RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 RPUSD2Q8IZ73 545 aaKnown RBP7.62□□□□□ -1.19
KARS-211ENST00000569298 CACTIN-AS1Q8N1I8 211 aa7.62□□□□□ -1.19
KARS-211ENST00000569298 NBPF15Q8N660 670 aa7.62□□□□□ -1.19
KARS-211ENST00000569298 NFATC2IPQ8NCF5 419 aa7.62□□□□□ -1.19
KARS-211ENST00000569298 CCDC191Q8NCU4 936 aa7.62□□□□□ -1.19
KARS-211ENST00000569298 CXorf38Q8TB03 319 aa7.62□□□□□ -1.19
KARS-211ENST00000569298 HLA-CQ95604 372 aa7.62□□□□□ -1.19
KARS-211ENST00000569298 USB1Q9BQ65 265 aaKnown RBP7.62□□□□□ -1.19
KARS-211ENST00000569298 LZTS2Q9BRK4 669 aa7.62□□□□□ -1.19
KARS-211ENST00000569298 UBXN6Q9BZV1 441 aa7.62□□□□□ -1.19
KARS-211ENST00000569298 RIPOR2Q9Y4F9 1068 aa7.62□□□□□ -1.19
KARS-211ENST00000569298 KIF21BO75037 1637 aa7.62□□□□□ -1.19
KARS-211ENST00000569298 CT47B1P0C2W7 299 aaPredicted RBP7.61□□□□□ -1.19
KARS-211ENST00000569298 GCFC2P16383 781 aaKnown RBP7.61□□□□□ -1.19
KARS-211ENST00000569298 RDXP35241 583 aaKnown RBP7.61□□□□□ -1.19
KARS-211ENST00000569298 MMP16P51512 607 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 RPS6KA3P51812 740 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 MRPL12P52815 198 aaKnown RBP7.61□□□□□ -1.19
KARS-211ENST00000569298 GYS2P54840 703 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 TUSC1Q2TAM9 212 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 PPP2R2DQ66LE6 453 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 TRAF7Q6Q0C0 670 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 ANKRD18AQ8IVF6 992 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 NME8Q8N427 588 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 GPT2Q8TD30 523 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 DNAAF4Q8WXU2 420 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 ZNF428Q96B54 188 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 ERO1AQ96HE7 468 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 SLX1AQ9BQ83 275 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 MTA3Q9BTC8 594 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 THUMPD2Q9BTF0 503 aaKnown RBP7.61□□□□□ -1.19
KARS-211ENST00000569298 HOMER3Q9NSC5 361 aa7.61□□□□□ -1.19
KARS-211ENST00000569298 GNL3LQ9NVN8 582 aaKnown RBP7.61□□□□□ -1.19
KARS-211ENST00000569298 VIRMAQ69YN4 1812 aaKnown RBP7.6□□□□□ -1.19
KARS-211ENST00000569298 MOXD2PA6NHM9 499 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 GDF9O60383 454 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 MBD3O95983 291 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 NBPF7P0C2Y1 421 aaPredicted RBP7.6□□□□□ -1.19
KARS-211ENST00000569298 MYBL2P10244 700 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 ACTN2P35609 894 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 PSMC1P62191 440 aaKnown RBP7.6□□□□□ -1.19
KARS-211ENST00000569298 RBM6P78332 1123 aaKnown RBP7.6□□□□□ -1.19
KARS-211ENST00000569298 GJC2Q5T442 439 aaPredicted RBP7.6□□□□□ -1.19
KARS-211ENST00000569298 TRIM74Q86UV6 250 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 TRIM73Q86UV7 250 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 NCAPG2Q86XI2 1143 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 GIMAP7Q8NHV1 300 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 POM121Q96HA1 1249 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 RMDN2Q96LZ7 410 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 ZNF396Q96N95 335 aaPredicted RBP7.6□□□□□ -1.19
KARS-211ENST00000569298 TRIM6Q9C030 488 aaPredicted RBP7.6□□□□□ -1.19
KARS-211ENST00000569298 ZSCAN16Q9H4T2 348 aaPredicted RBP7.6□□□□□ -1.19
KARS-211ENST00000569298 AKAP2Q9Y2D5 859 aa7.6□□□□□ -1.19
KARS-211ENST00000569298 PTPRCP08575 1304 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 NUTM2BA6NNL0 878 aaPredicted RBP7.59□□□□□ -1.19
KARS-211ENST00000569298 NUTM2EB1AL46 878 aaPredicted RBP7.59□□□□□ -1.19
KARS-211ENST00000569298 CAND2O75155 1236 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 DXOO77932 396 aaKnown RBP7.59□□□□□ -1.19
KARS-211ENST00000569298 SASH1O94885 1247 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 SNUPNO95149 360 aaKnown RBP7.59□□□□□ -1.19
KARS-211ENST00000569298 FAM163BP0C2L3 166 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 NDUFV2P19404 249 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 SSFA2P28290 1259 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 GJA5P36382 358 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 EIF5P55010 431 aaKnown RBP7.59□□□□□ -1.19
KARS-211ENST00000569298 SART3Q15020 963 aaKnown RBP7.59□□□□□ -1.19
KARS-211ENST00000569298 HSP90AB2PQ58FF8 381 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 NUTM2DQ5VT03 806 aaPredicted RBP7.59□□□□□ -1.19
KARS-211ENST00000569298 ZNF280DQ6N043 979 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 NUTM2AQ8IVF1 878 aaPredicted RBP7.59□□□□□ -1.19
KARS-211ENST00000569298 CCDC112Q8NEF3 446 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 HDAC7Q8WUI4 952 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 TSC1Q92574 1164 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 DDX11Q96FC9 970 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 TMX1Q9H3N1 280 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 SNRKQ9NRH2 765 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 IRAK4Q9NWZ3 460 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 UTP6Q9NYH9 597 aaKnown RBP7.59□□□□□ -1.19
KARS-211ENST00000569298 FRMD4BQ9Y2L6 1034 aa7.59□□□□□ -1.19
KARS-211ENST00000569298 LRRFIP2Q9Y608 721 aaKnown RBP7.59□□□□□ -1.19
KARS-211ENST00000569298 MTUS2Q5JR59 1369 aa7.59□□□□□ -1.2
KARS-211ENST00000569298 ELP1O95163 1332 aa7.58□□□□□ -1.2
KARS-211ENST00000569298 EIF3CLB5ME19 914 aaKnown RBP7.58□□□□□ -1.2
KARS-211ENST00000569298 CD2BP2O95400 341 aaKnown RBP7.58□□□□□ -1.2
KARS-211ENST00000569298 H2AFXP16104 143 aaPredicted RBP7.58□□□□□ -1.2
KARS-211ENST00000569298 PECAM1P16284 738 aaPredicted RBP7.58□□□□□ -1.2
KARS-211ENST00000569298 ALDH1B1P30837 517 aa7.58□□□□□ -1.2
KARS-211ENST00000569298 ELF1P32519 619 aa7.58□□□□□ -1.2
KARS-211ENST00000569298 GUCA2AQ02747 115 aa7.58□□□□□ -1.2
KARS-211ENST00000569298 SFSWAPQ12872 951 aaKnown RBP7.58□□□□□ -1.2
KARS-211ENST00000569298 TAF7Q15545 349 aaPredicted RBP7.58□□□□□ -1.2
KARS-211ENST00000569298 ZNF483Q8TF39 744 aaPredicted RBP7.58□□□□□ -1.2
KARS-211ENST00000569298 EIF3CQ99613 913 aaKnown RBP7.58□□□□□ -1.2
KARS-211ENST00000569298 KIF2CQ99661 725 aa7.58□□□□□ -1.2
KARS-211ENST00000569298 CRACR2AQ9BSW2 395 aa7.58□□□□□ -1.2
KARS-211ENST00000569298 POLR3CQ9BUI4 534 aaPredicted RBP7.58□□□□□ -1.2
KARS-211ENST00000569298 CLIP2Q9UDT6 1046 aa7.58□□□□□ -1.2
KARS-211ENST00000569298 SCAF11Q99590 1463 aaKnown RBP7.57□□□□□ -1.2
KARS-211ENST00000569298 H7C1W4 665 aa7.57□□□□□ -1.2
KARS-211ENST00000569298 RTN2O75298 545 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms