RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 GOLGB1Q14789 3259 aaKnown RBP16.2■□□□□ 0.18
CDT1-203ENST00000569140 H7C1W4 665 aa16.19■□□□□ 0.18
CDT1-203ENST00000569140 SF3B3Q15393 1217 aaKnown RBP16.19■□□□□ 0.18
CDT1-203ENST00000569140 C9orf131Q5VYM1 1079 aa16.19■□□□□ 0.18
CDT1-203ENST00000569140 CHMP3Q9Y3E7 222 aa16.19■□□□□ 0.18
CDT1-203ENST00000569140 NFKBIEO00221 500 aa16.18■□□□□ 0.18
CDT1-203ENST00000569140 GRM8O00222 908 aa16.18■□□□□ 0.18
CDT1-203ENST00000569140 IPO8O15397 1037 aaKnown RBP16.18■□□□□ 0.18
CDT1-203ENST00000569140 SLC51AQ86UW1 340 aa16.18■□□□□ 0.18
CDT1-203ENST00000569140 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
CDT1-203ENST00000569140 TAF1P21675 1872 aa16.18■□□□□ 0.18
CDT1-203ENST00000569140 MYH3P11055 1940 aa16.17■□□□□ 0.18
CDT1-203ENST00000569140 RTKN2Q8IZC4 609 aa16.17■□□□□ 0.18
CDT1-203ENST00000569140 ZNF526Q8TF50 670 aaPredicted RBP16.17■□□□□ 0.18
CDT1-203ENST00000569140 C7orf43Q8WVR3 580 aa16.17■□□□□ 0.18
CDT1-203ENST00000569140 CELF1Q92879 486 aaKnown RBP16.17■□□□□ 0.18
CDT1-203ENST00000569140 BBOX1O75936 387 aa16.16■□□□□ 0.18
CDT1-203ENST00000569140 LMNB1P20700 586 aa16.16■□□□□ 0.18
CDT1-203ENST00000569140 CCT4P50991 539 aaKnown RBP16.16■□□□□ 0.18
CDT1-203ENST00000569140 CLUAP1Q96AJ1 413 aa16.16■□□□□ 0.18
CDT1-203ENST00000569140 ATP6V0A2Q9Y487 856 aa16.16■□□□□ 0.18
CDT1-203ENST00000569140 FER1L6Q2WGJ9 1857 aa16.16■□□□□ 0.18
CDT1-203ENST00000569140 BRPF1P55201 1214 aaPredicted RBP16.15■□□□□ 0.18
CDT1-203ENST00000569140 CASP7P55210 303 aa16.15■□□□□ 0.18
CDT1-203ENST00000569140 FKBP4Q02790 459 aaKnown RBP eCLIP16.15■□□□□ 0.18
CDT1-203ENST00000569140 FAM161AQ3B820 660 aa16.15■□□□□ 0.18
CDT1-203ENST00000569140 ZKSCAN2Q63HK3 967 aa16.15■□□□□ 0.18
CDT1-203ENST00000569140 CC2D2BQ6DHV5 1058 aa16.15■□□□□ 0.18
CDT1-203ENST00000569140 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
CDT1-203ENST00000569140 TTLL11Q8NHH1 800 aa16.15■□□□□ 0.18
CDT1-203ENST00000569140 CDC5LQ99459 802 aaKnown RBP16.15■□□□□ 0.18
CDT1-203ENST00000569140 GREM2Q9H772 168 aa16.15■□□□□ 0.18
CDT1-203ENST00000569140 ZNF277Q9NRM2 450 aaPredicted RBP16.15■□□□□ 0.18
CDT1-203ENST00000569140 SPEF2Q9C093 1822 aa16.15■□□□□ 0.18
CDT1-203ENST00000569140 RPS8P62241 208 aaKnown RBP16.14■□□□□ 0.17
CDT1-203ENST00000569140 DPP8Q6V1X1 898 aaPredicted RBP16.14■□□□□ 0.17
CDT1-203ENST00000569140 TMC4Q7Z404 712 aa16.14■□□□□ 0.17
CDT1-203ENST00000569140 TIAM2Q8IVF5 1701 aa16.14■□□□□ 0.17
CDT1-203ENST00000569140 NBPF7P0C2Y1 421 aaPredicted RBP16.13■□□□□ 0.17
CDT1-203ENST00000569140 TRIM27P14373 513 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 ITGA6P23229 1130 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 TAF7LQ5H9L4 462 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 ATF7IPQ6VMQ6 1270 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 SP8Q8IXZ3 490 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 FTSJ3Q8IY81 847 aaKnown RBP16.13■□□□□ 0.17
CDT1-203ENST00000569140 ARHGAP45Q92619 1136 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 SUCLG2Q96I99 432 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 PLA2G12BQ9BX93 195 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 TNNQ9UQP3 1299 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 COL4A1P02462 1669 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 SBF1O95248 1867 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 CCDC88AQ3V6T2 1871 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 LTBP3Q9NS15 1303 aa16.13■□□□□ 0.17
CDT1-203ENST00000569140 UTRNP46939 3433 aa16.12■□□□□ 0.17
CDT1-203ENST00000569140 IGHMBP2P38935 993 aaKnown RBP16.12■□□□□ 0.17
CDT1-203ENST00000569140 PRELPP51888 382 aa16.12■□□□□ 0.17
CDT1-203ENST00000569140 GRIPAP1Q4V328 841 aa16.12■□□□□ 0.17
CDT1-203ENST00000569140 LMBR1LQ6UX01 489 aa16.12■□□□□ 0.17
CDT1-203ENST00000569140 MPNDQ8N594 471 aa16.12■□□□□ 0.17
CDT1-203ENST00000569140 ANKRD18BA2A2Z9 1011 aa16.11■□□□□ 0.17
CDT1-203ENST00000569140 UBTFL1P0CB47 393 aaPredicted RBP16.11■□□□□ 0.17
CDT1-203ENST00000569140 FOXO4P98177 505 aa16.11■□□□□ 0.17
CDT1-203ENST00000569140 IFIT5Q13325 482 aaKnown RBP16.11■□□□□ 0.17
CDT1-203ENST00000569140 EPHA10Q5JZY3 1008 aa16.11■□□□□ 0.17
CDT1-203ENST00000569140 ZNF784Q8NCA9 323 aaPredicted RBP16.11■□□□□ 0.17
CDT1-203ENST00000569140 SUPT20HQ8NEM7 779 aa16.11■□□□□ 0.17
CDT1-203ENST00000569140 MPHOSPH8Q99549 860 aa16.11■□□□□ 0.17
CDT1-203ENST00000569140 ANKIB1Q9P2G1 1089 aa16.11■□□□□ 0.17
CDT1-203ENST00000569140 RCAN3Q9UKA8 241 aa16.11■□□□□ 0.17
CDT1-203ENST00000569140 NSFL1CQ9UNZ2 370 aaKnown RBP16.11■□□□□ 0.17
CDT1-203ENST00000569140 IARSP41252 1262 aaKnown RBP16.1■□□□□ 0.17
CDT1-203ENST00000569140 CCDC57Q2TAC2 916 aa16.1■□□□□ 0.17
CDT1-203ENST00000569140 PSMD1Q99460 953 aa16.1■□□□□ 0.17
CDT1-203ENST00000569140 BICC1Q9H694 974 aaKnown RBP16.1■□□□□ 0.17
CDT1-203ENST00000569140 LRRC37AA6NMS7 1700 aa16.1■□□□□ 0.17
CDT1-203ENST00000569140 RTL9Q8NET4 1388 aa16.1■□□□□ 0.17
CDT1-203ENST00000569140 C6orf229H3BNL8 230 aa16.09■□□□□ 0.17
CDT1-203ENST00000569140 PPIP5K2O43314 1243 aa16.09■□□□□ 0.17
CDT1-203ENST00000569140 CSF1RP07333 972 aa16.09■□□□□ 0.17
CDT1-203ENST00000569140 GPSM2P81274 684 aa16.09■□□□□ 0.17
CDT1-203ENST00000569140 LARGE2Q8N3Y3 721 aa16.09■□□□□ 0.17
CDT1-203ENST00000569140 USP44Q9H0E7 712 aa16.09■□□□□ 0.17
CDT1-203ENST00000569140 GPBP1L1Q9HC44 474 aaPredicted RBP16.09■□□□□ 0.17
CDT1-203ENST00000569140 UTYO14607 1347 aa16.09■□□□□ 0.17
CDT1-203ENST00000569140 UFL1O94874 794 aa16.08■□□□□ 0.16
CDT1-203ENST00000569140 AOC3Q16853 763 aa16.08■□□□□ 0.16
CDT1-203ENST00000569140 INTS3Q68E01 1043 aaKnown RBP16.08■□□□□ 0.16
CDT1-203ENST00000569140 ITPRIPQ8IWB1 547 aa16.08■□□□□ 0.16
CDT1-203ENST00000569140 DZIP1LQ8IYY4 767 aaKnown RBP16.08■□□□□ 0.16
CDT1-203ENST00000569140 JDP2Q8WYK2 163 aa16.08■□□□□ 0.16
CDT1-203ENST00000569140 SNED1Q8TER0 1413 aa16.08■□□□□ 0.16
CDT1-203ENST00000569140 NIM1KQ8IY84 436 aa16.07■□□□□ 0.16
CDT1-203ENST00000569140 TMEM57Q8N5G2 664 aa16.07■□□□□ 0.16
CDT1-203ENST00000569140 MEIS3Q99687 375 aa16.07■□□□□ 0.16
CDT1-203ENST00000569140 DICER1Q9UPY3 1922 aaKnown RBP16.06■□□□□ 0.16
CDT1-203ENST00000569140 KDM2BQ8NHM5 1336 aa16.06■□□□□ 0.16
CDT1-203ENST00000569140 ZC3H4Q9UPT8 1303 aaKnown RBP16.06■□□□□ 0.16
CDT1-203ENST00000569140 G3V3G9 751 aa16.06■□□□□ 0.16
CDT1-203ENST00000569140 RIMBP2O15034 1052 aa16.06■□□□□ 0.16
CDT1-203ENST00000569140 DCAF8Q5TAQ9 597 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms