RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 BEND3Q5T5X7 828 aa25.31■■□□□ 1.64
TSPAN3-210ENST00000561277 CCDC85AQ96PX6 553 aaPredicted RBP25.31■■□□□ 1.64
TSPAN3-210ENST00000561277 RTKN2Q8IZC4 609 aa25.31■■□□□ 1.64
TSPAN3-210ENST00000561277 TIAM2Q8IVF5 1701 aa25.3■■□□□ 1.64
TSPAN3-210ENST00000561277 FKBP4Q02790 459 aaKnown RBP eCLIP25.3■■□□□ 1.64
TSPAN3-210ENST00000561277 TMX4Q9H1E5 349 aaPredicted RBP25.3■■□□□ 1.64
TSPAN3-210ENST00000561277 PTPRCP08575 1304 aa25.29■■□□□ 1.64
TSPAN3-210ENST00000561277 H7C1W4 665 aa25.29■■□□□ 1.64
TSPAN3-210ENST00000561277 SNED1Q8TER0 1413 aa25.29■■□□□ 1.64
TSPAN3-210ENST00000561277 COL4A1P02462 1669 aa25.28■■□□□ 1.64
TSPAN3-210ENST00000561277 BBOX1O75936 387 aa25.28■■□□□ 1.64
TSPAN3-210ENST00000561277 CC2D2BQ6DHV5 1058 aa25.28■■□□□ 1.64
TSPAN3-210ENST00000561277 CELF1Q92879 486 aaKnown RBP25.28■■□□□ 1.64
TSPAN3-210ENST00000561277 ZNF277Q9NRM2 450 aaPredicted RBP25.28■■□□□ 1.64
TSPAN3-210ENST00000561277 ATP6V0A2Q9Y487 856 aa25.28■■□□□ 1.64
TSPAN3-210ENST00000561277 CCDC152Q4G0S7 254 aa25.27■■□□□ 1.64
TSPAN3-210ENST00000561277 GPBP1L1Q9HC44 474 aaPredicted RBP25.27■■□□□ 1.64
TSPAN3-210ENST00000561277 CTSWP56202 376 aa25.27■■□□□ 1.64
TSPAN3-210ENST00000561277 SRCIN1Q9C0H9 1055 aa25.27■■□□□ 1.64
TSPAN3-210ENST00000561277 SEC31BQ9NQW1 1179 aa25.27■■□□□ 1.64
TSPAN3-210ENST00000561277 RARSP54136 660 aaKnown RBP25.26■■□□□ 1.63
TSPAN3-210ENST00000561277 MYH3P11055 1940 aa25.25■■□□□ 1.63
TSPAN3-210ENST00000561277 CASP7P55210 303 aa25.24■■□□□ 1.63
TSPAN3-210ENST00000561277 PSMD1Q99460 953 aa25.24■■□□□ 1.63
TSPAN3-210ENST00000561277 SP8Q8IXZ3 490 aa25.23■■□□□ 1.63
TSPAN3-210ENST00000561277 NOB1Q9ULX3 412 aaKnown RBP25.23■■□□□ 1.63
TSPAN3-210ENST00000561277 DICER1Q9UPY3 1922 aaKnown RBP25.23■■□□□ 1.63
TSPAN3-210ENST00000561277 GRM8O00222 908 aa25.22■■□□□ 1.63
TSPAN3-210ENST00000561277 ALDH1L1O75891 902 aa25.22■■□□□ 1.63
TSPAN3-210ENST00000561277 GRIPAP1Q4V328 841 aa25.22■■□□□ 1.63
TSPAN3-210ENST00000561277 TMC4Q7Z404 712 aa25.22■■□□□ 1.63
TSPAN3-210ENST00000561277 TTLL11Q8NHH1 800 aa25.22■■□□□ 1.63
TSPAN3-210ENST00000561277 C9orf78Q9NZ63 289 aaPredicted RBP25.22■■□□□ 1.63
TSPAN3-210ENST00000561277 ZC3H4Q9UPT8 1303 aaKnown RBP25.22■■□□□ 1.63
TSPAN3-210ENST00000561277 IARSP41252 1262 aaKnown RBP25.22■■□□□ 1.63
TSPAN3-210ENST00000561277 RPS8P62241 208 aaKnown RBP25.22■■□□□ 1.63
TSPAN3-210ENST00000561277 GREM2Q9H772 168 aa25.22■■□□□ 1.63
TSPAN3-210ENST00000561277 LRRC37AA6NMS7 1700 aa25.21■■□□□ 1.63
TSPAN3-210ENST00000561277 DPP8Q6V1X1 898 aaPredicted RBP25.21■■□□□ 1.63
TSPAN3-210ENST00000561277 MPNDQ8N594 471 aa25.2■■□□□ 1.62
TSPAN3-210ENST00000561277 PLA2G12BQ9BX93 195 aa25.2■■□□□ 1.62
TSPAN3-210ENST00000561277 KIF16BQ96L93 1317 aa25.19■■□□□ 1.62
TSPAN3-210ENST00000561277 BRPF1P55201 1214 aaPredicted RBP25.18■■□□□ 1.62
TSPAN3-210ENST00000561277 ANKRD18AQ8IVF6 992 aa25.18■■□□□ 1.62
TSPAN3-210ENST00000561277 KDM2BQ8NHM5 1336 aa25.18■■□□□ 1.62
TSPAN3-210ENST00000561277 FAM161AQ3B820 660 aa25.18■■□□□ 1.62
TSPAN3-210ENST00000561277 CDC5LQ99459 802 aaKnown RBP25.18■■□□□ 1.62
TSPAN3-210ENST00000561277 NMRK2Q9NPI5 230 aa25.18■■□□□ 1.62
TSPAN3-210ENST00000561277 BCAR3O75815 825 aa25.17■■□□□ 1.62
TSPAN3-210ENST00000561277 API5Q9BZZ5 524 aaKnown RBP25.17■■□□□ 1.62
TSPAN3-210ENST00000561277 NSFL1CQ9UNZ2 370 aaKnown RBP25.17■■□□□ 1.62
TSPAN3-210ENST00000561277 RTL9Q8NET4 1388 aa25.16■■□□□ 1.62
TSPAN3-210ENST00000561277 SPEF2Q9C093 1822 aa25.16■■□□□ 1.62
TSPAN3-210ENST00000561277 LARGE2Q8N3Y3 721 aa25.16■■□□□ 1.62
TSPAN3-210ENST00000561277 CHMP3Q9Y3E7 222 aa25.16■■□□□ 1.62
TSPAN3-210ENST00000561277 DUOX1Q9NRD9 1551 aa25.16■■□□□ 1.62
TSPAN3-210ENST00000561277 COL4A5P29400 1685 aa25.15■■□□□ 1.62
TSPAN3-210ENST00000561277 GLTPD2A6NH11 291 aa25.15■■□□□ 1.62
TSPAN3-210ENST00000561277 PPIP5K2O43314 1243 aa25.15■■□□□ 1.62
TSPAN3-210ENST00000561277 NBPF7P0C2Y1 421 aaPredicted RBP25.15■■□□□ 1.62
TSPAN3-210ENST00000561277 FOXO4P98177 505 aa25.15■■□□□ 1.62
TSPAN3-210ENST00000561277 AOC3Q16853 763 aa25.15■■□□□ 1.62
TSPAN3-210ENST00000561277 SUPT20HQ8NEM7 779 aa25.15■■□□□ 1.62
TSPAN3-210ENST00000561277 CSF1RP07333 972 aa25.14■■□□□ 1.62
TSPAN3-210ENST00000561277 ITGA6P23229 1130 aa25.14■■□□□ 1.62
TSPAN3-210ENST00000561277 GPSM2P81274 684 aa25.14■■□□□ 1.62
TSPAN3-210ENST00000561277 EPHA10Q5JZY3 1008 aa25.14■■□□□ 1.62
TSPAN3-210ENST00000561277 DPY19L2Q6NUT2 758 aa25.14■■□□□ 1.62
TSPAN3-210ENST00000561277 JDP2Q8WYK2 163 aa25.14■■□□□ 1.62
TSPAN3-210ENST00000561277 FRAT1Q92837 279 aaPredicted RBP25.14■■□□□ 1.62
TSPAN3-210ENST00000561277 RTFDC1Q9BY42 306 aaPredicted RBP25.14■■□□□ 1.62
TSPAN3-210ENST00000561277 SUCLG2Q96I99 432 aa25.14■■□□□ 1.61
TSPAN3-210ENST00000561277 LMBR1LQ6UX01 489 aa25.13■■□□□ 1.61
TSPAN3-210ENST00000561277 ZNF541Q9H0D2 1346 aa25.12■■□□□ 1.61
TSPAN3-210ENST00000561277 CCT4P50991 539 aaKnown RBP25.12■■□□□ 1.61
TSPAN3-210ENST00000561277 UTYO14607 1347 aa25.11■■□□□ 1.61
TSPAN3-210ENST00000561277 C6orf229H3BNL8 230 aa25.11■■□□□ 1.61
TSPAN3-210ENST00000561277 KIF3CO14782 793 aa25.11■■□□□ 1.61
TSPAN3-210ENST00000561277 IGHMBP2P38935 993 aaKnown RBP25.11■■□□□ 1.61
TSPAN3-210ENST00000561277 RRAGCQ9HB90 399 aa25.11■■□□□ 1.61
TSPAN3-210ENST00000561277 ANKIB1Q9P2G1 1089 aa25.11■■□□□ 1.61
TSPAN3-210ENST00000561277 LTBP1Q14766 1721 aa25.11■■□□□ 1.61
TSPAN3-210ENST00000561277 ANKRD18BA2A2Z9 1011 aa25.1■■□□□ 1.61
TSPAN3-210ENST00000561277 DDNO94850 711 aaPredicted RBP25.1■■□□□ 1.61
TSPAN3-210ENST00000561277 NIM1KQ8IY84 436 aa25.1■■□□□ 1.61
TSPAN3-210ENST00000561277 ARHGAP45Q92619 1136 aa25.1■■□□□ 1.61
TSPAN3-210ENST00000561277 IPO8O15397 1037 aaKnown RBP25.1■■□□□ 1.61
TSPAN3-210ENST00000561277 IFIT5Q13325 482 aaKnown RBP25.1■■□□□ 1.61
TSPAN3-210ENST00000561277 KAZALD1Q96I82 304 aa25.1■■□□□ 1.61
TSPAN3-210ENST00000561277 USP44Q9H0E7 712 aa25.1■■□□□ 1.61
TSPAN3-210ENST00000561277 BSDC1Q9NW68 430 aaPredicted RBP25.1■■□□□ 1.61
TSPAN3-210ENST00000561277 POLLQ9UGP5 575 aa25.1■■□□□ 1.61
TSPAN3-210ENST00000561277 FZD9O00144 591 aa25.09■■□□□ 1.61
TSPAN3-210ENST00000561277 KIAA2012Q0VF49 1180 aa25.09■■□□□ 1.61
TSPAN3-210ENST00000561277 GPR101Q96P66 508 aaPredicted RBP25.09■■□□□ 1.61
TSPAN3-210ENST00000561277 VPS33BQ9H267 617 aa25.09■■□□□ 1.61
TSPAN3-210ENST00000561277 UFL1O94874 794 aa25.08■■□□□ 1.61
TSPAN3-210ENST00000561277 TRIM27P14373 513 aa25.08■■□□□ 1.61
TSPAN3-210ENST00000561277 TBC1D16Q8TBP0 767 aa25.08■■□□□ 1.61
TSPAN3-210ENST00000561277 MPHOSPH8Q99549 860 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 888 ms