RNA–Protein interactions for RNA: ENST00000566515.5

CCNDBP1-208, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 5

Gene CCNDBP1, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-208ENST00000566515 ABCC4O15439 1325 aa26.49■■□□□ 1.83
CCNDBP1-208ENST00000566515 ZKSCAN2Q63HK3 967 aa26.48■■□□□ 1.83
CCNDBP1-208ENST00000566515 CLUAP1Q96AJ1 413 aa26.48■■□□□ 1.83
CCNDBP1-208ENST00000566515 CCT4P50991 539 aaKnown RBP26.47■■□□□ 1.83
CCNDBP1-208ENST00000566515 CTSWP56202 376 aa26.47■■□□□ 1.83
CCNDBP1-208ENST00000566515 OLFM4Q6UX06 510 aa26.47■■□□□ 1.83
CCNDBP1-208ENST00000566515 C7orf43Q8WVR3 580 aa26.47■■□□□ 1.83
CCNDBP1-208ENST00000566515 NBPF7P0C2Y1 421 aaPredicted RBP26.46■■□□□ 1.83
CCNDBP1-208ENST00000566515 CCDC152Q4G0S7 254 aa26.45■■□□□ 1.82
CCNDBP1-208ENST00000566515 TTLL11Q8NHH1 800 aa26.45■■□□□ 1.82
CCNDBP1-208ENST00000566515 PLA2G12BQ9BX93 195 aa26.45■■□□□ 1.82
CCNDBP1-208ENST00000566515 USP44Q9H0E7 712 aa26.45■■□□□ 1.82
CCNDBP1-208ENST00000566515 CHD4Q14839 1912 aa26.45■■□□□ 1.82
CCNDBP1-208ENST00000566515 COL4A1P02462 1669 aa26.45■■□□□ 1.82
CCNDBP1-208ENST00000566515 SLC51AQ86UW1 340 aa26.44■■□□□ 1.82
CCNDBP1-208ENST00000566515 SEC31BQ9NQW1 1179 aa26.44■■□□□ 1.82
CCNDBP1-208ENST00000566515 PPEF1O14829 653 aaPredicted RBP26.43■■□□□ 1.82
CCNDBP1-208ENST00000566515 GRAPQ13588 217 aa26.43■■□□□ 1.82
CCNDBP1-208ENST00000566515 GRAPLQ8TC17 118 aaPredicted RBP26.43■■□□□ 1.82
CCNDBP1-208ENST00000566515 UTYO14607 1347 aa26.43■■□□□ 1.82
CCNDBP1-208ENST00000566515 INTS3Q68E01 1043 aaKnown RBP26.43■■□□□ 1.82
CCNDBP1-208ENST00000566515 CELF1Q92879 486 aaKnown RBP26.43■■□□□ 1.82
CCNDBP1-208ENST00000566515 FOXO4P98177 505 aa26.42■■□□□ 1.82
CCNDBP1-208ENST00000566515 EPHA10Q5JZY3 1008 aa26.42■■□□□ 1.82
CCNDBP1-208ENST00000566515 SUCLG2Q96I99 432 aa26.42■■□□□ 1.82
CCNDBP1-208ENST00000566515 GREM2Q9H772 168 aa26.42■■□□□ 1.82
CCNDBP1-208ENST00000566515 FER1L6Q2WGJ9 1857 aa26.42■■□□□ 1.82
CCNDBP1-208ENST00000566515 BBOX1O75936 387 aa26.41■■□□□ 1.82
CCNDBP1-208ENST00000566515 CSF1RP07333 972 aa26.39■■□□□ 1.82
CCNDBP1-208ENST00000566515 RASSF7Q02833 373 aa26.39■■□□□ 1.82
CCNDBP1-208ENST00000566515 CCDC93Q567U6 631 aa26.39■■□□□ 1.82
CCNDBP1-208ENST00000566515 SOGA3Q5TF21 947 aa26.39■■□□□ 1.82
CCNDBP1-208ENST00000566515 KAZALD1Q96I82 304 aa26.39■■□□□ 1.82
CCNDBP1-208ENST00000566515 NFKBIEO00221 500 aa26.39■■□□□ 1.81
CCNDBP1-208ENST00000566515 DZIP1LQ8IYY4 767 aaKnown RBP26.39■■□□□ 1.81
CCNDBP1-208ENST00000566515 TMEM57Q8N5G2 664 aa26.39■■□□□ 1.81
CCNDBP1-208ENST00000566515 ATP6V0A2Q9Y487 856 aa26.39■■□□□ 1.81
CCNDBP1-208ENST00000566515 PLIN1O60240 522 aa26.38■■□□□ 1.81
CCNDBP1-208ENST00000566515 RLBP1P12271 317 aa26.38■■□□□ 1.81
CCNDBP1-208ENST00000566515 RPS8P62241 208 aaKnown RBP26.38■■□□□ 1.81
CCNDBP1-208ENST00000566515 FAM161AQ3B820 660 aa26.38■■□□□ 1.81
CCNDBP1-208ENST00000566515 LMBR1LQ6UX01 489 aa26.38■■□□□ 1.81
CCNDBP1-208ENST00000566515 FTSJ3Q8IY81 847 aaKnown RBP26.38■■□□□ 1.81
CCNDBP1-208ENST00000566515 SBF1O95248 1867 aa26.38■■□□□ 1.81
CCNDBP1-208ENST00000566515 CCDC88AQ3V6T2 1871 aa26.38■■□□□ 1.81
CCNDBP1-208ENST00000566515 SPEF2Q9C093 1822 aa26.37■■□□□ 1.81
CCNDBP1-208ENST00000566515 CHMP3Q9Y3E7 222 aa26.37■■□□□ 1.81
CCNDBP1-208ENST00000566515 RTL9Q8NET4 1388 aa26.37■■□□□ 1.81
CCNDBP1-208ENST00000566515 MEIS3Q99687 375 aa26.36■■□□□ 1.81
CCNDBP1-208ENST00000566515 ITGA6P23229 1130 aa26.36■■□□□ 1.81
CCNDBP1-208ENST00000566515 SP8Q8IXZ3 490 aa26.36■■□□□ 1.81
CCNDBP1-208ENST00000566515 BICC1Q9H694 974 aaKnown RBP26.36■■□□□ 1.81
CCNDBP1-208ENST00000566515 UBTFL1P0CB47 393 aaPredicted RBP26.35■■□□□ 1.81
CCNDBP1-208ENST00000566515 CC2D2BQ6DHV5 1058 aa26.35■■□□□ 1.81
CCNDBP1-208ENST00000566515 ANKRD18AQ8IVF6 992 aa26.35■■□□□ 1.81
CCNDBP1-208ENST00000566515 RTKN2Q8IZC4 609 aa26.35■■□□□ 1.81
CCNDBP1-208ENST00000566515 PANK1Q8TE04 598 aa26.35■■□□□ 1.81
CCNDBP1-208ENST00000566515 TMX4Q9H1E5 349 aaPredicted RBP26.35■■□□□ 1.81
CCNDBP1-208ENST00000566515 PRELPP51888 382 aa26.34■■□□□ 1.81
CCNDBP1-208ENST00000566515 CDC5LQ99459 802 aaKnown RBP26.34■■□□□ 1.81
CCNDBP1-208ENST00000566515 TAOK3Q9H2K8 898 aa26.34■■□□□ 1.81
CCNDBP1-208ENST00000566515 SNED1Q8TER0 1413 aa26.33■■□□□ 1.81
CCNDBP1-208ENST00000566515 TMC4Q7Z404 712 aa26.33■■□□□ 1.81
CCNDBP1-208ENST00000566515 LRRC37AA6NMS7 1700 aa26.33■■□□□ 1.81
CCNDBP1-208ENST00000566515 ANKRD44Q8N8A2 993 aa26.32■■□□□ 1.8
CCNDBP1-208ENST00000566515 FKBP4Q02790 459 aaKnown RBP eCLIP26.32■■□□□ 1.8
CCNDBP1-208ENST00000566515 ITPRIPQ8IWB1 547 aa26.32■■□□□ 1.8
CCNDBP1-208ENST00000566515 ANKRD18BA2A2Z9 1011 aa26.31■■□□□ 1.8
CCNDBP1-208ENST00000566515 IFIT5Q13325 482 aaKnown RBP26.31■■□□□ 1.8
CCNDBP1-208ENST00000566515 C9orf131Q5VYM1 1079 aa26.31■■□□□ 1.8
CCNDBP1-208ENST00000566515 LTBP3Q9NS15 1303 aa26.3■■□□□ 1.8
CCNDBP1-208ENST00000566515 LMNB1P20700 586 aa26.3■■□□□ 1.8
CCNDBP1-208ENST00000566515 RABL6Q3YEC7 729 aaPredicted RBP26.3■■□□□ 1.8
CCNDBP1-208ENST00000566515 RNF181Q9P0P0 153 aa26.3■■□□□ 1.8
CCNDBP1-208ENST00000566515 LRRFIP2Q9Y608 721 aaKnown RBP26.3■■□□□ 1.8
CCNDBP1-208ENST00000566515 GNAI3P08754 354 aa26.29■■□□□ 1.8
CCNDBP1-208ENST00000566515 CCDC57Q2TAC2 916 aa26.29■■□□□ 1.8
CCNDBP1-208ENST00000566515 MPNDQ8N594 471 aa26.29■■□□□ 1.8
CCNDBP1-208ENST00000566515 ZNF277Q9NRM2 450 aaPredicted RBP26.29■■□□□ 1.8
CCNDBP1-208ENST00000566515 MS4A1P11836 297 aa26.28■■□□□ 1.8
CCNDBP1-208ENST00000566515 IGHMBP2P38935 993 aaKnown RBP26.28■■□□□ 1.8
CCNDBP1-208ENST00000566515 GRIPAP1Q4V328 841 aa26.28■■□□□ 1.8
CCNDBP1-208ENST00000566515 YY1P25490 414 aa26.28■■□□□ 1.8
CCNDBP1-208ENST00000566515 DPP8Q6V1X1 898 aaPredicted RBP26.28■■□□□ 1.8
CCNDBP1-208ENST00000566515 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.28■■□□□ 1.8
CCNDBP1-208ENST00000566515 ZNF594Q96JF6 807 aaPredicted RBP26.28■■□□□ 1.8
CCNDBP1-208ENST00000566515 PSMD1Q99460 953 aa26.28■■□□□ 1.8
CCNDBP1-208ENST00000566515 BSDC1Q9NW68 430 aaPredicted RBP26.28■■□□□ 1.8
CCNDBP1-208ENST00000566515 NSFL1CQ9UNZ2 370 aaKnown RBP26.28■■□□□ 1.8
CCNDBP1-208ENST00000566515 GPSM2P81274 684 aa26.27■■□□□ 1.8
CCNDBP1-208ENST00000566515 DICER1Q9UPY3 1922 aaKnown RBP26.26■■□□□ 1.8
CCNDBP1-208ENST00000566515 C20orf194Q5TEA3 1177 aa26.26■■□□□ 1.79
CCNDBP1-208ENST00000566515 MPHOSPH8Q99549 860 aa26.26■■□□□ 1.79
CCNDBP1-208ENST00000566515 HDAC5Q9UQL6 1122 aa26.26■■□□□ 1.79
CCNDBP1-208ENST00000566515 TAF7LQ5H9L4 462 aa26.25■■□□□ 1.79
CCNDBP1-208ENST00000566515 MINPP1Q9UNW1 487 aa26.25■■□□□ 1.79
CCNDBP1-208ENST00000566515 DUOX1Q9NRD9 1551 aa26.24■■□□□ 1.79
CCNDBP1-208ENST00000566515 ZBTB7BO15156 539 aaPredicted RBP26.24■■□□□ 1.79
CCNDBP1-208ENST00000566515 RTFDC1Q9BY42 306 aaPredicted RBP26.24■■□□□ 1.79
CCNDBP1-208ENST00000566515 ANKIB1Q9P2G1 1089 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms