RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 RGPD5Q99666 1765 aa25.83■■□□□ 1.73
LINC00565-201ENST00000562710 EDC3Q96F86 508 aaKnown RBP25.83■■□□□ 1.73
LINC00565-201ENST00000562710 MYD88Q99836 296 aa25.83■■□□□ 1.73
LINC00565-201ENST00000562710 CHMP3Q9Y3E7 222 aa25.83■■□□□ 1.73
LINC00565-201ENST00000562710 COPS6Q7L5N1 327 aa25.82■■□□□ 1.72
LINC00565-201ENST00000562710 COPRSQ9NQ92 184 aa25.82■■□□□ 1.72
LINC00565-201ENST00000562710 FAM200AQ8TCP9 573 aa25.82■■□□□ 1.72
LINC00565-201ENST00000562710 SLC52A2Q9HAB3 445 aa25.82■■□□□ 1.72
LINC00565-201ENST00000562710 ATP5JP18859 108 aa25.81■■□□□ 1.72
LINC00565-201ENST00000562710 STK3Q13188 491 aa25.81■■□□□ 1.72
LINC00565-201ENST00000562710 SCN11AQ9UI33 1791 aa25.81■■□□□ 1.72
LINC00565-201ENST00000562710 TPM3P06753 285 aa25.81■■□□□ 1.72
LINC00565-201ENST00000562710 HMGN5P82970 282 aaKnown RBP25.81■■□□□ 1.72
LINC00565-201ENST00000562710 KRT32Q14532 448 aa25.81■■□□□ 1.72
LINC00565-201ENST00000562710 CAMK4Q16566 473 aa25.81■■□□□ 1.72
LINC00565-201ENST00000562710 SPATA32Q96LK8 384 aa25.81■■□□□ 1.72
LINC00565-201ENST00000562710 DBNLQ9UJU6 430 aaKnown RBP25.81■■□□□ 1.72
LINC00565-201ENST00000562710 ERBB3P21860 1342 aa25.8■■□□□ 1.72
LINC00565-201ENST00000562710 TYRO3Q06418 890 aa25.8■■□□□ 1.72
LINC00565-201ENST00000562710 MRVI1Q9Y6F6 885 aa25.8■■□□□ 1.72
LINC00565-201ENST00000562710 NPHP3Q7Z494 1330 aa25.8■■□□□ 1.72
LINC00565-201ENST00000562710 COL15A1P39059 1388 aa25.8■■□□□ 1.72
LINC00565-201ENST00000562710 TFIP11Q9UBB9 837 aaKnown RBP25.8■■□□□ 1.72
LINC00565-201ENST00000562710 TRPM3Q9HCF6 1732 aaPredicted RBP25.79■■□□□ 1.72
LINC00565-201ENST00000562710 GOLGA6L4A6NEF3 574 aa25.79■■□□□ 1.72
LINC00565-201ENST00000562710 TNNI3KQ59H18 835 aa25.79■■□□□ 1.72
LINC00565-201ENST00000562710 KCNF1Q9H3M0 494 aa25.79■■□□□ 1.72
LINC00565-201ENST00000562710 DACT1Q9NYF0 836 aa25.79■■□□□ 1.72
LINC00565-201ENST00000562710 FPGT-TNNI3KV9GXZ4 949 aa25.79■■□□□ 1.72
LINC00565-201ENST00000562710 KDM6AO15550 1401 aaPredicted RBP25.79■■□□□ 1.72
LINC00565-201ENST00000562710 RFX5P48382 616 aaPredicted RBP25.79■■□□□ 1.72
LINC00565-201ENST00000562710 PTPN12Q05209 780 aaKnown RBP25.79■■□□□ 1.72
LINC00565-201ENST00000562710 NFATC2IPQ8NCF5 419 aa25.79■■□□□ 1.72
LINC00565-201ENST00000562710 KIAA1524Q8TCG1 905 aa25.79■■□□□ 1.72
LINC00565-201ENST00000562710 LEO1Q8WVC0 666 aaPredicted RBP25.79■■□□□ 1.72
LINC00565-201ENST00000562710 TNMDQ9H2S6 317 aa25.79■■□□□ 1.72
LINC00565-201ENST00000562710 ANKRD13DQ6ZTN6 518 aa25.78■■□□□ 1.72
LINC00565-201ENST00000562710 GOLGA6L6A8MZA4 724 aa25.77■■□□□ 1.72
LINC00565-201ENST00000562710 TFCP2Q12800 502 aa25.77■■□□□ 1.72
LINC00565-201ENST00000562710 RAPGEF4Q8WZA2 1011 aa25.77■■□□□ 1.72
LINC00565-201ENST00000562710 GTF3C6Q969F1 213 aa25.77■■□□□ 1.72
LINC00565-201ENST00000562710 NEK1Q96PY6 1258 aa25.77■■□□□ 1.72
LINC00565-201ENST00000562710 SPC24Q8NBT2 197 aa25.77■■□□□ 1.72
LINC00565-201ENST00000562710 LRP10Q7Z4F1 713 aa25.76■■□□□ 1.71
LINC00565-201ENST00000562710 ZNF496Q96IT1 587 aaPredicted RBP25.76■■□□□ 1.71
LINC00565-201ENST00000562710 DDX19AQ9NUU7 478 aaKnown RBP25.76■■□□□ 1.71
LINC00565-201ENST00000562710 RFX7Q2KHR2 1363 aa25.76■■□□□ 1.71
LINC00565-201ENST00000562710 GTF2F1P35269 517 aaKnown RBP eCLIP25.76■■□□□ 1.71
LINC00565-201ENST00000562710 KRT28Q7Z3Y7 464 aa25.76■■□□□ 1.71
LINC00565-201ENST00000562710 CKAP2LQ8IYA6 745 aa25.76■■□□□ 1.71
LINC00565-201ENST00000562710 JARID2Q92833 1246 aaPredicted RBP25.76■■□□□ 1.71
LINC00565-201ENST00000562710 ZMYND15Q9H091 742 aa25.76■■□□□ 1.71
LINC00565-201ENST00000562710 RBM43Q6ZSC3 357 aaKnown RBP25.75■■□□□ 1.71
LINC00565-201ENST00000562710 PYCARDQ9ULZ3 195 aa25.75■■□□□ 1.71
LINC00565-201ENST00000562710 ZNF142P52746 1687 aaPredicted RBP25.75■■□□□ 1.71
LINC00565-201ENST00000562710 JAK2O60674 1132 aa25.75■■□□□ 1.71
LINC00565-201ENST00000562710 PHKG2P15735 406 aa25.75■■□□□ 1.71
LINC00565-201ENST00000562710 RABL6Q3YEC7 729 aaPredicted RBP25.75■■□□□ 1.71
LINC00565-201ENST00000562710 LUZP1Q86V48 1076 aa25.75■■□□□ 1.71
LINC00565-201ENST00000562710 NDUFB9Q9Y6M9 179 aa25.75■■□□□ 1.71
LINC00565-201ENST00000562710 U3KPZ7 1027 aaPredicted RBP25.75■■□□□ 1.71
LINC00565-201ENST00000562710 ZNF609O15014 1411 aa25.75■■□□□ 1.71
LINC00565-201ENST00000562710 AFDNP55196 1824 aaKnown RBP25.74■■□□□ 1.71
LINC00565-201ENST00000562710 CLSTN2Q9H4D0 955 aa25.74■■□□□ 1.71
LINC00565-201ENST00000562710 USP16Q9Y5T5 823 aa25.74■■□□□ 1.71
LINC00565-201ENST00000562710 ZC3H6P61129 1189 aaKnown RBP25.73■■□□□ 1.71
LINC00565-201ENST00000562710 ANO6Q4KMQ2 910 aa25.73■■□□□ 1.71
LINC00565-201ENST00000562710 CCDC129Q6ZRS4 1044 aa25.73■■□□□ 1.71
LINC00565-201ENST00000562710 Q6ZUG5 572 aa25.73■■□□□ 1.71
LINC00565-201ENST00000562710 UBE3BQ7Z3V4 1068 aa25.73■■□□□ 1.71
LINC00565-201ENST00000562710 BRF1Q92994 677 aa25.72■■□□□ 1.71
LINC00565-201ENST00000562710 PGBD1Q96JS3 809 aa25.72■■□□□ 1.71
LINC00565-201ENST00000562710 DNAJC2Q99543 621 aaKnown RBP25.72■■□□□ 1.71
LINC00565-201ENST00000562710 CBX8Q9HC52 389 aa25.72■■□□□ 1.71
LINC00565-201ENST00000562710 CYP21A2P08686 494 aa25.72■■□□□ 1.71
LINC00565-201ENST00000562710 SNRPA1P09661 255 aaKnown RBP25.72■■□□□ 1.71
LINC00565-201ENST00000562710 RESTQ13127 1097 aa25.72■■□□□ 1.71
LINC00565-201ENST00000562710 MCMDC2Q4G0Z9 681 aa25.72■■□□□ 1.71
LINC00565-201ENST00000562710 SEC62Q99442 399 aaKnown RBP25.72■■□□□ 1.71
LINC00565-201ENST00000562710 HAUS7Q99871 368 aa25.72■■□□□ 1.71
LINC00565-201ENST00000562710 DBNDD2Q9BQY9 259 aa25.72■■□□□ 1.71
LINC00565-201ENST00000562710 NLRP2Q9NX02 1062 aa25.72■■□□□ 1.71
LINC00565-201ENST00000562710 CHGBP05060 677 aa25.71■■□□□ 1.71
LINC00565-201ENST00000562710 TATP17735 454 aaPredicted RBP25.71■■□□□ 1.71
LINC00565-201ENST00000562710 NR1I2O75469 434 aa25.71■■□□□ 1.71
LINC00565-201ENST00000562710 PIP4K2AP48426 406 aaPredicted RBP25.71■■□□□ 1.71
LINC00565-201ENST00000562710 HSP90B1P14625 803 aaKnown RBP25.7■■□□□ 1.71
LINC00565-201ENST00000562710 BICD2Q8TD16 824 aa25.7■■□□□ 1.7
LINC00565-201ENST00000562710 TTC5Q8N0Z6 440 aa25.69■■□□□ 1.7
LINC00565-201ENST00000562710 ZSCAN16Q9H4T2 348 aaPredicted RBP25.69■■□□□ 1.7
LINC00565-201ENST00000562710 H3BQV1 296 aa25.69■■□□□ 1.7
LINC00565-201ENST00000562710 IFFO2Q5TF58 517 aa25.69■■□□□ 1.7
LINC00565-201ENST00000562710 IFNL2Q8IZJ0 200 aa25.69■■□□□ 1.7
LINC00565-201ENST00000562710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.69■■□□□ 1.7
LINC00565-201ENST00000562710 ARFGEF2Q9Y6D5 1785 aa25.68■■□□□ 1.7
LINC00565-201ENST00000562710 A0A087WZG4 1122 aa25.68■■□□□ 1.7
LINC00565-201ENST00000562710 DDX46Q7L014 1031 aaKnown RBP25.68■■□□□ 1.7
LINC00565-201ENST00000562710 PTGS1P23219 599 aa25.68■■□□□ 1.7
LINC00565-201ENST00000562710 TSC1Q92574 1164 aa25.68■■□□□ 1.7
LINC00565-201ENST00000562710 DDX11Q96FC9 970 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms