RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 SRGAP3O43295 1099 aa17.01■□□□□ 0.31
HMBOX1-213ENST00000560269 ZBTB7AO95365 584 aa17.01■□□□□ 0.31
HMBOX1-213ENST00000560269 IGHDP01880 384 aa17.01■□□□□ 0.31
HMBOX1-213ENST00000560269 CCDC24Q8N4L8 307 aa17.01■□□□□ 0.31
HMBOX1-213ENST00000560269 RTL9Q8NET4 1388 aa17.01■□□□□ 0.31
HMBOX1-213ENST00000560269 RFX5P48382 616 aaPredicted RBP17■□□□□ 0.31
HMBOX1-213ENST00000560269 B4GALNT3Q6L9W6 998 aa17■□□□□ 0.31
HMBOX1-213ENST00000560269 C3orf67Q6ZVT6 689 aa17■□□□□ 0.31
HMBOX1-213ENST00000560269 NLRP3Q96P20 1036 aa17■□□□□ 0.31
HMBOX1-213ENST00000560269 KLRG2A4D1S0 409 aaPredicted RBP16.99■□□□□ 0.31
HMBOX1-213ENST00000560269 CCDC152Q4G0S7 254 aa16.99■□□□□ 0.31
HMBOX1-213ENST00000560269 BRIP1Q9BX63 1249 aa16.99■□□□□ 0.31
HMBOX1-213ENST00000560269 GREM2Q9H772 168 aa16.99■□□□□ 0.31
HMBOX1-213ENST00000560269 ATF5Q9Y2D1 282 aaPredicted RBP16.99■□□□□ 0.31
HMBOX1-213ENST00000560269 KDM2BQ8NHM5 1336 aa16.98■□□□□ 0.31
HMBOX1-213ENST00000560269 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
HMBOX1-213ENST00000560269 SGIP1Q9BQI5 828 aa16.98■□□□□ 0.31
HMBOX1-213ENST00000560269 DCTPP1Q9H773 170 aa16.98■□□□□ 0.31
HMBOX1-213ENST00000560269 CHMP3Q9Y3E7 222 aa16.98■□□□□ 0.31
HMBOX1-213ENST00000560269 KIF13BQ9NQT8 1826 aa16.98■□□□□ 0.31
HMBOX1-213ENST00000560269 C10orf71Q711Q0 1435 aa16.97■□□□□ 0.31
HMBOX1-213ENST00000560269 POLD1P28340 1107 aa16.97■□□□□ 0.31
HMBOX1-213ENST00000560269 PTPN12Q05209 780 aaKnown RBP16.97■□□□□ 0.31
HMBOX1-213ENST00000560269 CCDC57Q2TAC2 916 aa16.97■□□□□ 0.31
HMBOX1-213ENST00000560269 CRY2Q49AN0 593 aa16.97■□□□□ 0.31
HMBOX1-213ENST00000560269 COPRSQ9NQ92 184 aa16.97■□□□□ 0.31
HMBOX1-213ENST00000560269 NOP58Q9Y2X3 529 aaKnown RBP16.97■□□□□ 0.31
HMBOX1-213ENST00000560269 ANKRD18BA2A2Z9 1011 aa16.96■□□□□ 0.31
HMBOX1-213ENST00000560269 ITGA6P23229 1130 aa16.96■□□□□ 0.31
HMBOX1-213ENST00000560269 IFIT5Q13325 482 aaKnown RBP16.96■□□□□ 0.31
HMBOX1-213ENST00000560269 CENPQQ7L2Z9 268 aaPredicted RBP16.96■□□□□ 0.31
HMBOX1-213ENST00000560269 SMC5Q8IY18 1101 aa16.96■□□□□ 0.31
HMBOX1-213ENST00000560269 GCC1Q96CN9 775 aa16.96■□□□□ 0.31
HMBOX1-213ENST00000560269 CCDC85AQ96PX6 553 aaPredicted RBP16.96■□□□□ 0.31
HMBOX1-213ENST00000560269 LRP5O75197 1615 aa16.96■□□□□ 0.3
HMBOX1-213ENST00000560269 PDE6BP35913 854 aa16.95■□□□□ 0.3
HMBOX1-213ENST00000560269 PA2G4Q9UQ80 394 aaKnown RBP16.95■□□□□ 0.3
HMBOX1-213ENST00000560269 COL11A2P13942 1736 aaPredicted RBP16.95■□□□□ 0.3
HMBOX1-213ENST00000560269 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
HMBOX1-213ENST00000560269 PTGER2P43116 358 aa16.94■□□□□ 0.3
HMBOX1-213ENST00000560269 SEC31BQ9NQW1 1179 aa16.94■□□□□ 0.3
HMBOX1-213ENST00000560269 FBXO3Q9UK99 471 aa16.94■□□□□ 0.3
HMBOX1-213ENST00000560269 PDZRN3Q9UPQ7 1066 aa16.94■□□□□ 0.3
HMBOX1-213ENST00000560269 COL4A1P02462 1669 aa16.94■□□□□ 0.3
HMBOX1-213ENST00000560269 HOXA10P31260 410 aaPredicted RBP16.93■□□□□ 0.3
HMBOX1-213ENST00000560269 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
HMBOX1-213ENST00000560269 KLHDC4Q8TBB5 520 aa16.93■□□□□ 0.3
HMBOX1-213ENST00000560269 ZNF594Q96JF6 807 aaPredicted RBP16.93■□□□□ 0.3
HMBOX1-213ENST00000560269 CDC5LQ99459 802 aaKnown RBP16.93■□□□□ 0.3
HMBOX1-213ENST00000560269 EXOC6BQ9Y2D4 811 aa16.93■□□□□ 0.3
HMBOX1-213ENST00000560269 TAF1P21675 1872 aa16.93■□□□□ 0.3
HMBOX1-213ENST00000560269 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
HMBOX1-213ENST00000560269 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
HMBOX1-213ENST00000560269 CIAO1O76071 339 aa16.92■□□□□ 0.3
HMBOX1-213ENST00000560269 SRGNP10124 158 aa16.92■□□□□ 0.3
HMBOX1-213ENST00000560269 DDX46Q7L014 1031 aaKnown RBP16.92■□□□□ 0.3
HMBOX1-213ENST00000560269 SPON1Q9HCB6 807 aa16.92■□□□□ 0.3
HMBOX1-213ENST00000560269 KIAA1551Q9HCM1 1747 aa16.91■□□□□ 0.3
HMBOX1-213ENST00000560269 EYA2O00167 538 aa16.91■□□□□ 0.3
HMBOX1-213ENST00000560269 RAB11FIP3O75154 756 aa16.91■□□□□ 0.3
HMBOX1-213ENST00000560269 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
HMBOX1-213ENST00000560269 TAF7LQ5H9L4 462 aa16.91■□□□□ 0.3
HMBOX1-213ENST00000560269 RPGRQ92834 1020 aaKnown RBP16.91■□□□□ 0.3
HMBOX1-213ENST00000560269 RBM17Q96I25 401 aaKnown RBP16.91■□□□□ 0.3
HMBOX1-213ENST00000560269 CRAMP1Q96RY5 1269 aa16.91■□□□□ 0.3
HMBOX1-213ENST00000560269 NPR1P16066 1061 aa16.9■□□□□ 0.3
HMBOX1-213ENST00000560269 GRAPQ13588 217 aa16.9■□□□□ 0.3
HMBOX1-213ENST00000560269 LDHAL6AQ6ZMR3 332 aa16.9■□□□□ 0.3
HMBOX1-213ENST00000560269 ATG9AQ7Z3C6 839 aa16.9■□□□□ 0.3
HMBOX1-213ENST00000560269 ERC1Q8IUD2 1116 aa16.9■□□□□ 0.3
HMBOX1-213ENST00000560269 ANKRD18AQ8IVF6 992 aa16.9■□□□□ 0.3
HMBOX1-213ENST00000560269 GRAPLQ8TC17 118 aaPredicted RBP16.9■□□□□ 0.3
HMBOX1-213ENST00000560269 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
HMBOX1-213ENST00000560269 MASTLQ96GX5 879 aa16.9■□□□□ 0.3
HMBOX1-213ENST00000560269 SIL1Q9H173 461 aa16.9■□□□□ 0.3
HMBOX1-213ENST00000560269 H0YIN7 160 aa16.89■□□□□ 0.29
HMBOX1-213ENST00000560269 IGHMBP2P38935 993 aaKnown RBP16.89■□□□□ 0.29
HMBOX1-213ENST00000560269 IL15P40933 162 aaPredicted RBP16.89■□□□□ 0.29
HMBOX1-213ENST00000560269 RPS8P62241 208 aaKnown RBP16.89■□□□□ 0.29
HMBOX1-213ENST00000560269 NUCB1Q02818 461 aa16.89■□□□□ 0.29
HMBOX1-213ENST00000560269 LRRC24Q50LG9 513 aa16.89■□□□□ 0.29
HMBOX1-213ENST00000560269 C2CD5Q86YS7 1000 aa16.89■□□□□ 0.29
HMBOX1-213ENST00000560269 KIF1BPQ96EK5 621 aa16.89■□□□□ 0.29
HMBOX1-213ENST00000560269 PUS3Q9BZE2 481 aaKnown RBP16.89■□□□□ 0.29
HMBOX1-213ENST00000560269 RIPOR2Q9Y4F9 1068 aa16.89■□□□□ 0.29
HMBOX1-213ENST00000560269 A0A1B0GUL6 1792 aa16.88■□□□□ 0.29
HMBOX1-213ENST00000560269 SASH1O94885 1247 aa16.88■□□□□ 0.29
HMBOX1-213ENST00000560269 OS9Q13438 667 aaPredicted RBP16.88■□□□□ 0.29
HMBOX1-213ENST00000560269 STYK1Q6J9G0 422 aa16.88■□□□□ 0.29
HMBOX1-213ENST00000560269 MPHOSPH8Q99549 860 aa16.88■□□□□ 0.29
HMBOX1-213ENST00000560269 LRRCC1Q9C099 1032 aa16.88■□□□□ 0.29
HMBOX1-213ENST00000560269 BSDC1Q9NW68 430 aaPredicted RBP16.88■□□□□ 0.29
HMBOX1-213ENST00000560269 ALDH1B1P30837 517 aa16.87■□□□□ 0.29
HMBOX1-213ENST00000560269 TGFB2P61812 414 aa16.87■□□□□ 0.29
HMBOX1-213ENST00000560269 ANKRD45Q5TZF3 282 aa16.87■□□□□ 0.29
HMBOX1-213ENST00000560269 RHPN1Q8TCX5 695 aa16.87■□□□□ 0.29
HMBOX1-213ENST00000560269 CNNM1Q9NRU3 951 aa16.87■□□□□ 0.29
HMBOX1-213ENST00000560269 CD2APQ9Y5K6 639 aa16.87■□□□□ 0.29
HMBOX1-213ENST00000560269 LRRC37AA6NMS7 1700 aa16.87■□□□□ 0.29
HMBOX1-213ENST00000560269 BBOX1O75936 387 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms