RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 PPP1R12BO60237 982 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 IARSP41252 1262 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 CAPZA3Q96KX2 299 aa11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 MARCKSP29966 332 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 CCDC96Q2M329 555 aa11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 SPTY2D1Q68D10 685 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 LARP1Q6PKG0 1096 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 FEZ1Q99689 392 aa11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 SLC26A6Q9BXS9 759 aa11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 AKAP2Q9Y2D5 859 aa11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 MRPS27Q92552 414 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 LZTFL1Q9NQ48 299 aa11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 SNRKQ9NRH2 765 aa11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 RASSF4Q9H2L5 321 aa11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 SEC63Q9UGP8 760 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-202ENST00000561623 HSPA2P54652 639 aa11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 CKAP4Q07065 602 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 CTCFLQ8NI51 663 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 HYPKQ9NX55 129 aa11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 METAP2P50579 478 aaKnown RBP eCLIP11.69□□□□□ -0.541e-6■□□□□ 10.5
GTF3C1-202ENST00000561623 CCDC40Q4G0X9 1142 aa11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 CTAGE9A4FU28 777 aa11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 FGFR1OPO95684 399 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 TMEM67Q5HYA8 995 aa11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 RRAGBQ5VZM2 374 aa11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 MSL1Q68DK7 614 aa11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 RBM8AQ9Y5S9 174 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 IFNKQ9P0W0 207 aa11.69□□□□□ -0.54
GTF3C1-202ENST00000561623 GRIN2BQ13224 1484 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 CCDC194A0A1B0GVG4 234 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 TRIM21P19474 475 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 MAP3K2Q9Y2U5 619 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 JARID2Q92833 1246 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 TRIM47Q96LD4 638 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 IDEP14735 1019 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 RHPN1Q8TCX5 695 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 SNAPC4Q5SXM2 1469 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 ZEB2O60315 1214 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 AK2P54819 239 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 EHBP1Q8NDI1 1231 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 AKR1B10O60218 316 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 CETN2P41208 172 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 Q6ZUG5 572 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 RPGRQ92834 1020 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 HMG20BQ9P0W2 317 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 SERPINA10Q9UK55 444 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 RPRD2Q5VT52 1461 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 RTL1A6NKG5 1358 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 CAPN15O75808 1086 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 FBLN1P23142 703 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 TCERG1LQ5VWI1 586 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 MPRIPQ6WCQ1 1025 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 TSC1Q92574 1164 aa11.68□□□□□ -0.54
GTF3C1-202ENST00000561623 KLF18A0A0U1RQI7 1052 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 MAPKBP1O60336 1514 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 EBAG9O00559 213 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 IGHMBP2P38935 993 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.67□□□□□ -0.542e-6■■■□□ 19
GTF3C1-202ENST00000561623 CEP63Q96MT8 703 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 ABCC5O15440 1437 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 MRC2Q9UBG0 1479 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 ZNF569Q5MCW4 686 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 OTUD6BQ8N6M0 293 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 MKNK2Q9HBH9 465 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 ANAPC15P60006 121 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 KANK3Q6NY19 840 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 ADGRF5Q8IZF2 1346 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 KAT6BQ8WYB5 2073 aa11.67□□□□□ -0.54
GTF3C1-202ENST00000561623 UTP14AQ9BVJ6 771 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 MYRIPQ8NFW9 859 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 OPA1O60313 960 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 CCDC121Q6ZUS5 278 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 KCNG4Q8TDN1 519 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 RPGRIP1LQ68CZ1 1315 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 POTEJP0CG39 1038 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 ANXA1P04083 346 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 CEBPAP49715 358 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 EVCP57679 992 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 PAIP2Q9BPZ3 127 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 GUCA1BQ9UMX6 200 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 ELF2Q15723 593 aa11.66□□□□□ -0.54
GTF3C1-202ENST00000561623 MAP3K12Q12852 859 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 TMEM266Q2M3C6 531 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 CATIPQ7Z7H3 387 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 IQCA1Q86XH1 822 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 ANKRD44Q8N8A2 993 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 NCOA7Q8NI08 942 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 ANKIB1Q9P2G1 1089 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 A0A087WZG4 1122 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 FAM114A1Q8IWE2 563 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 MRPL50Q8N5N7 158 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 TFCP2L1Q9NZI6 479 aa11.65□□□□□ -0.54
GTF3C1-202ENST00000561623 CCDC61Q9Y6R9 512 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms