RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ANKRD24Q8TF21 1146 aa15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 EEF2P13639 858 aaKnown RBP15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 ABCF2Q9UG63 623 aa15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 EXOSC9Q06265 439 aaKnown RBP15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 TTF1Q15361 905 aaPredicted RBP15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 PPP1R7Q15435 360 aa15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 CKAP2LQ8IYA6 745 aa15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 CCDC82Q8N4S0 544 aa15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 TBC1D31Q96DN5 1066 aa15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 NKIRAS1Q9NYS0 192 aa15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 INPP1P49441 399 aa15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 GABPB2Q8TAK5 448 aaPredicted RBP15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 ZNF213O14771 459 aa15.72■□□□□ 0.11
CSPG4P12-202ENST00000559989 KRT83P78385 493 aa15.72■□□□□ 0.11
CSPG4P12-202ENST00000559989 N4BP3O15049 544 aa15.72■□□□□ 0.11
CSPG4P12-202ENST00000559989 VCX3AQ9NNX9 186 aa15.72■□□□□ 0.11
CSPG4P12-202ENST00000559989 FCHSD2O94868 740 aa15.72■□□□□ 0.11
CSPG4P12-202ENST00000559989 CCDC62Q6P9F0 684 aa15.72■□□□□ 0.11
CSPG4P12-202ENST00000559989 CLUL1Q15846 466 aa15.72■□□□□ 0.11
CSPG4P12-202ENST00000559989 METTL24Q5JXM2 366 aa15.72■□□□□ 0.11
CSPG4P12-202ENST00000559989 PPP1R12CQ9BZL4 782 aa15.72■□□□□ 0.11
CSPG4P12-202ENST00000559989 TRIM35Q9UPQ4 493 aa15.72■□□□□ 0.11
CSPG4P12-202ENST00000559989 ZNF652Q9Y2D9 606 aa15.72■□□□□ 0.11
CSPG4P12-202ENST00000559989 BCAR3O75815 825 aa15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 VIMP08670 466 aaKnown RBP15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 NLRP6P59044 892 aa15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 GPR161Q8N6U8 529 aaKnown RBP15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 IMPG2Q9BZV3 1241 aa15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 NUTM2GQ5VZR2 741 aa15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 HSPA1LP34931 641 aa15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 ERMNQ8TAM6 284 aa15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 HAUS7Q99871 368 aa15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 GIPC1O14908 333 aa15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 GUCY1B3Q02153 619 aa15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 RANBP6O60518 1105 aaKnown RBP15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 POTEDQ86YR6 584 aa15.71■□□□□ 0.11
CSPG4P12-202ENST00000559989 UBA7P41226 1012 aa15.71■□□□□ 0.1
CSPG4P12-202ENST00000559989 TTLL12Q14166 644 aaPredicted RBP15.71■□□□□ 0.1
CSPG4P12-202ENST00000559989 CCDC117Q8IWD4 279 aaPredicted RBP15.71■□□□□ 0.1
CSPG4P12-202ENST00000559989 IRX4P78413 519 aa15.71■□□□□ 0.1
CSPG4P12-202ENST00000559989 SMIM23A6NLE4 172 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 FERMT3Q86UX7 667 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 TUBBP07437 444 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 HAUS8Q9BT25 410 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 MAP3K12Q12852 859 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 ZNF365Q70YC5 407 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 HDXQ7Z353 690 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 UBLCP1Q8WVY7 318 aaPredicted RBP15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 KRT86O43790 486 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 KIF1BPQ96EK5 621 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 STAC3Q96MF2 364 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 CETN3O15182 167 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 VAV2P52735 878 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 MAP3K7CLP57077 242 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 PLCB3Q01970 1234 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 RUFY3Q7L099 469 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 CCDC65Q8IXS2 484 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 ARHGEF2Q92974 986 aaKnown RBP15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 BCAP29Q9UHQ4 241 aa15.7■□□□□ 0.1
CSPG4P12-202ENST00000559989 IDEP14735 1019 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 MTHFSP49914 203 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 CCDC102BQ68D86 513 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 CSRNP2Q9H175 543 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 GLRX3O76003 335 aaKnown RBP15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 ATP6V1E1P36543 226 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 ATF7IPQ6VMQ6 1270 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 NCBP1Q09161 790 aaKnown RBP15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 A6NNZ2 444 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 BIN1O00499 593 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 UBE2HP62256 183 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 TUBB8Q3ZCM7 444 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 CCDC25Q86WR0 208 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 TCP11L2Q8N4U5 519 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 GGNBP2Q9H3C7 697 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 PRKAR2BP31323 418 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 TERF1P54274 439 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 SRGAP1Q7Z6B7 1085 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 FMNL3Q8IVF7 1028 aa15.69■□□□□ 0.1
CSPG4P12-202ENST00000559989 BTBD11A6QL63 1104 aa15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 IFIT3O14879 490 aaKnown RBP15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 CALCOCO2Q13137 446 aa15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 GSDMBQ8TAX9 411 aa15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 GIGYF1O75420 1035 aaPredicted RBP15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 RNF10Q8N5U6 811 aaKnown RBP15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 MCUR1Q96AQ8 359 aa15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 RNF216Q9NWF9 866 aaPredicted RBP15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 STAT6P42226 847 aa15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 ANKFY1Q9P2R3 1169 aa15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 PSPC1Q8WXF1 523 aaKnown RBP15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 ITIH3Q06033 890 aa15.68■□□□□ 0.1
CSPG4P12-202ENST00000559989 IFIT1P09914 478 aaKnown RBP15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 ZNF165P49910 485 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 CCDC26Q8TAB7 109 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 DNAJC8O75937 253 aaPredicted RBP15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 FAM13AO94988 1023 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 WHAMMP3Q1A5X7 153 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 LIMCH1Q9UPQ0 1083 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 RAD54L2Q9Y4B4 1467 aa15.67■□□□□ 0.1
CSPG4P12-202ENST00000559989 GJC1P36383 396 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms