ 0.04
NUP93-220ENST00000569842 KLHL34Q8N239 644 aa15.33■□□□□ 0.04
NUP93-220ENST00000569842 H0YIN7 160 aa15.32■□□□□ 0.04
NUP93-220ENST00000569842 CHRNA5P30532 468 aa15.32■□□□□ 0.04
NUP93-220ENST00000569842 SIL1Q9H173 461 aa15.32■□□□□ 0.04
NUP93-220ENST00000569842 SURF6O75683 361 aaKnown RBP15.32■□□□□ 0.04
NUP93-220ENST00000569842 RBM17Q96I25 401 aaKnown RBP15.32■□□□□ 0.04
NUP93-220ENST00000569842 CDC5LQ99459 802 aaKnown RBP15.32■□□□□ 0.04
NUP93-220ENST00000569842 COPRSQ9NQ92 184 aa15.32■□□□□ 0.04
NUP93-220ENST00000569842 NPR1P16066 1061 aa15.31■□□□□ 0.04
NUP93-220ENST00000569842 HOXA10P31260 410 aaPredicted RBP15.31■□□□□ 0.04
NUP93-220ENST00000569842 CELF1Q92879 486 aaKnown RBP15.31■□□□□ 0.04
NUP93-220ENST00000569842 EXOC6BQ9Y2D4 811 aa15.31■□□□□ 0.04
NUP93-220ENST00000569842 DCTPP1Q9H773 170 aa15.31■□□□□ 0.04
NUP93-220ENST00000569842 MASTLQ96GX5 879 aa15.3■□□□□ 0.04
NUP93-220ENST00000569842 IGHMBP2P38935 993 aaKnown RBP15.3■□□□□ 0.04
NUP93-220ENST00000569842 LDHAL6AQ6ZMR3 332 aa15.3■□□□□ 0.04
NUP93-220ENST00000569842 ANKRD18AQ8IVF6 992 aa15.3■□□□□ 0.04
NUP93-220ENST00000569842 ZNF622Q969S3 477 aaKnown RBP eCLIP15.3■□□□□ 0.04
NUP93-220ENST00000569842 PUS3Q9BZE2 481 aaKnown RBP15.3■□□□□ 0.04
NUP93-220ENST00000569842 PDZRN3Q9UPQ7 1066 aa15.3■□□□□ 0.04
NUP93-220ENST00000569842 NOP58Q9Y2X3 529 aaKnown RBP15.3■□□□□ 0.04
NUP93-220ENST00000569842 A0A0G2JLW4 131 aa15.3■□□□□ 0.04
NUP93-220ENST00000569842 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
NUP93-220ENST00000569842 GRAPQ13588 217 aa15.3■□□□□ 0.04
NUP93-220ENST00000569842 GRAPLQ8TC17 118 aaPredicted RBP15.3■□□□□ 0.04
NUP93-220ENST00000569842 CRAMP1Q96RY5 1269 aa15.3■□□□□ 0.04
NUP93-220ENST00000569842 CD2APQ9Y5K6 639 aa15.3■□□□□ 0.04
NUP93-220ENST00000569842 COL4A1P02462 1669 aa15.29■□□□□ 0.04
NUP93-220ENST00000569842 APBB1O00213 710 aa15.29■□□□□ 0.04
NUP93-220ENST00000569842 DPEP1P16444 411 aa15.29■□□□□ 0.04
NUP93-220ENST00000569842 G3BP1Q13283 466 aaKnown RBP eCLIP15.29■□□□□ 0.043e-6■■■■□ 21.6
NUP93-220ENST00000569842 OS9Q13438 667 aaPredicted RBP15.29■□□□□ 0.04
NUP93-220ENST00000569842 LRRC24Q50LG9 513 aa15.29■□□□□ 0.04
NUP93-220ENST00000569842 MPHOSPH8Q99549 860 aa15.29■□□□□ 0.04
NUP93-220ENST00000569842 EYA2O00167 538 aa15.29■□□□□ 0.04
NUP93-220ENST00000569842 TGFB2P61812 414 aa15.29■□□□□ 0.04
NUP93-220ENST00000569842 CNNM1Q9NRU3 951 aa15.29■□□□□ 0.04
NUP93-220ENST00000569842 STYK1Q6J9G0 422 aa15.28■□□□□ 0.04
NUP93-220ENST00000569842 GCC1Q96CN9 775 aa15.28■□□□□ 0.04
NUP93-220ENST00000569842 KDM2BQ8NHM5 1336 aa15.28■□□□□ 0.04
NUP93-220ENST00000569842 COL11A2P13942 1736 aaPredicted RBP15.28■□□□□ 0.04
NUP93-220ENST00000569842 ALDH1B1P30837 517 aa15.28■□□□□ 0.04
NUP93-220ENST00000569842 HSP90AB4PQ58FF6 505 aa15.27■□□□□ 0.04
NUP93-220ENST00000569842 ATG9AQ7Z3C6 839 aa15.27■□□□□ 0.04
NUP93-220ENST00000569842 SMC5Q8IY18 1101 aa15.27■□□□□ 0.04
NUP93-220ENST00000569842 BSDC1Q9NW68 430 aaPredicted RBP15.27■□□□□ 0.04
NUP93-220ENST00000569842 TAF1P21675 1872 aa15.27■□□□□ 0.04
NUP93-220ENST00000569842 CIAO1O76071 339 aa15.27■□□□□ 0.03
NUP93-220ENST00000569842 CENPQQ7L2Z9 268 aaPredicted RBP15.27■□□□□ 0.03
NUP93-220ENST00000569842 KIF13BQ9NQT8 1826 aa15.27■□□□□ 0.03
NUP93-220ENST00000569842 BBOX1O75936 387 aa15.26■□□□□ 0.03
NUP93-220ENST00000569842 KCNA3P22001 575 aa15.26■□□□□ 0.03
NUP93-220ENST00000569842 FBXO3Q9UK99 471 aa15.26■□□□□ 0.03
NUP93-220ENST00000569842 RIPOR2Q9Y4F9 1068 aa15.26■□□□□ 0.03
NUP93-220ENST00000569842 IL15P40933 162 aaPredicted RBP15.26■□□□□ 0.03
NUP93-220ENST00000569842 CNKSR1Q969H4 720 aa15.26■□□□□ 0.03
NUP93-220ENST00000569842 SRCAPQ6ZRS2 3230 aa15.26■□□□□ 0.03
NUP93-220ENST00000569842 RAB11FIP3O75154 756 aa15.25■□□□□ 0.03
NUP93-220ENST00000569842 FHDC1Q9C0D6 1143 aaPredicted RBP15.25■□□□□ 0.03
NUP93-220ENST00000569842 BCL11AQ9H165 835 aa15.25■□□□□ 0.03
NUP93-220ENST00000569842 SASH1O94885 1247 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms