RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 DICER1Q9UPY3 1922 aaKnown RBP20.46■□□□□ 0.87
THUMPD1-203ENST00000565248 ARFGEF2Q9Y6D5 1785 aa20.46■□□□□ 0.87
THUMPD1-203ENST00000565248 NEURL1BA8MQ27 555 aa20.45■□□□□ 0.86
THUMPD1-203ENST00000565248 HDAC1Q13547 482 aaPredicted RBP20.45■□□□□ 0.86
THUMPD1-203ENST00000565248 CWF19L2Q2TBE0 894 aaKnown RBP20.45■□□□□ 0.86
THUMPD1-203ENST00000565248 CHADLQ6NUI6 762 aa20.45■□□□□ 0.86
THUMPD1-203ENST00000565248 USP44Q9H0E7 712 aa20.45■□□□□ 0.86
THUMPD1-203ENST00000565248 C1orf115Q9H7X2 142 aa20.45■□□□□ 0.86
THUMPD1-203ENST00000565248 GRM8O00222 908 aa20.44■□□□□ 0.86
THUMPD1-203ENST00000565248 C21orf2O43822 256 aa20.44■□□□□ 0.86
THUMPD1-203ENST00000565248 HMMRO75330 724 aa20.44■□□□□ 0.86
THUMPD1-203ENST00000565248 BRIP1Q9BX63 1249 aa20.44■□□□□ 0.86
THUMPD1-203ENST00000565248 MKRN1Q9UHC7 482 aaKnown RBP20.44■□□□□ 0.86
THUMPD1-203ENST00000565248 IGKV5-2P06315 115 aa20.43■□□□□ 0.86
THUMPD1-203ENST00000565248 TCIRG1Q13488 830 aa20.43■□□□□ 0.86
THUMPD1-203ENST00000565248 GCKRQ14397 625 aa20.43■□□□□ 0.86
THUMPD1-203ENST00000565248 GIGYF2Q6Y7W6 1299 aaKnown RBP20.43■□□□□ 0.86
THUMPD1-203ENST00000565248 CWC25Q9NXE8 425 aaPredicted RBP20.43■□□□□ 0.86
THUMPD1-203ENST00000565248 ZNF219Q9P2Y4 722 aaPredicted RBP20.43■□□□□ 0.86
THUMPD1-203ENST00000565248 ZNF652Q9Y2D9 606 aa20.43■□□□□ 0.86
THUMPD1-203ENST00000565248 CARMIL3Q8ND23 1372 aa20.43■□□□□ 0.86
THUMPD1-203ENST00000565248 FER1L6Q2WGJ9 1857 aa20.42■□□□□ 0.86
THUMPD1-203ENST00000565248 NPHP1O15259 732 aa20.42■□□□□ 0.86
THUMPD1-203ENST00000565248 CCDC191Q8NCU4 936 aa20.42■□□□□ 0.86
THUMPD1-203ENST00000565248 TBC1D2BQ9UPU7 963 aa20.42■□□□□ 0.86
THUMPD1-203ENST00000565248 ATP5J2-PTCD1G3V325 749 aa20.41■□□□□ 0.86
THUMPD1-203ENST00000565248 RGL2O15211 777 aa20.41■□□□□ 0.86
THUMPD1-203ENST00000565248 TRIM28Q13263 835 aaKnown RBP20.41■□□□□ 0.86
THUMPD1-203ENST00000565248 SOGA3Q5TF21 947 aa20.41■□□□□ 0.86
THUMPD1-203ENST00000565248 ANKRD44Q8N8A2 993 aa20.41■□□□□ 0.86
THUMPD1-203ENST00000565248 TAOK3Q9H2K8 898 aa20.41■□□□□ 0.86
THUMPD1-203ENST00000565248 UTYO14607 1347 aa20.41■□□□□ 0.86
THUMPD1-203ENST00000565248 IQCA1LA6NCM1 817 aa20.4■□□□□ 0.86
THUMPD1-203ENST00000565248 CEP85Q6P2H3 762 aa20.4■□□□□ 0.86
THUMPD1-203ENST00000565248 AIDAQ96BJ3 306 aa20.4■□□□□ 0.86
THUMPD1-203ENST00000565248 ISCA1Q9BUE6 129 aa20.4■□□□□ 0.86
THUMPD1-203ENST00000565248 LTBP3Q9NS15 1303 aa20.4■□□□□ 0.86
THUMPD1-203ENST00000565248 LRRFIP2Q9Y608 721 aaKnown RBP20.4■□□□□ 0.86
THUMPD1-203ENST00000565248 ANKRD31Q8N7Z5 1873 aa20.39■□□□□ 0.86
THUMPD1-203ENST00000565248 IGHDP01880 384 aa20.39■□□□□ 0.85
THUMPD1-203ENST00000565248 TBC1D9BQ66K14 1250 aa20.39■□□□□ 0.85
THUMPD1-203ENST00000565248 CNKSR1Q969H4 720 aa20.39■□□□□ 0.85
THUMPD1-203ENST00000565248 DDNO94850 711 aaPredicted RBP20.38■□□□□ 0.85
THUMPD1-203ENST00000565248 NBPF7P0C2Y1 421 aaPredicted RBP20.38■□□□□ 0.85
THUMPD1-203ENST00000565248 PRDM10Q9NQV6 1147 aa20.38■□□□□ 0.85
THUMPD1-203ENST00000565248 CAMTA2O94983 1202 aa20.37■□□□□ 0.85
THUMPD1-203ENST00000565248 PRR5LQ6MZQ0 368 aa20.37■□□□□ 0.85
THUMPD1-203ENST00000565248 GCC1Q96CN9 775 aa20.37■□□□□ 0.85
THUMPD1-203ENST00000565248 SETDB2Q96T68 719 aa20.37■□□□□ 0.85
THUMPD1-203ENST00000565248 CNTNAP1P78357 1384 aa20.36■□□□□ 0.85
THUMPD1-203ENST00000565248 FOXN1O15353 648 aa20.36■□□□□ 0.85
THUMPD1-203ENST00000565248 CTCFP49711 727 aaPredicted RBP20.36■□□□□ 0.85
THUMPD1-203ENST00000565248 ST5P78524 1137 aa20.36■□□□□ 0.85
THUMPD1-203ENST00000565248 ATP8B2P98198 1209 aa20.36■□□□□ 0.85
THUMPD1-203ENST00000565248 HLFQ16534 295 aa20.36■□□□□ 0.85
THUMPD1-203ENST00000565248 STYK1Q6J9G0 422 aa20.36■□□□□ 0.85
THUMPD1-203ENST00000565248 CLEC4GQ6UXB4 293 aa20.36■□□□□ 0.85
THUMPD1-203ENST00000565248 LDHDQ86WU2 507 aa20.36■□□□□ 0.85
THUMPD1-203ENST00000565248 PARP10Q53GL7 1025 aa20.35■□□□□ 0.85
THUMPD1-203ENST00000565248 UBE3BQ7Z3V4 1068 aa20.35■□□□□ 0.85
THUMPD1-203ENST00000565248 CNBD1Q8NA66 436 aa20.35■□□□□ 0.85
THUMPD1-203ENST00000565248 COL11A2P13942 1736 aaPredicted RBP20.35■□□□□ 0.85
THUMPD1-203ENST00000565248 H7C1W4 665 aa20.34■□□□□ 0.85
THUMPD1-203ENST00000565248 GPTP24298 496 aa20.34■□□□□ 0.85
THUMPD1-203ENST00000565248 CCDC24Q8N4L8 307 aa20.34■□□□□ 0.85
THUMPD1-203ENST00000565248 MASTLQ96GX5 879 aa20.34■□□□□ 0.85
THUMPD1-203ENST00000565248 ZBTB47Q9UFB7 747 aaPredicted RBP20.34■□□□□ 0.85
THUMPD1-203ENST00000565248 SCN7AQ01118 1682 aa20.34■□□□□ 0.85
THUMPD1-203ENST00000565248 CACNA1SQ13698 1873 aa20.34■□□□□ 0.85
THUMPD1-203ENST00000565248 SCN4AP35499 1836 aa20.34■□□□□ 0.85
THUMPD1-203ENST00000565248 TMEM88BA6NKF7 163 aa20.33■□□□□ 0.85
THUMPD1-203ENST00000565248 PCCAP05165 728 aaPredicted RBP20.33■□□□□ 0.85
THUMPD1-203ENST00000565248 POTEIP0CG38 1075 aa20.33■□□□□ 0.85
THUMPD1-203ENST00000565248 POTEJP0CG39 1038 aa20.33■□□□□ 0.85
THUMPD1-203ENST00000565248 PRPF40BQ6NWY9 871 aaKnown RBP20.33■□□□□ 0.85
THUMPD1-203ENST00000565248 NLRP10Q86W26 655 aa20.33■□□□□ 0.85
THUMPD1-203ENST00000565248 SIRT2Q8IXJ6 389 aa20.33■□□□□ 0.85
THUMPD1-203ENST00000565248 SMC5Q8IY18 1101 aa20.33■□□□□ 0.85
THUMPD1-203ENST00000565248 ZNF34Q8IZ26 560 aa20.33■□□□□ 0.85
THUMPD1-203ENST00000565248 SUCLG2Q96I99 432 aa20.33■□□□□ 0.85
THUMPD1-203ENST00000565248 ANKRD36CQ5JPF3 1778 aa20.32■□□□□ 0.84
THUMPD1-203ENST00000565248 SRGNP10124 158 aa20.32■□□□□ 0.84
THUMPD1-203ENST00000565248 HSP90B1P14625 803 aaKnown RBP20.32■□□□□ 0.84
THUMPD1-203ENST00000565248 MTX1Q13505 466 aa20.32■□□□□ 0.84
THUMPD1-203ENST00000565248 ZBTB38Q8NAP3 1195 aaPredicted RBP20.32■□□□□ 0.84
THUMPD1-203ENST00000565248 SLX4Q8IY92 1834 aa20.32■□□□□ 0.84
THUMPD1-203ENST00000565248 PASKQ96RG2 1323 aa20.31■□□□□ 0.84
THUMPD1-203ENST00000565248 L3MBTL3Q96JM7 780 aaPredicted RBP20.31■□□□□ 0.84
THUMPD1-203ENST00000565248 TAF1DQ9H5J8 278 aaPredicted RBP20.31■□□□□ 0.84
THUMPD1-203ENST00000565248 NIP7Q9Y221 180 aaKnown RBP eCLIP20.31■□□□□ 0.84
THUMPD1-203ENST00000565248 BCORQ6W2J9 1755 aa20.31■□□□□ 0.84
THUMPD1-203ENST00000565248 NUP98P52948 1817 aa20.3■□□□□ 0.84
THUMPD1-203ENST00000565248 SRGAP3O43295 1099 aa20.3■□□□□ 0.84
THUMPD1-203ENST00000565248 VEGFBP49765 207 aa20.3■□□□□ 0.84
THUMPD1-203ENST00000565248 EAPPQ56P03 285 aaPredicted RBP20.3■□□□□ 0.84
THUMPD1-203ENST00000565248 PPP1R42Q7Z4L9 355 aa20.3■□□□□ 0.84
THUMPD1-203ENST00000565248 SSH3Q8TE77 659 aa20.3■□□□□ 0.84
THUMPD1-203ENST00000565248 BICC1Q9H694 974 aaKnown RBP20.3■□□□□ 0.84
THUMPD1-203ENST00000565248 DCTPP1Q9H773 170 aa20.3■□□□□ 0.84
THUMPD1-203ENST00000565248 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms