RNA–Protein interactions for RNA: ENST00000565677.5

STUB1-205, Transcript of STIP1 homology and U-box containing protein 1, human

TSL 1 (best) BASIC

Gene STUB1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STUB1-205	ENST00000565677	C3orf67	Q6ZVT6	689 aa		32.7	■■■□□ 2.82
STUB1-205	ENST00000565677	GCC1	Q96CN9	775 aa		32.7	■■■□□ 2.82
STUB1-205	ENST00000565677	PA2G4	Q9UQ80	394 aa	Known RBP	32.7	■■■□□ 2.82
STUB1-205	ENST00000565677	CASZ1	Q86V15	1759 aa		32.69	■■■□□ 2.82
STUB1-205	ENST00000565677	EXOC6B	Q9Y2D4	811 aa		32.69	■■■□□ 2.82
STUB1-205	ENST00000565677	NRXN2	Q9P2S2	1712 aa		32.69	■■■□□ 2.82
STUB1-205	ENST00000565677	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.68	■■■□□ 2.82
STUB1-205	ENST00000565677	KLHDC4	Q8TBB5	520 aa		32.68	■■■□□ 2.82
STUB1-205	ENST00000565677	GREM2	Q9H772	168 aa		32.68	■■■□□ 2.82
STUB1-205	ENST00000565677	PARP3	Q9Y6F1	533 aa		32.67	■■■□□ 2.82
STUB1-205	ENST00000565677	SLC16A10	Q8TF71	515 aa		32.66	■■■□□ 2.82
STUB1-205	ENST00000565677	SURF6	O75683	361 aa	Known RBP	32.66	■■■□□ 2.82
STUB1-205	ENST00000565677	ST5	P78524	1137 aa		32.65	■■■□□ 2.82
STUB1-205	ENST00000565677	PTPN12	Q05209	780 aa	Known RBP	32.65	■■■□□ 2.82
STUB1-205	ENST00000565677	NOP58	Q9Y2X3	529 aa	Known RBP	32.64	■■■□□ 2.82
STUB1-205	ENST00000565677	CCDC57	Q2TAC2	916 aa		32.63	■■■□□ 2.81
STUB1-205	ENST00000565677	COPRS	Q9NQ92	184 aa		32.63	■■■□□ 2.81
STUB1-205	ENST00000565677	RIC1	Q4ADV7	1423 aa		32.63	■■■□□ 2.81
STUB1-205	ENST00000565677	APBB1	O00213	710 aa		32.62	■■■□□ 2.81
STUB1-205	ENST00000565677	ITGA6	P23229	1130 aa		32.62	■■■□□ 2.81
STUB1-205	ENST00000565677	IFIT5	Q13325	482 aa	Known RBP	32.62	■■■□□ 2.81
STUB1-205	ENST00000565677	SF3B3	Q15393	1217 aa	Known RBP	32.62	■■■□□ 2.81
STUB1-205	ENST00000565677	CCDC152	Q4G0S7	254 aa		32.62	■■■□□ 2.81
STUB1-205	ENST00000565677	ZNF594	Q96JF6	807 aa	Predicted RBP	32.62	■■■□□ 2.81
STUB1-205	ENST00000565677	NLRP3	Q96P20	1036 aa		32.62	■■■□□ 2.81
STUB1-205	ENST00000565677	PDZRN3	Q9UPQ7	1066 aa		32.62	■■■□□ 2.81
STUB1-205	ENST00000565677	PSD	A5PKW4	1024 aa	Predicted RBP	32.62	■■■□□ 2.81
STUB1-205	ENST00000565677	SIL1	Q9H173	461 aa		32.62	■■■□□ 2.81
STUB1-205	ENST00000565677	SKAP1	Q86WV1	359 aa		32.61	■■■□□ 2.81
STUB1-205	ENST00000565677	RTL9	Q8NET4	1388 aa		32.6	■■■□□ 2.81
STUB1-205	ENST00000565677	ZBTB7A	O95365	584 aa		32.6	■■■□□ 2.81
STUB1-205	ENST00000565677	ANKRD45	Q5TZF3	282 aa		32.6	■■■□□ 2.81
STUB1-205	ENST00000565677	ANKRD18B	A2A2Z9	1011 aa		32.59	■■■□□ 2.81
STUB1-205	ENST00000565677	NUCB1	Q02818	461 aa		32.59	■■■□□ 2.81
STUB1-205	ENST00000565677	SEC31B	Q9NQW1	1179 aa		32.59	■■■□□ 2.81
STUB1-205	ENST00000565677	ANKRD31	Q8N7Z5	1873 aa		32.58	■■■□□ 2.81
STUB1-205	ENST00000565677	OS9	Q13438	667 aa	Predicted RBP	32.57	■■■□□ 2.8
STUB1-205	ENST00000565677	HSP90AB4P	Q58FF6	505 aa		32.57	■■■□□ 2.8
STUB1-205	ENST00000565677	COL4A1	P02462	1669 aa		32.57	■■■□□ 2.8
STUB1-205	ENST00000565677	SMARCA5	O60264	1052 aa	Predicted RBP	32.56	■■■□□ 2.8
STUB1-205	ENST00000565677	RAB11FIP3	O75154	756 aa		32.56	■■■□□ 2.8
STUB1-205	ENST00000565677	G3BP1	Q13283	466 aa	Known RBP eCLIP	32.56	■■■□□ 2.8
STUB1-205	ENST00000565677	TAF7L	Q5H9L4	462 aa		32.56	■■■□□ 2.8
STUB1-205	ENST00000565677	CHD1L	Q86WJ1	897 aa		32.55	■■■□□ 2.8
STUB1-205	ENST00000565677	LNPK	Q9C0E8	428 aa		32.55	■■■□□ 2.8
STUB1-205	ENST00000565677	PUS3	Q9BZE2	481 aa	Known RBP	32.54	■■■□□ 2.8
STUB1-205	ENST00000565677	MTFR1L	Q9H019	292 aa		32.54	■■■□□ 2.8
STUB1-205	ENST00000565677	LRP5	O75197	1615 aa		32.54	■■■□□ 2.8
STUB1-205	ENST00000565677	LRRC24	Q50LG9	513 aa		32.53	■■■□□ 2.8
STUB1-205	ENST00000565677	BRIP1	Q9BX63	1249 aa		32.53	■■■□□ 2.8
STUB1-205	ENST00000565677	LRRCC1	Q9C099	1032 aa		32.53	■■■□□ 2.8
STUB1-205	ENST00000565677	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.53	■■■□□ 2.8
STUB1-205	ENST00000565677	RHPN1	Q8TCX5	695 aa		32.53	■■■□□ 2.8
STUB1-205	ENST00000565677	TAF1	P21675	1872 aa		32.52	■■■□□ 2.8
STUB1-205	ENST00000565677	EYA2	O00167	538 aa		32.52	■■■□□ 2.8
STUB1-205	ENST00000565677	SASH1	O94885	1247 aa		32.52	■■■□□ 2.8
STUB1-205	ENST00000565677	ATG9A	Q7Z3C6	839 aa		32.52	■■■□□ 2.8
STUB1-205	ENST00000565677	BCL11A	Q9H165	835 aa		32.52	■■■□□ 2.8
STUB1-205	ENST00000565677	CRY2	Q49AN0	593 aa		32.51	■■■□□ 2.79
STUB1-205	ENST00000565677	ERC1	Q8IUD2	1116 aa		32.51	■■■□□ 2.79
STUB1-205	ENST00000565677	KIF1BP	Q96EK5	621 aa		32.51	■■■□□ 2.79
STUB1-205	ENST00000565677	SPEF2	Q9C093	1822 aa		32.5	■■■□□ 2.79
STUB1-205	ENST00000565677	KLRG2	A4D1S0	409 aa	Predicted RBP	32.5	■■■□□ 2.79
STUB1-205	ENST00000565677	CIAO1	O76071	339 aa		32.5	■■■□□ 2.79
STUB1-205	ENST00000565677	PDE4A	P27815	886 aa		32.49	■■■□□ 2.79
STUB1-205	ENST00000565677	IL1RAPL2	Q9NP60	686 aa		32.49	■■■□□ 2.79
STUB1-205	ENST00000565677	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	32.49	■■■□□ 2.79
STUB1-205	ENST00000565677	LDHAL6A	Q6ZMR3	332 aa		32.49	■■■□□ 2.79
STUB1-205	ENST00000565677	CELF1	Q92879	486 aa	Known RBP	32.49	■■■□□ 2.79
STUB1-205	ENST00000565677	CDC5L	Q99459	802 aa	Known RBP	32.49	■■■□□ 2.79
STUB1-205	ENST00000565677	ZBTB47	Q9UFB7	747 aa	Predicted RBP	32.49	■■■□□ 2.79
STUB1-205	ENST00000565677	FBXO3	Q9UK99	471 aa		32.49	■■■□□ 2.79
STUB1-205	ENST00000565677	IL15	P40933	162 aa	Predicted RBP	32.48	■■■□□ 2.79
STUB1-205	ENST00000565677	DDX46	Q7L014	1031 aa	Known RBP	32.48	■■■□□ 2.79
STUB1-205	ENST00000565677	RPGR	Q92834	1020 aa	Known RBP	32.47	■■■□□ 2.79
STUB1-205	ENST00000565677	IGHMBP2	P38935	993 aa	Known RBP	32.46	■■■□□ 2.79
STUB1-205	ENST00000565677	CNNM1	Q9NRU3	951 aa		32.46	■■■□□ 2.79
STUB1-205	ENST00000565677	RIPOR2	Q9Y4F9	1068 aa		32.46	■■■□□ 2.79
STUB1-205	ENST00000565677	COL11A2	P13942	1736 aa	Predicted RBP	32.46	■■■□□ 2.79
STUB1-205	ENST00000565677	PDE6B	P35913	854 aa		32.45	■■■□□ 2.79
STUB1-205	ENST00000565677	TFCP2	Q12800	502 aa		32.45	■■■□□ 2.79
STUB1-205	ENST00000565677	ANKRD18A	Q8IVF6	992 aa		32.45	■■■□□ 2.79
STUB1-205	ENST00000565677	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.45	■■■□□ 2.79
STUB1-205	ENST00000565677	MPHOSPH8	Q99549	860 aa		32.45	■■■□□ 2.79
STUB1-205	ENST00000565677	C10orf71	Q711Q0	1435 aa		32.45	■■■□□ 2.79
STUB1-205	ENST00000565677	RGS3	P49796	1198 aa		32.45	■■■□□ 2.78
STUB1-205	ENST00000565677	POLD1	P28340	1107 aa		32.44	■■■□□ 2.78
STUB1-205	ENST00000565677	OTUD7A	Q8TE49	926 aa	Predicted RBP	32.43	■■■□□ 2.78
STUB1-205	ENST00000565677	HOXA10	P31260	410 aa	Predicted RBP	32.42	■■■□□ 2.78
STUB1-205	ENST00000565677	RPS8	P62241	208 aa	Known RBP	32.42	■■■□□ 2.78
STUB1-205	ENST00000565677	RBM17	Q96I25	401 aa	Known RBP	32.42	■■■□□ 2.78
STUB1-205	ENST00000565677	SRGN	P10124	158 aa		32.41	■■■□□ 2.78
STUB1-205	ENST00000565677	GRAP	Q13588	217 aa		32.41	■■■□□ 2.78
STUB1-205	ENST00000565677	GRAPL	Q8TC17	118 aa	Predicted RBP	32.41	■■■□□ 2.78
STUB1-205	ENST00000565677	SGIP1	Q9BQI5	828 aa		32.41	■■■□□ 2.78
STUB1-205	ENST00000565677	METTL24	Q5JXM2	366 aa		32.4	■■■□□ 2.78
STUB1-205	ENST00000565677	CLASRP	Q8N2M8	674 aa	Known RBP	32.4	■■■□□ 2.78
STUB1-205	ENST00000565677	BSDC1	Q9NW68	430 aa	Predicted RBP	32.4	■■■□□ 2.78
STUB1-205	ENST00000565677	C2CD5	Q86YS7	1000 aa		32.39	■■■□□ 2.78
STUB1-205	ENST00000565677	CEP126	Q9P2H0	1117 aa		32.39	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms