RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 SLC51AQ86UW1 340 aa17.26■□□□□ 0.35
HACD3-208ENST00000566239 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
HACD3-208ENST00000566239 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
HACD3-208ENST00000566239 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
HACD3-208ENST00000566239 ITGBL1O95965 494 aaPredicted RBP17.25■□□□□ 0.35
HACD3-208ENST00000566239 ZEB1P37275 1124 aaPredicted RBP17.25■□□□□ 0.35
HACD3-208ENST00000566239 ZNF428Q96B54 188 aa17.25■□□□□ 0.35
HACD3-208ENST00000566239 ZNRF3Q9ULT6 936 aa17.25■□□□□ 0.35
HACD3-208ENST00000566239 TMEM88BA6NKF7 163 aa17.24■□□□□ 0.35
HACD3-208ENST00000566239 HSP90B1P14625 803 aaKnown RBP17.24■□□□□ 0.35
HACD3-208ENST00000566239 TRIM28Q13263 835 aaKnown RBP17.24■□□□□ 0.35
HACD3-208ENST00000566239 MAP1SQ66K74 1059 aaPredicted RBP17.24■□□□□ 0.35
HACD3-208ENST00000566239 CNTROBQ8N137 903 aa17.24■□□□□ 0.35
HACD3-208ENST00000566239 MKRN1Q9UHC7 482 aaKnown RBP17.24■□□□□ 0.35
HACD3-208ENST00000566239 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
HACD3-208ENST00000566239 SCNN1DP51172 638 aa17.23■□□□□ 0.35
HACD3-208ENST00000566239 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
HACD3-208ENST00000566239 SF3B3Q15393 1217 aaKnown RBP17.23■□□□□ 0.35
HACD3-208ENST00000566239 CCDC30Q5VVM6 783 aa17.23■□□□□ 0.35
HACD3-208ENST00000566239 PHAXQ9H814 394 aaKnown RBP17.23■□□□□ 0.35
HACD3-208ENST00000566239 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
HACD3-208ENST00000566239 HSPA1AP0DMV8 641 aaKnown RBP17.22■□□□□ 0.35
HACD3-208ENST00000566239 HSPA1BP0DMV9 641 aaKnown RBP17.22■□□□□ 0.35
HACD3-208ENST00000566239 EPS15P42566 896 aa17.22■□□□□ 0.35
HACD3-208ENST00000566239 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
HACD3-208ENST00000566239 USP50Q70EL3 339 aaPredicted RBP17.22■□□□□ 0.35
HACD3-208ENST00000566239 C8orf58Q8NAV2 365 aa17.22■□□□□ 0.35
HACD3-208ENST00000566239 CNTNAP1P78357 1384 aa17.22■□□□□ 0.35
HACD3-208ENST00000566239 IRS4O14654 1257 aaPredicted RBP17.21■□□□□ 0.35
HACD3-208ENST00000566239 CXCL9Q07325 125 aa17.21■□□□□ 0.35
HACD3-208ENST00000566239 ZBTB38Q8NAP3 1195 aaPredicted RBP17.21■□□□□ 0.35
HACD3-208ENST00000566239 MYD88Q99836 296 aa17.21■□□□□ 0.35
HACD3-208ENST00000566239 SPEF2Q9C093 1822 aa17.2■□□□□ 0.34
HACD3-208ENST00000566239 TNIP1Q15025 636 aa17.2■□□□□ 0.34
HACD3-208ENST00000566239 CCDC27Q2M243 656 aa17.2■□□□□ 0.34
HACD3-208ENST00000566239 CIAPIN1Q6FI81 312 aa17.2■□□□□ 0.34
HACD3-208ENST00000566239 CCDC191Q8NCU4 936 aa17.2■□□□□ 0.34
HACD3-208ENST00000566239 ADARB2Q9NS39 739 aaKnown RBP17.2■□□□□ 0.34
HACD3-208ENST00000566239 GPRC5DQ9NZD1 345 aa17.2■□□□□ 0.34
HACD3-208ENST00000566239 NSFL1CQ9UNZ2 370 aaKnown RBP17.2■□□□□ 0.34
HACD3-208ENST00000566239 CDHR2Q9BYE9 1310 aa17.2■□□□□ 0.34
HACD3-208ENST00000566239 WASHC4Q2M389 1173 aa17.19■□□□□ 0.34
HACD3-208ENST00000566239 CCDC184Q52MB2 194 aa17.19■□□□□ 0.34
HACD3-208ENST00000566239 CELF1Q92879 486 aaKnown RBP17.19■□□□□ 0.34
HACD3-208ENST00000566239 BCL2L13Q9BXK5 485 aa17.19■□□□□ 0.34
HACD3-208ENST00000566239 STK31Q9BXU1 1019 aa17.19■□□□□ 0.34
HACD3-208ENST00000566239 COL4A1P02462 1669 aa17.18■□□□□ 0.34
HACD3-208ENST00000566239 COL13A1Q5TAT6 717 aaPredicted RBP17.18■□□□□ 0.34
HACD3-208ENST00000566239 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
HACD3-208ENST00000566239 PSME4Q14997 1843 aa17.17■□□□□ 0.34
HACD3-208ENST00000566239 C6orf229H3BNL8 230 aa17.17■□□□□ 0.34
HACD3-208ENST00000566239 RAD17O75943 681 aa17.17■□□□□ 0.34
HACD3-208ENST00000566239 PCCAP05165 728 aaPredicted RBP17.17■□□□□ 0.34
HACD3-208ENST00000566239 GMPSP49915 693 aaPredicted RBP17.17■□□□□ 0.34
HACD3-208ENST00000566239 RPS8P62241 208 aaKnown RBP17.17■□□□□ 0.34
HACD3-208ENST00000566239 TSR2Q969E8 191 aaKnown RBP17.17■□□□□ 0.34
HACD3-208ENST00000566239 EYA3Q99504 573 aa17.17■□□□□ 0.34
HACD3-208ENST00000566239 METTL22Q9BUU2 404 aaPredicted RBP17.17■□□□□ 0.34
HACD3-208ENST00000566239 ABT1Q9ULW3 272 aaKnown RBP17.17■□□□□ 0.34
HACD3-208ENST00000566239 ANP32CO43423 234 aa17.16■□□□□ 0.34
HACD3-208ENST00000566239 PDE8AO60658 829 aa17.16■□□□□ 0.34
HACD3-208ENST00000566239 DEFB115Q30KQ5 88 aa17.16■□□□□ 0.34
HACD3-208ENST00000566239 CCDC152Q4G0S7 254 aa17.16■□□□□ 0.34
HACD3-208ENST00000566239 WWC1Q8IX03 1113 aa17.16■□□□□ 0.34
HACD3-208ENST00000566239 TSPYL6Q8N831 410 aa17.16■□□□□ 0.34
HACD3-208ENST00000566239 MRS2Q9HD23 443 aa17.16■□□□□ 0.34
HACD3-208ENST00000566239 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
HACD3-208ENST00000566239 RASSF10A6NK89 507 aa17.15■□□□□ 0.34
HACD3-208ENST00000566239 VEGFBP49765 207 aa17.15■□□□□ 0.34
HACD3-208ENST00000566239 GPSM2P81274 684 aa17.15■□□□□ 0.34
HACD3-208ENST00000566239 NEXNQ0ZGT2 675 aa17.15■□□□□ 0.34
HACD3-208ENST00000566239 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
HACD3-208ENST00000566239 KSR2Q6VAB6 950 aa17.15■□□□□ 0.34
HACD3-208ENST00000566239 MAP3K2Q9Y2U5 619 aa17.15■□□□□ 0.34
HACD3-208ENST00000566239 PCNTO95613 3336 aa17.15■□□□□ 0.34
HACD3-208ENST00000566239 IL16Q14005 1332 aa17.15■□□□□ 0.34
HACD3-208ENST00000566239 YDJCA8MPS7 323 aa17.14■□□□□ 0.33
HACD3-208ENST00000566239 RIMBP2O15034 1052 aa17.14■□□□□ 0.33
HACD3-208ENST00000566239 TWISTNBQ3B726 338 aaPredicted RBP17.14■□□□□ 0.33
HACD3-208ENST00000566239 TNS4Q8IZW8 715 aa17.14■□□□□ 0.33
HACD3-208ENST00000566239 SCN9AQ15858 1988 aa17.13■□□□□ 0.33
HACD3-208ENST00000566239 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
HACD3-208ENST00000566239 ZNF316A6NFI3 1004 aaPredicted RBP17.13■□□□□ 0.33
HACD3-208ENST00000566239 H7C1D1 291 aa17.13■□□□□ 0.33
HACD3-208ENST00000566239 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
HACD3-208ENST00000566239 AIDAQ96BJ3 306 aa17.13■□□□□ 0.33
HACD3-208ENST00000566239 DBNDD1Q9H9R9 158 aa17.13■□□□□ 0.33
HACD3-208ENST00000566239 POLLQ9UGP5 575 aa17.13■□□□□ 0.33
HACD3-208ENST00000566239 CNOT7Q9UIV1 285 aaKnown RBP17.13■□□□□ 0.33
HACD3-208ENST00000566239 THSD7BQ9C0I4 1608 aa17.12■□□□□ 0.33
HACD3-208ENST00000566239 TBC1D16Q8TBP0 767 aa17.12■□□□□ 0.33
HACD3-208ENST00000566239 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
HACD3-208ENST00000566239 ZC3H12CQ9C0D7 883 aaKnown RBP17.12■□□□□ 0.33
HACD3-208ENST00000566239 SEC31BQ9NQW1 1179 aa17.12■□□□□ 0.33
HACD3-208ENST00000566239 PODXL2Q9NZ53 605 aa17.12■□□□□ 0.33
HACD3-208ENST00000566239 ANKIB1Q9P2G1 1089 aa17.12■□□□□ 0.33
HACD3-208ENST00000566239 G3V3G9 751 aa17.11■□□□□ 0.33
HACD3-208ENST00000566239 ECE2O60344 883 aa17.11■□□□□ 0.33
HACD3-208ENST00000566239 DCAF8Q5TAQ9 597 aa17.11■□□□□ 0.33
HACD3-208ENST00000566239 ANKRD18AQ8IVF6 992 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms