RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 CLUAP1Q96AJ1 413 aa19.23■□□□□ 0.67
EDC3-206ENST00000563009 DZIP1LQ8IYY4 767 aaKnown RBP19.22■□□□□ 0.67
EDC3-206ENST00000563009 TTLL11Q8NHH1 800 aa19.22■□□□□ 0.67
EDC3-206ENST00000563009 RTL9Q8NET4 1388 aa19.21■□□□□ 0.67
EDC3-206ENST00000563009 CSF1RP07333 972 aa19.21■□□□□ 0.67
EDC3-206ENST00000563009 RLBP1P12271 317 aa19.21■□□□□ 0.67
EDC3-206ENST00000563009 FOXO4P98177 505 aa19.21■□□□□ 0.67
EDC3-206ENST00000563009 CCDC152Q4G0S7 254 aa19.21■□□□□ 0.67
EDC3-206ENST00000563009 DDX46Q7L014 1031 aaKnown RBP19.21■□□□□ 0.67
EDC3-206ENST00000563009 FTSJ3Q8IY81 847 aaKnown RBP19.21■□□□□ 0.67
EDC3-206ENST00000563009 PELP1Q8IZL8 1130 aaKnown RBP19.21■□□□□ 0.67
EDC3-206ENST00000563009 TMEM57Q8N5G2 664 aa19.21■□□□□ 0.67
EDC3-206ENST00000563009 DCAF8L1A6NGE4 600 aa19.2■□□□□ 0.66
EDC3-206ENST00000563009 GRIN3BO60391 1043 aa19.2■□□□□ 0.66
EDC3-206ENST00000563009 C7orf43Q8WVR3 580 aa19.2■□□□□ 0.66
EDC3-206ENST00000563009 KAZALD1Q96I82 304 aa19.2■□□□□ 0.66
EDC3-206ENST00000563009 MS4A1P11836 297 aa19.19■□□□□ 0.66
EDC3-206ENST00000563009 GRAPQ13588 217 aa19.19■□□□□ 0.66
EDC3-206ENST00000563009 EPHA10Q5JZY3 1008 aa19.19■□□□□ 0.66
EDC3-206ENST00000563009 GRAPLQ8TC17 118 aaPredicted RBP19.19■□□□□ 0.66
EDC3-206ENST00000563009 SUCLG2Q96I99 432 aa19.19■□□□□ 0.66
EDC3-206ENST00000563009 COL4A1P02462 1669 aa19.19■□□□□ 0.66
EDC3-206ENST00000563009 TAF1P21675 1872 aa19.19■□□□□ 0.66
EDC3-206ENST00000563009 PLIN1O60240 522 aa19.18■□□□□ 0.66
EDC3-206ENST00000563009 BBOX1O75936 387 aa19.18■□□□□ 0.66
EDC3-206ENST00000563009 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.18■□□□□ 0.66
EDC3-206ENST00000563009 MEIS3Q99687 375 aa19.18■□□□□ 0.66
EDC3-206ENST00000563009 RABL6Q3YEC7 729 aaPredicted RBP19.17■□□□□ 0.66
EDC3-206ENST00000563009 PANK1Q8TE04 598 aa19.17■□□□□ 0.66
EDC3-206ENST00000563009 GREM2Q9H772 168 aa19.17■□□□□ 0.66
EDC3-206ENST00000563009 SEC31BQ9NQW1 1179 aa19.17■□□□□ 0.66
EDC3-206ENST00000563009 PPEF1O14829 653 aaPredicted RBP19.16■□□□□ 0.66
EDC3-206ENST00000563009 C21orf2O43822 256 aa19.16■□□□□ 0.66
EDC3-206ENST00000563009 UBTFL1P0CB47 393 aaPredicted RBP19.16■□□□□ 0.66
EDC3-206ENST00000563009 PDE3AQ14432 1141 aa19.16■□□□□ 0.66
EDC3-206ENST00000563009 SOGA3Q5TF21 947 aa19.16■□□□□ 0.66
EDC3-206ENST00000563009 TMC4Q7Z404 712 aa19.16■□□□□ 0.66
EDC3-206ENST00000563009 CELF1Q92879 486 aaKnown RBP19.16■□□□□ 0.66
EDC3-206ENST00000563009 CCDC85AQ96PX6 553 aaPredicted RBP19.16■□□□□ 0.66
EDC3-206ENST00000563009 BICC1Q9H694 974 aaKnown RBP19.16■□□□□ 0.66
EDC3-206ENST00000563009 SNED1Q8TER0 1413 aa19.16■□□□□ 0.66
EDC3-206ENST00000563009 LRRC37AA6NMS7 1700 aa19.15■□□□□ 0.66
EDC3-206ENST00000563009 GNAI3P08754 354 aa19.15■□□□□ 0.66
EDC3-206ENST00000563009 RPS8P62241 208 aaKnown RBP19.15■□□□□ 0.66
EDC3-206ENST00000563009 FAM161AQ3B820 660 aa19.15■□□□□ 0.66
EDC3-206ENST00000563009 LMBR1LQ6UX01 489 aa19.15■□□□□ 0.66
EDC3-206ENST00000563009 ANKRD44Q8N8A2 993 aa19.15■□□□□ 0.66
EDC3-206ENST00000563009 HDAC5Q9UQL6 1122 aa19.15■□□□□ 0.66
EDC3-206ENST00000563009 ATP6V0A2Q9Y487 856 aa19.15■□□□□ 0.66
EDC3-206ENST00000563009 FER1L6Q2WGJ9 1857 aa19.15■□□□□ 0.66
EDC3-206ENST00000563009 CC2D2BQ6DHV5 1058 aa19.14■□□□□ 0.65
EDC3-206ENST00000563009 ITPRIPQ8IWB1 547 aa19.14■□□□□ 0.65
EDC3-206ENST00000563009 CDC5LQ99459 802 aaKnown RBP19.14■□□□□ 0.65
EDC3-206ENST00000563009 ITGA6P23229 1130 aa19.13■□□□□ 0.65
EDC3-206ENST00000563009 RRP1P56182 461 aaKnown RBP19.13■□□□□ 0.65
EDC3-206ENST00000563009 CCDC93Q567U6 631 aa19.13■□□□□ 0.65
EDC3-206ENST00000563009 OLFM4Q6UX06 510 aa19.13■□□□□ 0.65
EDC3-206ENST00000563009 SP8Q8IXZ3 490 aa19.13■□□□□ 0.65
EDC3-206ENST00000563009 ZNF219Q9P2Y4 722 aaPredicted RBP19.13■□□□□ 0.65
EDC3-206ENST00000563009 ZBTB7BO15156 539 aaPredicted RBP19.12■□□□□ 0.65
EDC3-206ENST00000563009 IFIT5Q13325 482 aaKnown RBP19.12■□□□□ 0.65
EDC3-206ENST00000563009 MVPQ14764 893 aaKnown RBP19.12■□□□□ 0.65
EDC3-206ENST00000563009 GRIPAP1Q4V328 841 aa19.12■□□□□ 0.65
EDC3-206ENST00000563009 C20orf194Q5TEA3 1177 aa19.12■□□□□ 0.65
EDC3-206ENST00000563009 ARHGAP27Q6ZUM4 889 aa19.12■□□□□ 0.65
EDC3-206ENST00000563009 ANKRD18AQ8IVF6 992 aa19.12■□□□□ 0.65
EDC3-206ENST00000563009 LRRFIP2Q9Y608 721 aaKnown RBP19.12■□□□□ 0.65
EDC3-206ENST00000563009 LTBP3Q9NS15 1303 aa19.11■□□□□ 0.65
EDC3-206ENST00000563009 ANKRD18BA2A2Z9 1011 aa19.11■□□□□ 0.65
EDC3-206ENST00000563009 NFKBIEO00221 500 aa19.11■□□□□ 0.65
EDC3-206ENST00000563009 SLC51AQ86UW1 340 aa19.11■□□□□ 0.65
EDC3-206ENST00000563009 RTKN2Q8IZC4 609 aa19.11■□□□□ 0.65
EDC3-206ENST00000563009 CCDC57Q2TAC2 916 aa19.1■□□□□ 0.65
EDC3-206ENST00000563009 BSDC1Q9NW68 430 aaPredicted RBP19.1■□□□□ 0.65
EDC3-206ENST00000563009 COG6Q9Y2V7 657 aa19.1■□□□□ 0.65
EDC3-206ENST00000563009 CHMP3Q9Y3E7 222 aa19.1■□□□□ 0.65
EDC3-206ENST00000563009 SPEF2Q9C093 1822 aa19.09■□□□□ 0.65
EDC3-206ENST00000563009 GNAI2P04899 355 aa19.09■□□□□ 0.65
EDC3-206ENST00000563009 TMX4Q9H1E5 349 aaPredicted RBP19.09■□□□□ 0.65
EDC3-206ENST00000563009 DDX19BQ9UMR2 479 aa19.09■□□□□ 0.65
EDC3-206ENST00000563009 LTBP1Q14766 1721 aa19.08■□□□□ 0.65
EDC3-206ENST00000563009 CHD4Q14839 1912 aa19.08■□□□□ 0.65
EDC3-206ENST00000563009 SBF1O95248 1867 aa19.08■□□□□ 0.65
EDC3-206ENST00000563009 IGHMBP2P38935 993 aaKnown RBP19.08■□□□□ 0.64
EDC3-206ENST00000563009 MTX1Q13505 466 aa19.08■□□□□ 0.64
EDC3-206ENST00000563009 PSMD1Q99460 953 aa19.08■□□□□ 0.64
EDC3-206ENST00000563009 TAOK3Q9H2K8 898 aa19.08■□□□□ 0.64
EDC3-206ENST00000563009 FKBP4Q02790 459 aaKnown RBP eCLIP19.07■□□□□ 0.64
EDC3-206ENST00000563009 RASSF7Q02833 373 aa19.07■□□□□ 0.64
EDC3-206ENST00000563009 DUOX1Q9NRD9 1551 aa19.06■□□□□ 0.64
EDC3-206ENST00000563009 RFX5P48382 616 aaPredicted RBP19.06■□□□□ 0.64
EDC3-206ENST00000563009 PRELPP51888 382 aa19.06■□□□□ 0.64
EDC3-206ENST00000563009 MPHOSPH8Q99549 860 aa19.06■□□□□ 0.64
EDC3-206ENST00000563009 RTFDC1Q9BY42 306 aaPredicted RBP19.06■□□□□ 0.64
EDC3-206ENST00000563009 MINPP1Q9UNW1 487 aa19.06■□□□□ 0.64
EDC3-206ENST00000563009 MPNDQ8N594 471 aa19.05■□□□□ 0.64
EDC3-206ENST00000563009 ZNF594Q96JF6 807 aaPredicted RBP19.05■□□□□ 0.64
EDC3-206ENST00000563009 CHMP4BQ9H444 224 aaKnown RBP19.05■□□□□ 0.64
EDC3-206ENST00000563009 ZBTB40Q9NUA8 1239 aa19.05■□□□□ 0.64
EDC3-206ENST00000563009 PODXL2Q9NZ53 605 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms