RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 EPS15P42566 896 aa20.17■□□□□ 0.82
USB1-208ENST00000563207 MAP1SQ66K74 1059 aaPredicted RBP20.17■□□□□ 0.82
USB1-208ENST00000563207 JARID2Q92833 1246 aaPredicted RBP20.17■□□□□ 0.82
USB1-208ENST00000563207 TSR2Q969E8 191 aaKnown RBP20.17■□□□□ 0.82
USB1-208ENST00000563207 HYPKQ9NX55 129 aa20.17■□□□□ 0.82
USB1-208ENST00000563207 CLEC11AQ9Y240 323 aa20.17■□□□□ 0.82
USB1-208ENST00000563207 PASKQ96RG2 1323 aa20.17■□□□□ 0.82
USB1-208ENST00000563207 SCNN1DP51172 638 aa20.16■□□□□ 0.82
USB1-208ENST00000563207 FMR1Q06787 632 aaKnown RBP eCLIP20.16■□□□□ 0.82
USB1-208ENST00000563207 MKRN1Q9UHC7 482 aaKnown RBP20.16■□□□□ 0.82
USB1-208ENST00000563207 BBOX1O75936 387 aa20.15■□□□□ 0.82
USB1-208ENST00000563207 EIF6P56537 245 aaKnown RBP20.15■□□□□ 0.82
USB1-208ENST00000563207 GOLGA2Q08379 1002 aa20.15■□□□□ 0.82
USB1-208ENST00000563207 DDX46Q7L014 1031 aaKnown RBP20.15■□□□□ 0.82
USB1-208ENST00000563207 SP8Q8IXZ3 490 aa20.15■□□□□ 0.82
USB1-208ENST00000563207 CELF1Q92879 486 aaKnown RBP20.15■□□□□ 0.82
USB1-208ENST00000563207 CHMP4AQ9BY43 222 aa20.15■□□□□ 0.82
USB1-208ENST00000563207 MYH16Q9H6N6 1097 aa20.15■□□□□ 0.82
USB1-208ENST00000563207 DUOX1Q9NRD9 1551 aa20.15■□□□□ 0.82
USB1-208ENST00000563207 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.81
USB1-208ENST00000563207 GRAPQ13588 217 aa20.14■□□□□ 0.81
USB1-208ENST00000563207 COL13A1Q5TAT6 717 aaPredicted RBP20.14■□□□□ 0.81
USB1-208ENST00000563207 DPP8Q6V1X1 898 aaPredicted RBP20.14■□□□□ 0.81
USB1-208ENST00000563207 RIC3Q7Z5B4 369 aa20.14■□□□□ 0.81
USB1-208ENST00000563207 NIM1KQ8IY84 436 aa20.14■□□□□ 0.81
USB1-208ENST00000563207 GRAPLQ8TC17 118 aaPredicted RBP20.14■□□□□ 0.81
USB1-208ENST00000563207 RTFDC1Q9BY42 306 aaPredicted RBP20.14■□□□□ 0.81
USB1-208ENST00000563207 E9PSI1 815 aa20.13■□□□□ 0.81
USB1-208ENST00000563207 CXCL9Q07325 125 aa20.13■□□□□ 0.81
USB1-208ENST00000563207 GRIPAP1Q4V328 841 aa20.13■□□□□ 0.81
USB1-208ENST00000563207 MPNDQ8N594 471 aa20.13■□□□□ 0.81
USB1-208ENST00000563207 MYD88Q99836 296 aa20.13■□□□□ 0.81
USB1-208ENST00000563207 CREBZFQ9NS37 354 aa20.13■□□□□ 0.81
USB1-208ENST00000563207 LRRC37AA6NMS7 1700 aa20.13■□□□□ 0.81
USB1-208ENST00000563207 CNTROBQ8N137 903 aa20.12■□□□□ 0.81
USB1-208ENST00000563207 YDJCA8MPS7 323 aa20.11■□□□□ 0.81
USB1-208ENST00000563207 IRS4O14654 1257 aaPredicted RBP20.11■□□□□ 0.81
USB1-208ENST00000563207 SF3B3Q15393 1217 aaKnown RBP20.11■□□□□ 0.81
USB1-208ENST00000563207 FANCIQ9NVI1 1328 aa20.1■□□□□ 0.81
USB1-208ENST00000563207 RAD17O75943 681 aa20.1■□□□□ 0.81
USB1-208ENST00000563207 HSPA1AP0DMV8 641 aaKnown RBP20.1■□□□□ 0.81
USB1-208ENST00000563207 HSPA1BP0DMV9 641 aaKnown RBP20.1■□□□□ 0.81
USB1-208ENST00000563207 TRIM28Q13263 835 aaKnown RBP20.1■□□□□ 0.81
USB1-208ENST00000563207 PNMA8AQ86V59 439 aaPredicted RBP20.1■□□□□ 0.81
USB1-208ENST00000563207 GPR101Q96P66 508 aaPredicted RBP20.1■□□□□ 0.81
USB1-208ENST00000563207 TMX4Q9H1E5 349 aaPredicted RBP20.1■□□□□ 0.81
USB1-208ENST00000563207 SEC31BQ9NQW1 1179 aa20.1■□□□□ 0.81
USB1-208ENST00000563207 ZNRF3Q9ULT6 936 aa20.1■□□□□ 0.81
USB1-208ENST00000563207 SHTN1A0MZ66 631 aa20.09■□□□□ 0.81
USB1-208ENST00000563207 KIAA2012Q0VF49 1180 aa20.09■□□□□ 0.81
USB1-208ENST00000563207 ZBED9Q6R2W3 1325 aa20.08■□□□□ 0.81
USB1-208ENST00000563207 LMOD1P29536 600 aaPredicted RBP20.08■□□□□ 0.81
USB1-208ENST00000563207 GMPSP49915 693 aaPredicted RBP20.08■□□□□ 0.81
USB1-208ENST00000563207 GPSM2P81274 684 aa20.08■□□□□ 0.81
USB1-208ENST00000563207 SLFN5Q08AF3 891 aa20.08■□□□□ 0.81
USB1-208ENST00000563207 G2E3Q7L622 706 aa20.08■□□□□ 0.81
USB1-208ENST00000563207 SUPT20HQ8NEM7 779 aa20.08■□□□□ 0.81
USB1-208ENST00000563207 CCDC85AQ96PX6 553 aaPredicted RBP20.08■□□□□ 0.81
USB1-208ENST00000563207 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.81
USB1-208ENST00000563207 POLLQ9UGP5 575 aa20.08■□□□□ 0.81
USB1-208ENST00000563207 TMEM88BA6NKF7 163 aa20.07■□□□□ 0.8
USB1-208ENST00000563207 TRAF5O00463 557 aa20.07■□□□□ 0.8
USB1-208ENST00000563207 RIMBP2O15034 1052 aa20.07■□□□□ 0.8
USB1-208ENST00000563207 ZBTB38Q8NAP3 1195 aaPredicted RBP20.07■□□□□ 0.8
USB1-208ENST00000563207 KCNQ5Q9NR82 932 aa20.07■□□□□ 0.8
USB1-208ENST00000563207 GPRC5DQ9NZD1 345 aa20.07■□□□□ 0.8
USB1-208ENST00000563207 NSFL1CQ9UNZ2 370 aaKnown RBP20.07■□□□□ 0.8
USB1-208ENST00000563207 MAP3K2Q9Y2U5 619 aa20.07■□□□□ 0.8
USB1-208ENST00000563207 CNTNAP1P78357 1384 aa20.07■□□□□ 0.8
USB1-208ENST00000563207 VEGFBP49765 207 aa20.06■□□□□ 0.8
USB1-208ENST00000563207 CCDC30Q5VVM6 783 aa20.06■□□□□ 0.8
USB1-208ENST00000563207 TRMT2AQ8IZ69 625 aaKnown RBP20.06■□□□□ 0.8
USB1-208ENST00000563207 METTL22Q9BUU2 404 aaPredicted RBP20.06■□□□□ 0.8
USB1-208ENST00000563207 VPS33BQ9H267 617 aa20.06■□□□□ 0.8
USB1-208ENST00000563207 CACNA1FO60840 1977 aa20.05■□□□□ 0.8
USB1-208ENST00000563207 IGKV5-2P06315 115 aa20.05■□□□□ 0.8
USB1-208ENST00000563207 DBNDD1Q9H9R9 158 aa20.05■□□□□ 0.8
USB1-208ENST00000563207 PI4KAP2A4QPH2 592 aa20.04■□□□□ 0.8
USB1-208ENST00000563207 HIRAP54198 1017 aaPredicted RBP20.04■□□□□ 0.8
USB1-208ENST00000563207 RPS8P62241 208 aaKnown RBP20.04■□□□□ 0.8
USB1-208ENST00000563207 TWISTNBQ3B726 338 aaPredicted RBP20.04■□□□□ 0.8
USB1-208ENST00000563207 CIAPIN1Q6FI81 312 aa20.04■□□□□ 0.8
USB1-208ENST00000563207 PI4KAP1Q8N8J0 262 aa20.04■□□□□ 0.8
USB1-208ENST00000563207 ZBTB12Q9Y330 459 aaPredicted RBP20.04■□□□□ 0.8
USB1-208ENST00000563207 WTIPA6NIX2 430 aaPredicted RBP20.03■□□□□ 0.8
USB1-208ENST00000563207 C6orf229H3BNL8 230 aa20.03■□□□□ 0.8
USB1-208ENST00000563207 PCCAP05165 728 aaPredicted RBP20.03■□□□□ 0.8
USB1-208ENST00000563207 EXOSC9Q06265 439 aaKnown RBP20.03■□□□□ 0.8
USB1-208ENST00000563207 DOK7Q18PE1 504 aa20.03■□□□□ 0.8
USB1-208ENST00000563207 USP50Q70EL3 339 aaPredicted RBP20.03■□□□□ 0.8
USB1-208ENST00000563207 CCDC191Q8NCU4 936 aa20.03■□□□□ 0.8
USB1-208ENST00000563207 CWC25Q9NXE8 425 aaPredicted RBP20.03■□□□□ 0.8
USB1-208ENST00000563207 WASHC4Q2M389 1173 aa20.02■□□□□ 0.8
USB1-208ENST00000563207 CWF19L2Q2TBE0 894 aaKnown RBP20.02■□□□□ 0.8
USB1-208ENST00000563207 CST9Q5W186 159 aa20.02■□□□□ 0.8
USB1-208ENST00000563207 DLK2Q6UY11 383 aa20.02■□□□□ 0.8
USB1-208ENST00000563207 KSR2Q6VAB6 950 aa20.02■□□□□ 0.8
USB1-208ENST00000563207 TMC4Q7Z404 712 aa20.02■□□□□ 0.8
USB1-208ENST00000563207 SCN9AQ15858 1988 aa20.01■□□□□ 0.79
USB1-208ENST00000563207 TBC1D16Q8TBP0 767 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms