RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PTPRCP08575 1304 aa10.88□□□□□ -0.67
UBR1-204ENST00000563239 FER1L6Q2WGJ9 1857 aa10.88□□□□□ -0.67
UBR1-204ENST00000563239 SMC4Q9NTJ3 1288 aa10.88□□□□□ -0.67
UBR1-204ENST00000563239 PDE8AO60658 829 aa10.87□□□□□ -0.67
UBR1-204ENST00000563239 C9orf131Q5VYM1 1079 aa10.87□□□□□ -0.67
UBR1-204ENST00000563239 UBE3BQ7Z3V4 1068 aa10.87□□□□□ -0.67
UBR1-204ENST00000563239 NOB1Q9ULX3 412 aaKnown RBP10.87□□□□□ -0.67
UBR1-204ENST00000563239 SBF1O95248 1867 aa10.87□□□□□ -0.67
UBR1-204ENST00000563239 TAF1P21675 1872 aa10.87□□□□□ -0.67
UBR1-204ENST00000563239 LTBP3Q9NS15 1303 aa10.86□□□□□ -0.67
UBR1-204ENST00000563239 PPEF1O14829 653 aaPredicted RBP10.86□□□□□ -0.67
UBR1-204ENST00000563239 CAPN15O75808 1086 aa10.86□□□□□ -0.67
UBR1-204ENST00000563239 BCAR3O75815 825 aa10.86□□□□□ -0.67
UBR1-204ENST00000563239 ALDH1L1O75891 902 aa10.86□□□□□ -0.67
UBR1-204ENST00000563239 GRAPQ13588 217 aa10.86□□□□□ -0.67
UBR1-204ENST00000563239 SLC4A10Q6U841 1118 aa10.86□□□□□ -0.67
UBR1-204ENST00000563239 GRAPLQ8TC17 118 aaPredicted RBP10.86□□□□□ -0.67
UBR1-204ENST00000563239 CELF1Q92879 486 aaKnown RBP10.86□□□□□ -0.67
UBR1-204ENST00000563239 PLA2G12BQ9BX93 195 aa10.86□□□□□ -0.67
UBR1-204ENST00000563239 SEC31BQ9NQW1 1179 aa10.86□□□□□ -0.67
UBR1-204ENST00000563239 BBOX1O75936 387 aa10.85□□□□□ -0.67
UBR1-204ENST00000563239 CTSWP56202 376 aa10.85□□□□□ -0.67
UBR1-204ENST00000563239 FOXO4P98177 505 aa10.85□□□□□ -0.67
UBR1-204ENST00000563239 CCDC93Q567U6 631 aa10.85□□□□□ -0.67
UBR1-204ENST00000563239 EPHA10Q5JZY3 1008 aa10.85□□□□□ -0.67
UBR1-204ENST00000563239 SOGA3Q5TF21 947 aa10.85□□□□□ -0.67
UBR1-204ENST00000563239 DDX46Q7L014 1031 aaKnown RBP10.85□□□□□ -0.67
UBR1-204ENST00000563239 TTLL11Q8NHH1 800 aa10.85□□□□□ -0.67
UBR1-204ENST00000563239 SRCIN1Q9C0H9 1055 aa10.85□□□□□ -0.67
UBR1-204ENST00000563239 ATP6V0A2Q9Y487 856 aa10.85□□□□□ -0.67
UBR1-204ENST00000563239 UTYO14607 1347 aa10.84□□□□□ -0.67
UBR1-204ENST00000563239 GRM8O00222 908 aa10.84□□□□□ -0.67
UBR1-204ENST00000563239 CSF1RP07333 972 aa10.84□□□□□ -0.67
UBR1-204ENST00000563239 HSP90B1P14625 803 aaKnown RBP10.84□□□□□ -0.67
UBR1-204ENST00000563239 LMNB1P20700 586 aa10.84□□□□□ -0.67
UBR1-204ENST00000563239 FKBP4Q02790 459 aaKnown RBP eCLIP10.84□□□□□ -0.67
UBR1-204ENST00000563239 SP8Q8IXZ3 490 aa10.84□□□□□ -0.67
UBR1-204ENST00000563239 RTKN2Q8IZC4 609 aa10.84□□□□□ -0.67
UBR1-204ENST00000563239 KAZALD1Q96I82 304 aa10.84□□□□□ -0.67
UBR1-204ENST00000563239 CCDC85AQ96PX6 553 aaPredicted RBP10.84□□□□□ -0.67
UBR1-204ENST00000563239 TAOK3Q9H2K8 898 aa10.84□□□□□ -0.67
UBR1-204ENST00000563239 RNF181Q9P0P0 153 aa10.84□□□□□ -0.67
UBR1-204ENST00000563239 TNNQ9UQP3 1299 aa10.84□□□□□ -0.67
UBR1-204ENST00000563239 RTL9Q8NET4 1388 aa10.83□□□□□ -0.68
UBR1-204ENST00000563239 NBPF7P0C2Y1 421 aaPredicted RBP10.83□□□□□ -0.68
UBR1-204ENST00000563239 RPS8P62241 208 aaKnown RBP10.83□□□□□ -0.68
UBR1-204ENST00000563239 CCDC152Q4G0S7 254 aa10.83□□□□□ -0.68
UBR1-204ENST00000563239 CC2D2BQ6DHV5 1058 aa10.83□□□□□ -0.68
UBR1-204ENST00000563239 ARHGAP45Q92619 1136 aa10.83□□□□□ -0.68
UBR1-204ENST00000563239 PSMD1Q99460 953 aa10.83□□□□□ -0.68
UBR1-204ENST00000563239 USP44Q9H0E7 712 aa10.83□□□□□ -0.68
UBR1-204ENST00000563239 GREM2Q9H772 168 aa10.83□□□□□ -0.68
UBR1-204ENST00000563239 LRRC37AA6NMS7 1700 aa10.83□□□□□ -0.68
UBR1-204ENST00000563239 COL4A5P29400 1685 aa10.82□□□□□ -0.68
UBR1-204ENST00000563239 SUCLG2Q96I99 432 aa10.82□□□□□ -0.68
UBR1-204ENST00000563239 RTFDC1Q9BY42 306 aaPredicted RBP10.82□□□□□ -0.68
UBR1-204ENST00000563239 API5Q9BZZ5 524 aaKnown RBP10.82□□□□□ -0.68
UBR1-204ENST00000563239 ZNF277Q9NRM2 450 aaPredicted RBP10.82□□□□□ -0.68
UBR1-204ENST00000563239 KIF16BQ96L93 1317 aa10.82□□□□□ -0.68
UBR1-204ENST00000563239 DUOX1Q9NRD9 1551 aa10.82□□□□□ -0.68
UBR1-204ENST00000563239 CCDC88AQ3V6T2 1871 aa10.81□□□□□ -0.68
UBR1-204ENST00000563239 TRIM27P14373 513 aa10.81□□□□□ -0.68
UBR1-204ENST00000563239 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
UBR1-204ENST00000563239 GRIPAP1Q4V328 841 aa10.81□□□□□ -0.68
UBR1-204ENST00000563239 TMC4Q7Z404 712 aa10.81□□□□□ -0.68
UBR1-204ENST00000563239 FOXD4L1Q9NU39 408 aa10.81□□□□□ -0.68
UBR1-204ENST00000563239 C9orf78Q9NZ63 289 aaPredicted RBP10.81□□□□□ -0.68
UBR1-204ENST00000563239 MYH3P11055 1940 aa10.81□□□□□ -0.68
UBR1-204ENST00000563239 LTBP1Q14766 1721 aa10.81□□□□□ -0.68
UBR1-204ENST00000563239 IARSP41252 1262 aaKnown RBP10.8□□□□□ -0.68
UBR1-204ENST00000563239 CCT4P50991 539 aaKnown RBP10.8□□□□□ -0.68
UBR1-204ENST00000563239 GPSM2P81274 684 aa10.8□□□□□ -0.68
UBR1-204ENST00000563239 INTS3Q68E01 1043 aaKnown RBP10.8□□□□□ -0.68
UBR1-204ENST00000563239 LMBR1LQ6UX01 489 aa10.8□□□□□ -0.68
UBR1-204ENST00000563239 ATF7IPQ6VMQ6 1270 aa10.8□□□□□ -0.68
UBR1-204ENST00000563239 MPNDQ8N594 471 aa10.8□□□□□ -0.68
UBR1-204ENST00000563239 ANKRD44Q8N8A2 993 aa10.8□□□□□ -0.68
UBR1-204ENST00000563239 TIAM2Q8IVF5 1701 aa10.8□□□□□ -0.68
UBR1-204ENST00000563239 ZC3H4Q9UPT8 1303 aaKnown RBP10.8□□□□□ -0.68
UBR1-204ENST00000563239 DICER1Q9UPY3 1922 aaKnown RBP10.8□□□□□ -0.68
UBR1-204ENST00000563239 ITGA6P23229 1130 aa10.79□□□□□ -0.68
UBR1-204ENST00000563239 RABL6Q3YEC7 729 aaPredicted RBP10.79□□□□□ -0.68
UBR1-204ENST00000563239 DPP8Q6V1X1 898 aaPredicted RBP10.79□□□□□ -0.68
UBR1-204ENST00000563239 ANKRD18AQ8IVF6 992 aa10.79□□□□□ -0.68
UBR1-204ENST00000563239 ZNF526Q8TF50 670 aaPredicted RBP10.79□□□□□ -0.68
UBR1-204ENST00000563239 FRAT1Q92837 279 aaPredicted RBP10.79□□□□□ -0.68
UBR1-204ENST00000563239 POLLQ9UGP5 575 aa10.79□□□□□ -0.68
UBR1-204ENST00000563239 WTIPA6NIX2 430 aaPredicted RBP10.78□□□□□ -0.68
UBR1-204ENST00000563239 IPO8O15397 1037 aaKnown RBP10.78□□□□□ -0.68
UBR1-204ENST00000563239 CDC5LQ99459 802 aaKnown RBP10.78□□□□□ -0.68
UBR1-204ENST00000563239 BICC1Q9H694 974 aaKnown RBP10.78□□□□□ -0.68
UBR1-204ENST00000563239 BSDC1Q9NW68 430 aaPredicted RBP10.78□□□□□ -0.68
UBR1-204ENST00000563239 PODXL2Q9NZ53 605 aa10.78□□□□□ -0.68
UBR1-204ENST00000563239 MINPP1Q9UNW1 487 aa10.78□□□□□ -0.68
UBR1-204ENST00000563239 NSFL1CQ9UNZ2 370 aaKnown RBP10.78□□□□□ -0.68
UBR1-204ENST00000563239 GLTPD2A6NH11 291 aa10.77□□□□□ -0.69
UBR1-204ENST00000563239 FZD9O00144 591 aa10.77□□□□□ -0.69
UBR1-204ENST00000563239 RLBP1P12271 317 aa10.77□□□□□ -0.69
UBR1-204ENST00000563239 AOC3Q16853 763 aa10.77□□□□□ -0.69
UBR1-204ENST00000563239 ZKSCAN2Q63HK3 967 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms