RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 GCKRQ14397 625 aa23.79■■□□□ 1.4
CMTM3-210ENST00000565666 UBE3BQ7Z3V4 1068 aa23.79■■□□□ 1.4
CMTM3-210ENST00000565666 MRPL50Q8N5N7 158 aaKnown RBP23.79■■□□□ 1.4
CMTM3-210ENST00000565666 ZNF277Q9NRM2 450 aaPredicted RBP23.79■■□□□ 1.4
CMTM3-210ENST00000565666 KDM2BQ8NHM5 1336 aa23.79■■□□□ 1.4
CMTM3-210ENST00000565666 CCDC152Q4G0S7 254 aa23.78■■□□□ 1.4
CMTM3-210ENST00000565666 SSH1Q8WYL5 1049 aa23.78■■□□□ 1.4
CMTM3-210ENST00000565666 PSMD1Q99460 953 aa23.78■■□□□ 1.4
CMTM3-210ENST00000565666 BCL2L13Q9BXK5 485 aa23.78■■□□□ 1.4
CMTM3-210ENST00000565666 SNED1Q8TER0 1413 aa23.77■■□□□ 1.4
CMTM3-210ENST00000565666 MYH3P11055 1940 aa23.77■■□□□ 1.4
CMTM3-210ENST00000565666 CT47B1P0C2W7 299 aaPredicted RBP23.77■■□□□ 1.4
CMTM3-210ENST00000565666 ALDH1L2Q3SY69 923 aa23.77■■□□□ 1.4
CMTM3-210ENST00000565666 SLC4A10Q6U841 1118 aa23.77■■□□□ 1.4
CMTM3-210ENST00000565666 TMC4Q7Z404 712 aa23.77■■□□□ 1.4
CMTM3-210ENST00000565666 SLC51AQ86UW1 340 aa23.77■■□□□ 1.4
CMTM3-210ENST00000565666 SP8Q8IXZ3 490 aa23.77■■□□□ 1.4
CMTM3-210ENST00000565666 SMC4Q9NTJ3 1288 aa23.77■■□□□ 1.4
CMTM3-210ENST00000565666 H7C1W4 665 aa23.76■■□□□ 1.39
CMTM3-210ENST00000565666 IARSP41252 1262 aaKnown RBP23.76■■□□□ 1.39
CMTM3-210ENST00000565666 BEND3Q5T5X7 828 aa23.76■■□□□ 1.39
CMTM3-210ENST00000565666 CELF1Q92879 486 aaKnown RBP23.76■■□□□ 1.39
CMTM3-210ENST00000565666 CCDC85AQ96PX6 553 aaPredicted RBP23.76■■□□□ 1.39
CMTM3-210ENST00000565666 PTPRCP08575 1304 aa23.75■■□□□ 1.39
CMTM3-210ENST00000565666 CTSWP56202 376 aa23.74■■□□□ 1.39
CMTM3-210ENST00000565666 DPY19L2Q6NUT2 758 aa23.74■■□□□ 1.39
CMTM3-210ENST00000565666 NMRK2Q9NPI5 230 aa23.74■■□□□ 1.39
CMTM3-210ENST00000565666 LRRC37AA6NMS7 1700 aa23.73■■□□□ 1.39
CMTM3-210ENST00000565666 GLTPD2A6NH11 291 aa23.73■■□□□ 1.39
CMTM3-210ENST00000565666 DPP8Q6V1X1 898 aaPredicted RBP23.73■■□□□ 1.39
CMTM3-210ENST00000565666 MPNDQ8N594 471 aa23.73■■□□□ 1.39
CMTM3-210ENST00000565666 SEC31BQ9NQW1 1179 aa23.73■■□□□ 1.39
CMTM3-210ENST00000565666 COL4A1P02462 1669 aa23.73■■□□□ 1.39
CMTM3-210ENST00000565666 RPS8P62241 208 aaKnown RBP23.72■■□□□ 1.39
CMTM3-210ENST00000565666 SUPT20HQ8NEM7 779 aa23.72■■□□□ 1.39
CMTM3-210ENST00000565666 SRCIN1Q9C0H9 1055 aa23.72■■□□□ 1.39
CMTM3-210ENST00000565666 ALDH1L1O75891 902 aa23.71■■□□□ 1.39
CMTM3-210ENST00000565666 JDP2Q8WYK2 163 aa23.71■■□□□ 1.39
CMTM3-210ENST00000565666 KIF3CO14782 793 aa23.7■■□□□ 1.38
CMTM3-210ENST00000565666 CASP7P55210 303 aa23.7■■□□□ 1.38
CMTM3-210ENST00000565666 LARGE2Q8N3Y3 721 aa23.7■■□□□ 1.38
CMTM3-210ENST00000565666 TTLL11Q8NHH1 800 aa23.7■■□□□ 1.38
CMTM3-210ENST00000565666 RRAGCQ9HB90 399 aa23.7■■□□□ 1.38
CMTM3-210ENST00000565666 C9orf78Q9NZ63 289 aaPredicted RBP23.7■■□□□ 1.38
CMTM3-210ENST00000565666 PPIP5K2O43314 1243 aa23.69■■□□□ 1.38
CMTM3-210ENST00000565666 ANKRD18AQ8IVF6 992 aa23.69■■□□□ 1.38
CMTM3-210ENST00000565666 CDC5LQ99459 802 aaKnown RBP23.69■■□□□ 1.38
CMTM3-210ENST00000565666 PLA2G12BQ9BX93 195 aa23.69■■□□□ 1.38
CMTM3-210ENST00000565666 SPEF2Q9C093 1822 aa23.68■■□□□ 1.38
CMTM3-210ENST00000565666 GRM8O00222 908 aa23.68■■□□□ 1.38
CMTM3-210ENST00000565666 C1QTNF8P60827 252 aa23.68■■□□□ 1.38
CMTM3-210ENST00000565666 C16orf71Q8IYS4 520 aaPredicted RBP23.68■■□□□ 1.38
CMTM3-210ENST00000565666 RTFDC1Q9BY42 306 aaPredicted RBP23.68■■□□□ 1.38
CMTM3-210ENST00000565666 GREM2Q9H772 168 aa23.68■■□□□ 1.38
CMTM3-210ENST00000565666 NSFL1CQ9UNZ2 370 aaKnown RBP23.68■■□□□ 1.38
CMTM3-210ENST00000565666 ZBED9Q6R2W3 1325 aa23.67■■□□□ 1.38
CMTM3-210ENST00000565666 AOC3Q16853 763 aa23.67■■□□□ 1.38
CMTM3-210ENST00000565666 DDNO94850 711 aaPredicted RBP23.66■■□□□ 1.38
CMTM3-210ENST00000565666 RARSP54136 660 aaKnown RBP23.66■■□□□ 1.38
CMTM3-210ENST00000565666 NIM1KQ8IY84 436 aa23.66■■□□□ 1.38
CMTM3-210ENST00000565666 VPS33BQ9H267 617 aa23.66■■□□□ 1.38
CMTM3-210ENST00000565666 RTL9Q8NET4 1388 aa23.65■■□□□ 1.38
CMTM3-210ENST00000565666 WDR90Q96KV7 1748 aa23.65■■□□□ 1.38
CMTM3-210ENST00000565666 GPSM2P81274 684 aa23.65■■□□□ 1.38
CMTM3-210ENST00000565666 DUOX1Q9NRD9 1551 aa23.65■■□□□ 1.38
CMTM3-210ENST00000565666 ZNF541Q9H0D2 1346 aa23.64■■□□□ 1.38
CMTM3-210ENST00000565666 COL4A5P29400 1685 aa23.64■■□□□ 1.38
CMTM3-210ENST00000565666 FZD9O00144 591 aa23.64■■□□□ 1.37
CMTM3-210ENST00000565666 EIF6P56537 245 aaKnown RBP23.64■■□□□ 1.37
CMTM3-210ENST00000565666 NOB1Q9ULX3 412 aaKnown RBP23.64■■□□□ 1.37
CMTM3-210ENST00000565666 CHMP3Q9Y3E7 222 aa23.64■■□□□ 1.37
CMTM3-210ENST00000565666 C6orf229H3BNL8 230 aa23.63■■□□□ 1.37
CMTM3-210ENST00000565666 VEGFAP15692 232 aaPredicted RBP23.63■■□□□ 1.37
CMTM3-210ENST00000565666 ITGA6P23229 1130 aa23.63■■□□□ 1.37
CMTM3-210ENST00000565666 FAM161AQ3B820 660 aa23.63■■□□□ 1.37
CMTM3-210ENST00000565666 ANKIB1Q9P2G1 1089 aa23.63■■□□□ 1.37
CMTM3-210ENST00000565666 KIF16BQ96L93 1317 aa23.62■■□□□ 1.37
CMTM3-210ENST00000565666 CSF1RP07333 972 aa23.62■■□□□ 1.37
CMTM3-210ENST00000565666 IGHMBP2P38935 993 aaKnown RBP23.62■■□□□ 1.37
CMTM3-210ENST00000565666 BRPF1P55201 1214 aaPredicted RBP23.62■■□□□ 1.37
CMTM3-210ENST00000565666 API5Q9BZZ5 524 aaKnown RBP23.62■■□□□ 1.37
CMTM3-210ENST00000565666 LTBP1Q14766 1721 aa23.62■■□□□ 1.37
CMTM3-210ENST00000565666 TOMM70O94826 608 aa23.61■■□□□ 1.37
CMTM3-210ENST00000565666 FOXO4P98177 505 aa23.61■■□□□ 1.37
CMTM3-210ENST00000565666 KIAA2012Q0VF49 1180 aa23.61■■□□□ 1.37
CMTM3-210ENST00000565666 EYA3Q99504 573 aa23.61■■□□□ 1.37
CMTM3-210ENST00000565666 ANKRD18BA2A2Z9 1011 aa23.6■■□□□ 1.37
CMTM3-210ENST00000565666 WASHC4Q2M389 1173 aa23.6■■□□□ 1.37
CMTM3-210ENST00000565666 BSDC1Q9NW68 430 aaPredicted RBP23.6■■□□□ 1.37
CMTM3-210ENST00000565666 POLLQ9UGP5 575 aa23.6■■□□□ 1.37
CMTM3-210ENST00000565666 GJA3Q9Y6H8 435 aa23.6■■□□□ 1.37
CMTM3-210ENST00000565666 RIMBP2O15034 1052 aa23.59■■□□□ 1.37
CMTM3-210ENST00000565666 UFL1O94874 794 aa23.59■■□□□ 1.37
CMTM3-210ENST00000565666 NBPF7P0C2Y1 421 aaPredicted RBP23.59■■□□□ 1.37
CMTM3-210ENST00000565666 LMBR1LQ6UX01 489 aa23.59■■□□□ 1.37
CMTM3-210ENST00000565666 TBC1D16Q8TBP0 767 aa23.59■■□□□ 1.37
CMTM3-210ENST00000565666 SUCLG2Q96I99 432 aa23.59■■□□□ 1.37
CMTM3-210ENST00000565666 MPHOSPH8Q99549 860 aa23.59■■□□□ 1.37
CMTM3-210ENST00000565666 PODXL2Q9NZ53 605 aa23.59■■□□□ 1.37
CMTM3-210ENST00000565666 GGA1Q9UJY5 639 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms