RNA–Protein interactions for RNA: ENST00000567339.1

GGA2-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 3

Gene GGA2, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-210ENST00000567339 PRPF40BQ6NWY9 871 aaKnown RBP12.42□□□□□ -0.42
GGA2-210ENST00000567339 TMX4Q9H1E5 349 aaPredicted RBP12.42□□□□□ -0.42
GGA2-210ENST00000567339 DDX60Q8IY21 1712 aaKnown RBP12.42□□□□□ -0.42
GGA2-210ENST00000567339 GNAI3P08754 354 aa12.41□□□□□ -0.42
GGA2-210ENST00000567339 UBTFL1P0CB47 393 aaPredicted RBP12.41□□□□□ -0.42
GGA2-210ENST00000567339 GRAPQ13588 217 aa12.41□□□□□ -0.42
GGA2-210ENST00000567339 PDE3AQ14432 1141 aa12.41□□□□□ -0.42
GGA2-210ENST00000567339 C3orf67Q6ZVT6 689 aa12.41□□□□□ -0.42
GGA2-210ENST00000567339 PELP1Q8IZL8 1130 aaKnown RBP12.41□□□□□ -0.42
GGA2-210ENST00000567339 GRAPLQ8TC17 118 aaPredicted RBP12.41□□□□□ -0.42
GGA2-210ENST00000567339 CDC5LQ99459 802 aaKnown RBP12.41□□□□□ -0.42
GGA2-210ENST00000567339 USP44Q9H0E7 712 aa12.41□□□□□ -0.42
GGA2-210ENST00000567339 CHMP4BQ9H444 224 aaKnown RBP12.41□□□□□ -0.42
GGA2-210ENST00000567339 ARFGEF1Q9Y6D6 1849 aa12.4□□□□□ -0.42
GGA2-210ENST00000567339 CSF1RP07333 972 aa12.4□□□□□ -0.42
GGA2-210ENST00000567339 NBPF7P0C2Y1 421 aaPredicted RBP12.4□□□□□ -0.42
GGA2-210ENST00000567339 YBX3P16989 372 aaKnown RBP eCLIP12.4□□□□□ -0.424e-6■□□□□ 11.2
GGA2-210ENST00000567339 TTLL11Q8NHH1 800 aa12.4□□□□□ -0.42
GGA2-210ENST00000567339 PPEF1O14829 653 aaPredicted RBP12.39□□□□□ -0.43
GGA2-210ENST00000567339 RABL6Q3YEC7 729 aaPredicted RBP12.39□□□□□ -0.43
GGA2-210ENST00000567339 CCDC93Q567U6 631 aa12.39□□□□□ -0.43
GGA2-210ENST00000567339 RTKN2Q8IZC4 609 aa12.39□□□□□ -0.43
GGA2-210ENST00000567339 TMEM57Q8N5G2 664 aa12.39□□□□□ -0.43
GGA2-210ENST00000567339 C7orf43Q8WVR3 580 aa12.39□□□□□ -0.43
GGA2-210ENST00000567339 CLUAP1Q96AJ1 413 aa12.39□□□□□ -0.43
GGA2-210ENST00000567339 LTBP3Q9NS15 1303 aa12.38□□□□□ -0.43
GGA2-210ENST00000567339 GOLGB1Q14789 3259 aaKnown RBP12.38□□□□□ -0.43
GGA2-210ENST00000567339 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
GGA2-210ENST00000567339 FOXO4P98177 505 aa12.38□□□□□ -0.43
GGA2-210ENST00000567339 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
GGA2-210ENST00000567339 ITPRIPQ8IWB1 547 aa12.38□□□□□ -0.43
GGA2-210ENST00000567339 JARID2Q92833 1246 aaPredicted RBP12.38□□□□□ -0.43
GGA2-210ENST00000567339 ATP6V0A2Q9Y487 856 aa12.38□□□□□ -0.43
GGA2-210ENST00000567339 MYH3P11055 1940 aa12.38□□□□□ -0.43
GGA2-210ENST00000567339 ANKRD18BA2A2Z9 1011 aa12.37□□□□□ -0.43
GGA2-210ENST00000567339 ITGA6P23229 1130 aa12.37□□□□□ -0.43
GGA2-210ENST00000567339 IGHMBP2P38935 993 aaKnown RBP12.37□□□□□ -0.43
GGA2-210ENST00000567339 CCDC57Q2TAC2 916 aa12.37□□□□□ -0.43
GGA2-210ENST00000567339 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
GGA2-210ENST00000567339 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
GGA2-210ENST00000567339 SP8Q8IXZ3 490 aa12.37□□□□□ -0.43
GGA2-210ENST00000567339 SUCLG2Q96I99 432 aa12.37□□□□□ -0.43
GGA2-210ENST00000567339 GREM2Q9H772 168 aa12.37□□□□□ -0.43
GGA2-210ENST00000567339 DDX19BQ9UMR2 479 aa12.37□□□□□ -0.43
GGA2-210ENST00000567339 C21orf2O43822 256 aa12.36□□□□□ -0.43
GGA2-210ENST00000567339 GNAI2P04899 355 aa12.36□□□□□ -0.43
GGA2-210ENST00000567339 RLBP1P12271 317 aa12.36□□□□□ -0.43
GGA2-210ENST00000567339 RRP1P56182 461 aaKnown RBP12.36□□□□□ -0.43
GGA2-210ENST00000567339 MVPQ14764 893 aaKnown RBP12.36□□□□□ -0.43
GGA2-210ENST00000567339 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
GGA2-210ENST00000567339 MEIS3Q99687 375 aa12.36□□□□□ -0.43
GGA2-210ENST00000567339 BICC1Q9H694 974 aaKnown RBP12.36□□□□□ -0.43
GGA2-210ENST00000567339 BSDC1Q9NW68 430 aaPredicted RBP12.36□□□□□ -0.43
GGA2-210ENST00000567339 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
GGA2-210ENST00000567339 UTRNP46939 3433 aa12.36□□□□□ -0.43
GGA2-210ENST00000567339 SLX4Q8IY92 1834 aa12.36□□□□□ -0.43
GGA2-210ENST00000567339 EPHA10Q5JZY3 1008 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 ARHGAP27Q6ZUM4 889 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 SUPT20HQ8NEM7 779 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 PANK1Q8TE04 598 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 CELF1Q92879 486 aaKnown RBP12.35□□□□□ -0.43
GGA2-210ENST00000567339 KAZALD1Q96I82 304 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 PSMD1Q99460 953 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 MPHOSPH8Q99549 860 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 VPS33BQ9H267 617 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 SEC31BQ9NQW1 1179 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 TNNQ9UQP3 1299 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 CHMP3Q9Y3E7 222 aa12.35□□□□□ -0.43
GGA2-210ENST00000567339 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
GGA2-210ENST00000567339 MTX1Q13505 466 aa12.34□□□□□ -0.43
GGA2-210ENST00000567339 TAF7LQ5H9L4 462 aa12.34□□□□□ -0.43
GGA2-210ENST00000567339 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
GGA2-210ENST00000567339 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
GGA2-210ENST00000567339 LRRFIP2Q9Y608 721 aaKnown RBP12.34□□□□□ -0.43
GGA2-210ENST00000567339 SNED1Q8TER0 1413 aa12.34□□□□□ -0.43
GGA2-210ENST00000567339 ZC3H4Q9UPT8 1303 aaKnown RBP12.34□□□□□ -0.43
GGA2-210ENST00000567339 NFKBIEO00221 500 aa12.33□□□□□ -0.44
GGA2-210ENST00000567339 ZBTB7BO15156 539 aaPredicted RBP12.33□□□□□ -0.44
GGA2-210ENST00000567339 PLIN1O60240 522 aa12.33□□□□□ -0.44
GGA2-210ENST00000567339 PODXL2Q9NZ53 605 aa12.33□□□□□ -0.44
GGA2-210ENST00000567339 FBXO3Q9UK99 471 aa12.33□□□□□ -0.44
GGA2-210ENST00000567339 LRRC37AA6NMS7 1700 aa12.33□□□□□ -0.44
GGA2-210ENST00000567339 LMNB1P20700 586 aa12.32□□□□□ -0.44
GGA2-210ENST00000567339 DPP8Q6V1X1 898 aaPredicted RBP12.32□□□□□ -0.44
GGA2-210ENST00000567339 MPNDQ8N594 471 aa12.32□□□□□ -0.44
GGA2-210ENST00000567339 RTFDC1Q9BY42 306 aaPredicted RBP12.32□□□□□ -0.44
GGA2-210ENST00000567339 ANKRD2Q9GZV1 360 aa12.32□□□□□ -0.44
GGA2-210ENST00000567339 ZNF219Q9P2Y4 722 aaPredicted RBP12.32□□□□□ -0.44
GGA2-210ENST00000567339 COG6Q9Y2V7 657 aa12.32□□□□□ -0.44
GGA2-210ENST00000567339 XDHP47989 1333 aa12.32□□□□□ -0.44
GGA2-210ENST00000567339 FER1L6Q2WGJ9 1857 aa12.31□□□□□ -0.44
GGA2-210ENST00000567339 AAMPQ13685 434 aa12.31□□□□□ -0.44
GGA2-210ENST00000567339 LDHAL6AQ6ZMR3 332 aa12.31□□□□□ -0.44
GGA2-210ENST00000567339 EYA3Q99504 573 aa12.31□□□□□ -0.44
GGA2-210ENST00000567339 ANKIB1Q9P2G1 1089 aa12.31□□□□□ -0.44
GGA2-210ENST00000567339 CACNA1SQ13698 1873 aa12.31□□□□□ -0.44
GGA2-210ENST00000567339 CNNM1Q9NRU3 951 aa12.3□□□□□ -0.44
GGA2-210ENST00000567339 ZBTB40Q9NUA8 1239 aa12.3□□□□□ -0.44
GGA2-210ENST00000567339 GGA1Q9UJY5 639 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms