RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TRMT112Q9UI30 125 aaKnown RBP14.5□□□□□ -0.09
KARS-207ENST00000566560 RIC1Q4ADV7 1423 aa14.49□□□□□ -0.09
KARS-207ENST00000566560 SH3TC1Q8TE82 1336 aa14.49□□□□□ -0.09
KARS-207ENST00000566560 MS4A1P11836 297 aa14.49□□□□□ -0.09
KARS-207ENST00000566560 GCKRQ14397 625 aa14.49□□□□□ -0.09
KARS-207ENST00000566560 TPTE2Q6XPS3 522 aa14.49□□□□□ -0.09
KARS-207ENST00000566560 DLEC1Q9Y238 1755 aa14.49□□□□□ -0.09
KARS-207ENST00000566560 KIAA1551Q9HCM1 1747 aa14.49□□□□□ -0.09
KARS-207ENST00000566560 PCCAP05165 728 aaPredicted RBP14.48□□□□□ -0.09
KARS-207ENST00000566560 RLBP1P12271 317 aa14.48□□□□□ -0.09
KARS-207ENST00000566560 ERFEQ4G0M1 354 aa14.48□□□□□ -0.09
KARS-207ENST00000566560 RTL5Q5HYW3 569 aaPredicted RBP14.48□□□□□ -0.09
KARS-207ENST00000566560 UBE3BQ7Z3V4 1068 aa14.48□□□□□ -0.09
KARS-207ENST00000566560 ITPRIPQ8IWB1 547 aa14.48□□□□□ -0.09
KARS-207ENST00000566560 CCDC24Q8N4L8 307 aa14.48□□□□□ -0.09
KARS-207ENST00000566560 TMEM57Q8N5G2 664 aa14.48□□□□□ -0.09
KARS-207ENST00000566560 ZBTB38Q8NAP3 1195 aaPredicted RBP14.48□□□□□ -0.09
KARS-207ENST00000566560 PANK1Q8TE04 598 aa14.48□□□□□ -0.09
KARS-207ENST00000566560 PPP1R1BQ9UD71 204 aaPredicted RBP14.48□□□□□ -0.09
KARS-207ENST00000566560 GRM8O00222 908 aa14.47□□□□□ -0.09
KARS-207ENST00000566560 MAP3K13O43283 966 aa14.47□□□□□ -0.09
KARS-207ENST00000566560 INTS3Q68E01 1043 aaKnown RBP14.47□□□□□ -0.09
KARS-207ENST00000566560 FAM89AQ96GI7 184 aa14.47□□□□□ -0.09
KARS-207ENST00000566560 PHF12Q96QT6 1004 aa14.47□□□□□ -0.09
KARS-207ENST00000566560 C9orf78Q9NZ63 289 aaPredicted RBP14.47□□□□□ -0.09
KARS-207ENST00000566560 PCDHB13Q9Y5F0 798 aa14.47□□□□□ -0.09
KARS-207ENST00000566560 CDHR2Q9BYE9 1310 aa14.46□□□□□ -0.09
KARS-207ENST00000566560 JARID2Q92833 1246 aaPredicted RBP14.46□□□□□ -0.09
KARS-207ENST00000566560 CACNA1SQ13698 1873 aa14.46□□□□□ -0.1
KARS-207ENST00000566560 IRS4O14654 1257 aaPredicted RBP14.45□□□□□ -0.1
KARS-207ENST00000566560 PDE3AQ14432 1141 aa14.45□□□□□ -0.1
KARS-207ENST00000566560 C20orf194Q5TEA3 1177 aa14.45□□□□□ -0.1
KARS-207ENST00000566560 SYNE4Q8N205 404 aa14.45□□□□□ -0.1
KARS-207ENST00000566560 SUPT16HQ9Y5B9 1047 aaKnown RBP14.45□□□□□ -0.1
KARS-207ENST00000566560 BRCA1P38398 1863 aaKnown RBP14.44□□□□□ -0.1
KARS-207ENST00000566560 H7C1W4 665 aa14.44□□□□□ -0.1
KARS-207ENST00000566560 HCLS1P14317 486 aaPredicted RBP14.44□□□□□ -0.1
KARS-207ENST00000566560 MVPQ14764 893 aaKnown RBP14.44□□□□□ -0.1
KARS-207ENST00000566560 UTYO14607 1347 aa14.43□□□□□ -0.1
KARS-207ENST00000566560 NBPF7P0C2Y1 421 aaPredicted RBP14.43□□□□□ -0.1
KARS-207ENST00000566560 UBTFL1P0CB47 393 aaPredicted RBP14.43□□□□□ -0.1
KARS-207ENST00000566560 HSP90B1P14625 803 aaKnown RBP14.43□□□□□ -0.1
KARS-207ENST00000566560 PDE6BP35913 854 aa14.43□□□□□ -0.1
KARS-207ENST00000566560 CASP7P55210 303 aa14.43□□□□□ -0.1
KARS-207ENST00000566560 MEIS3Q99687 375 aa14.43□□□□□ -0.1
KARS-207ENST00000566560 BRIP1Q9BX63 1249 aa14.43□□□□□ -0.1
KARS-207ENST00000566560 PCDHB8Q9UN66 801 aa14.43□□□□□ -0.1
KARS-207ENST00000566560 COG6Q9Y2V7 657 aa14.43□□□□□ -0.1
KARS-207ENST00000566560 CD2APQ9Y5K6 639 aa14.43□□□□□ -0.1
KARS-207ENST00000566560 EVX2Q03828 476 aa14.42□□□□□ -0.1
KARS-207ENST00000566560 SLC10A5Q5PT55 438 aa14.42□□□□□ -0.1
KARS-207ENST00000566560 FHDC1Q9C0D6 1143 aaPredicted RBP14.42□□□□□ -0.1
KARS-207ENST00000566560 USP44Q9H0E7 712 aa14.42□□□□□ -0.1
KARS-207ENST00000566560 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
KARS-207ENST00000566560 SPEF2Q9C093 1822 aa14.42□□□□□ -0.1
KARS-207ENST00000566560 PDE8AO60658 829 aa14.41□□□□□ -0.1
KARS-207ENST00000566560 GNAI3P08754 354 aa14.41□□□□□ -0.1
KARS-207ENST00000566560 CTSWP56202 376 aa14.41□□□□□ -0.1
KARS-207ENST00000566560 C3orf67Q6ZVT6 689 aa14.41□□□□□ -0.1
KARS-207ENST00000566560 IFNL1Q8IU54 200 aa14.41□□□□□ -0.1
KARS-207ENST00000566560 SUCLG2Q96I99 432 aa14.41□□□□□ -0.1
KARS-207ENST00000566560 NLRP3Q96P20 1036 aa14.41□□□□□ -0.1
KARS-207ENST00000566560 PLA2G12BQ9BX93 195 aa14.41□□□□□ -0.1
KARS-207ENST00000566560 CHRNA5P30532 468 aa14.4□□□□□ -0.1
KARS-207ENST00000566560 C2CD5Q86YS7 1000 aa14.4□□□□□ -0.1
KARS-207ENST00000566560 HS6ST3Q8IZP7 471 aa14.4□□□□□ -0.1
KARS-207ENST00000566560 H0YIN7 160 aa14.39□□□□□ -0.11
KARS-207ENST00000566560 TGFB2P61812 414 aa14.39□□□□□ -0.11
KARS-207ENST00000566560 CRY2Q49AN0 593 aa14.39□□□□□ -0.11
KARS-207ENST00000566560 NLGN2Q8NFZ4 835 aa14.39□□□□□ -0.11
KARS-207ENST00000566560 RPGRQ92834 1020 aaKnown RBP14.39□□□□□ -0.11
KARS-207ENST00000566560 PDZRN3Q9UPQ7 1066 aa14.39□□□□□ -0.11
KARS-207ENST00000566560 HDAC5Q9UQL6 1122 aa14.39□□□□□ -0.11
KARS-207ENST00000566560 LRRFIP2Q9Y608 721 aaKnown RBP14.39□□□□□ -0.11
KARS-207ENST00000566560 TAF1P21675 1872 aa14.39□□□□□ -0.11
KARS-207ENST00000566560 KLRG2A4D1S0 409 aaPredicted RBP14.38□□□□□ -0.11
KARS-207ENST00000566560 DPEP1P16444 411 aa14.38□□□□□ -0.11
KARS-207ENST00000566560 CCDC152Q4G0S7 254 aa14.38□□□□□ -0.11
KARS-207ENST00000566560 EPHA10Q5JZY3 1008 aa14.38□□□□□ -0.11
KARS-207ENST00000566560 CCDC85AQ96PX6 553 aaPredicted RBP14.38□□□□□ -0.11
KARS-207ENST00000566560 CRBNQ96SW2 442 aa14.38□□□□□ -0.11
KARS-207ENST00000566560 CHMP4BQ9H444 224 aaKnown RBP14.38□□□□□ -0.11
KARS-207ENST00000566560 BICC1Q9H694 974 aaKnown RBP14.38□□□□□ -0.11
KARS-207ENST00000566560 CHMP3Q9Y3E7 222 aa14.38□□□□□ -0.11
KARS-207ENST00000566560 COL4A1P02462 1669 aa14.38□□□□□ -0.11
KARS-207ENST00000566560 RTL9Q8NET4 1388 aa14.37□□□□□ -0.11
KARS-207ENST00000566560 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.37□□□□□ -0.11
KARS-207ENST00000566560 ZBTB7BO15156 539 aaPredicted RBP14.37□□□□□ -0.11
KARS-207ENST00000566560 GNAI2P04899 355 aa14.37□□□□□ -0.11
KARS-207ENST00000566560 SRGNP10124 158 aa14.37□□□□□ -0.11
KARS-207ENST00000566560 NPR1P16066 1061 aa14.37□□□□□ -0.11
KARS-207ENST00000566560 CLCN6P51797 869 aa14.37□□□□□ -0.11
KARS-207ENST00000566560 FOXO4P98177 505 aa14.37□□□□□ -0.11
KARS-207ENST00000566560 PDAP1Q13442 181 aaKnown RBP14.37□□□□□ -0.11
KARS-207ENST00000566560 SF3B3Q15393 1217 aaKnown RBP14.37□□□□□ -0.11
KARS-207ENST00000566560 FAM161AQ3B820 660 aa14.37□□□□□ -0.11
KARS-207ENST00000566560 MASTLQ96GX5 879 aa14.37□□□□□ -0.11
KARS-207ENST00000566560 KAZALD1Q96I82 304 aa14.37□□□□□ -0.11
KARS-207ENST00000566560 ZFP91Q96JP5 570 aaPredicted RBP14.37□□□□□ -0.11
KARS-207ENST00000566560 SYT17Q9BSW7 474 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms