RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 MIER1Q8N108 512 aa12.41□□□□□ -0.42
CNOT1-207ENST00000565605 XAGE3Q8WTP9 111 aa12.41□□□□□ -0.42
CNOT1-207ENST00000565605 C7orf43Q8WVR3 580 aa12.41□□□□□ -0.42
CNOT1-207ENST00000565605 MYH16Q9H6N6 1097 aa12.41□□□□□ -0.42
CNOT1-207ENST00000565605 HYPKQ9NX55 129 aa12.41□□□□□ -0.42
CNOT1-207ENST00000565605 PDZRN3Q9UPQ7 1066 aa12.41□□□□□ -0.42
CNOT1-207ENST00000565605 PASKQ96RG2 1323 aa12.4□□□□□ -0.42
CNOT1-207ENST00000565605 FAM177BA6PVY3 158 aa12.4□□□□□ -0.42
CNOT1-207ENST00000565605 GOLGA2Q08379 1002 aa12.4□□□□□ -0.42
CNOT1-207ENST00000565605 TWISTNBQ3B726 338 aaPredicted RBP12.4□□□□□ -0.42
CNOT1-207ENST00000565605 STYK1Q6J9G0 422 aa12.4□□□□□ -0.42
CNOT1-207ENST00000565605 TPTE2Q6XPS3 522 aa12.4□□□□□ -0.42
CNOT1-207ENST00000565605 GIGYF2Q6Y7W6 1299 aaKnown RBP12.4□□□□□ -0.42
CNOT1-207ENST00000565605 CNKSR1Q969H4 720 aa12.4□□□□□ -0.42
CNOT1-207ENST00000565605 SLX4Q8IY92 1834 aa12.39□□□□□ -0.43
CNOT1-207ENST00000565605 GPTP24298 496 aa12.39□□□□□ -0.43
CNOT1-207ENST00000565605 GTF2E1P29083 439 aaPredicted RBP12.39□□□□□ -0.43
CNOT1-207ENST00000565605 HSP90AB3PQ58FF7 597 aa12.39□□□□□ -0.43
CNOT1-207ENST00000565605 OLFM4Q6UX06 510 aa12.39□□□□□ -0.43
CNOT1-207ENST00000565605 TSPYL6Q8N831 410 aa12.39□□□□□ -0.43
CNOT1-207ENST00000565605 TAF1DQ9H5J8 278 aaPredicted RBP12.39□□□□□ -0.43
CNOT1-207ENST00000565605 CNTNAP1P78357 1384 aa12.39□□□□□ -0.43
CNOT1-207ENST00000565605 ITGBL1O95965 494 aaPredicted RBP12.38□□□□□ -0.43
CNOT1-207ENST00000565605 VEGFBP49765 207 aa12.38□□□□□ -0.43
CNOT1-207ENST00000565605 PLBD2Q8NHP8 589 aa12.38□□□□□ -0.43
CNOT1-207ENST00000565605 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
CNOT1-207ENST00000565605 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
CNOT1-207ENST00000565605 STK31Q9BXU1 1019 aa12.38□□□□□ -0.43
CNOT1-207ENST00000565605 NYXQ9GZU5 481 aa12.38□□□□□ -0.43
CNOT1-207ENST00000565605 DICER1Q9UPY3 1922 aaKnown RBP12.38□□□□□ -0.43
CNOT1-207ENST00000565605 ZNF521Q96K83 1311 aa12.37□□□□□ -0.43
CNOT1-207ENST00000565605 EXOSC9Q06265 439 aaKnown RBP12.37□□□□□ -0.43
CNOT1-207ENST00000565605 PARP10Q53GL7 1025 aa12.37□□□□□ -0.43
CNOT1-207ENST00000565605 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
CNOT1-207ENST00000565605 LDHDQ86WU2 507 aa12.37□□□□□ -0.43
CNOT1-207ENST00000565605 ZNF34Q8IZ26 560 aa12.37□□□□□ -0.43
CNOT1-207ENST00000565605 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-207ENST00000565605 UBN2Q6ZU65 1347 aa12.37□□□□□ -0.43
CNOT1-207ENST00000565605 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
CNOT1-207ENST00000565605 IQCA1LA6NCM1 817 aa12.36□□□□□ -0.43
CNOT1-207ENST00000565605 DDX58O95786 925 aaKnown RBP12.36□□□□□ -0.43
CNOT1-207ENST00000565605 IER5LQ5T953 404 aa12.36□□□□□ -0.43
CNOT1-207ENST00000565605 SUSD4Q5VX71 490 aa12.36□□□□□ -0.43
CNOT1-207ENST00000565605 PPP1R42Q7Z4L9 355 aa12.36□□□□□ -0.43
CNOT1-207ENST00000565605 PHAXQ9H814 394 aaKnown RBP12.36□□□□□ -0.43
CNOT1-207ENST00000565605 ZNF277Q9NRM2 450 aaPredicted RBP12.36□□□□□ -0.43
CNOT1-207ENST00000565605 KLRG2A4D1S0 409 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-207ENST00000565605 TMEM88BA6NKF7 163 aa12.35□□□□□ -0.43
CNOT1-207ENST00000565605 E9PSI1 815 aa12.35□□□□□ -0.43
CNOT1-207ENST00000565605 TCERG1O14776 1098 aaKnown RBP12.35□□□□□ -0.43
CNOT1-207ENST00000565605 TCIRG1Q13488 830 aa12.35□□□□□ -0.43
CNOT1-207ENST00000565605 EAPPQ56P03 285 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-207ENST00000565605 SOGA3Q5TF21 947 aa12.35□□□□□ -0.43
CNOT1-207ENST00000565605 RIC3Q7Z5B4 369 aa12.35□□□□□ -0.43
CNOT1-207ENST00000565605 PRDM10Q9NQV6 1147 aa12.35□□□□□ -0.43
CNOT1-207ENST00000565605 NTSR2O95665 410 aa12.34□□□□□ -0.43
CNOT1-207ENST00000565605 NPR1P16066 1061 aa12.34□□□□□ -0.43
CNOT1-207ENST00000565605 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
CNOT1-207ENST00000565605 CCDC93Q567U6 631 aa12.34□□□□□ -0.43
CNOT1-207ENST00000565605 NUTM1Q86Y26 1132 aa12.34□□□□□ -0.43
CNOT1-207ENST00000565605 UTP14AQ9BVJ6 771 aaKnown RBP12.34□□□□□ -0.43
CNOT1-207ENST00000565605 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
CNOT1-207ENST00000565605 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
CNOT1-207ENST00000565605 ABCC12Q96J65 1359 aa12.33□□□□□ -0.44
CNOT1-207ENST00000565605 NUP98P52948 1817 aa12.33□□□□□ -0.44
CNOT1-207ENST00000565605 VAMP4O75379 141 aa12.33□□□□□ -0.44
CNOT1-207ENST00000565605 EPHX2P34913 555 aa12.33□□□□□ -0.44
CNOT1-207ENST00000565605 CTCFP49711 727 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-207ENST00000565605 LBX1P52954 281 aa12.33□□□□□ -0.44
CNOT1-207ENST00000565605 MAP1SQ66K74 1059 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-207ENST00000565605 NLRP10Q86W26 655 aa12.33□□□□□ -0.44
CNOT1-207ENST00000565605 HACL1Q9UJ83 578 aa12.33□□□□□ -0.44
CNOT1-207ENST00000565605 CACNA1SQ13698 1873 aa12.33□□□□□ -0.44
CNOT1-207ENST00000565605 RIC1Q4ADV7 1423 aa12.32□□□□□ -0.44
CNOT1-207ENST00000565605 FZD9O00144 591 aa12.32□□□□□ -0.44
CNOT1-207ENST00000565605 CNTROBQ8N137 903 aa12.32□□□□□ -0.44
CNOT1-207ENST00000565605 MARVELD3Q96A59 401 aa12.32□□□□□ -0.44
CNOT1-207ENST00000565605 AIDAQ96BJ3 306 aa12.32□□□□□ -0.44
CNOT1-207ENST00000565605 TRMT112Q9UI30 125 aaKnown RBP12.32□□□□□ -0.44
CNOT1-207ENST00000565605 ARFGEF2Q9Y6D5 1785 aa12.32□□□□□ -0.44
CNOT1-207ENST00000565605 RASSF10A6NK89 507 aa12.31□□□□□ -0.44
CNOT1-207ENST00000565605 ATP5J2-PTCD1G3V325 749 aa12.31□□□□□ -0.44
CNOT1-207ENST00000565605 SLFN5Q08AF3 891 aa12.31□□□□□ -0.44
CNOT1-207ENST00000565605 KSR2Q6VAB6 950 aa12.31□□□□□ -0.44
CNOT1-207ENST00000565605 SYNE4Q8N205 404 aa12.31□□□□□ -0.44
CNOT1-207ENST00000565605 MYD88Q99836 296 aa12.31□□□□□ -0.44
CNOT1-207ENST00000565605 ISCA1Q9BUE6 129 aa12.31□□□□□ -0.44
CNOT1-207ENST00000565605 MAP3K2Q9Y2U5 619 aa12.31□□□□□ -0.44
CNOT1-207ENST00000565605 SCN4AP35499 1836 aa12.31□□□□□ -0.44
CNOT1-207ENST00000565605 SH3TC1Q8TE82 1336 aa12.31□□□□□ -0.44
CNOT1-207ENST00000565605 ANKRD36CQ5JPF3 1778 aa12.3□□□□□ -0.44
CNOT1-207ENST00000565605 ADAMTSL1Q8N6G6 1762 aa12.3□□□□□ -0.44
CNOT1-207ENST00000565605 HSPA8P11142 646 aaKnown RBP12.3□□□□□ -0.44
CNOT1-207ENST00000565605 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
CNOT1-207ENST00000565605 FMR1Q06787 632 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■■□□□ 13.4
CNOT1-207ENST00000565605 NEXNQ0ZGT2 675 aa12.3□□□□□ -0.44
CNOT1-207ENST00000565605 FLIIQ13045 1269 aa12.3□□□□□ -0.44
CNOT1-207ENST00000565605 DEFB115Q30KQ5 88 aa12.3□□□□□ -0.44
CNOT1-207ENST00000565605 SLC51AQ86UW1 340 aa12.3□□□□□ -0.44
CNOT1-207ENST00000565605 RTKN2Q8IZC4 609 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms