RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 RFC4P35249 363 aa17.67■□□□□ 0.42
RABGGTA-209ENST00000559551 CTSWP56202 376 aa17.67■□□□□ 0.42
RABGGTA-209ENST00000559551 CAMKK2Q96RR4 588 aa17.67■□□□□ 0.42
RABGGTA-209ENST00000559551 PDE8AO60658 829 aa17.66■□□□□ 0.42
RABGGTA-209ENST00000559551 SSFA2P28290 1259 aa17.66■□□□□ 0.42
RABGGTA-209ENST00000559551 TSHZ3Q63HK5 1081 aa17.66■□□□□ 0.42
RABGGTA-209ENST00000559551 ATG9AQ7Z3C6 839 aa17.66■□□□□ 0.42
RABGGTA-209ENST00000559551 GREM2Q9H772 168 aa17.66■□□□□ 0.42
RABGGTA-209ENST00000559551 EN1Q05925 392 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-209ENST00000559551 EZH2Q15910 746 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-209ENST00000559551 HSP90AB4PQ58FF6 505 aa17.65■□□□□ 0.42
RABGGTA-209ENST00000559551 TNRC6CQ9HCJ0 1690 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-209ENST00000559551 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
RABGGTA-209ENST00000559551 GYS1P13807 737 aa17.65■□□□□ 0.42
RABGGTA-209ENST00000559551 PDE1AP54750 535 aa17.65■□□□□ 0.42
RABGGTA-209ENST00000559551 ERFEQ4G0M1 354 aa17.65■□□□□ 0.42
RABGGTA-209ENST00000559551 C3orf67Q6ZVT6 689 aa17.65■□□□□ 0.42
RABGGTA-209ENST00000559551 PUS3Q9BZE2 481 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-209ENST00000559551 LRP5O75197 1615 aa17.65■□□□□ 0.42
RABGGTA-209ENST00000559551 G3BP1Q13283 466 aaKnown RBP eCLIP17.64■□□□□ 0.41
RABGGTA-209ENST00000559551 OS9Q13438 667 aaPredicted RBP17.64■□□□□ 0.41
RABGGTA-209ENST00000559551 LRRC24Q50LG9 513 aa17.64■□□□□ 0.41
RABGGTA-209ENST00000559551 OSBPL3Q9H4L5 887 aa17.64■□□□□ 0.41
RABGGTA-209ENST00000559551 NFIXQ14938 502 aa17.63■□□□□ 0.41
RABGGTA-209ENST00000559551 BMP2KLQ5H9B9 411 aa17.63■□□□□ 0.41
RABGGTA-209ENST00000559551 TTC22Q5TAA0 569 aa17.63■□□□□ 0.41
RABGGTA-209ENST00000559551 EAF2Q96CJ1 260 aaPredicted RBP17.63■□□□□ 0.41
RABGGTA-209ENST00000559551 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
RABGGTA-209ENST00000559551 ZBTB47Q9UFB7 747 aaPredicted RBP17.63■□□□□ 0.41
RABGGTA-209ENST00000559551 AK9Q5TCS8 1911 aa17.63■□□□□ 0.41
RABGGTA-209ENST00000559551 QSER1Q2KHR3 1735 aa17.63■□□□□ 0.41
RABGGTA-209ENST00000559551 COL23A1Q86Y22 540 aaPredicted RBP17.62■□□□□ 0.41
RABGGTA-209ENST00000559551 STAP2Q9UGK3 403 aa17.62■□□□□ 0.41
RABGGTA-209ENST00000559551 MX1P20591 662 aa17.62■□□□□ 0.41
RABGGTA-209ENST00000559551 ITGA6P23229 1130 aa17.62■□□□□ 0.41
RABGGTA-209ENST00000559551 TFCP2Q12800 502 aa17.62■□□□□ 0.41
RABGGTA-209ENST00000559551 ERC1Q8IUD2 1116 aa17.62■□□□□ 0.41
RABGGTA-209ENST00000559551 SETDB2Q96T68 719 aa17.62■□□□□ 0.41
RABGGTA-209ENST00000559551 A0A1B0GUL6 1792 aa17.62■□□□□ 0.41
RABGGTA-209ENST00000559551 SRCAPQ6ZRS2 3230 aa17.61■□□□□ 0.41
RABGGTA-209ENST00000559551 EYA2O00167 538 aa17.61■□□□□ 0.41
RABGGTA-209ENST00000559551 DEFB132Q7Z7B7 95 aa17.61■□□□□ 0.41
RABGGTA-209ENST00000559551 CCDC24Q8N4L8 307 aa17.61■□□□□ 0.41
RABGGTA-209ENST00000559551 TLR7Q9NYK1 1049 aaKnown RBP17.61■□□□□ 0.41
RABGGTA-209ENST00000559551 SEC24BO95487 1268 aa17.6■□□□□ 0.41
RABGGTA-209ENST00000559551 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
RABGGTA-209ENST00000559551 SLC10A5Q5PT55 438 aa17.6■□□□□ 0.41
RABGGTA-209ENST00000559551 SEC31BQ9NQW1 1179 aa17.6■□□□□ 0.41
RABGGTA-209ENST00000559551 TFCP2L1Q9NZI6 479 aa17.6■□□□□ 0.41
RABGGTA-209ENST00000559551 PNPLA7Q6ZV29 1317 aa17.6■□□□□ 0.41
RABGGTA-209ENST00000559551 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
RABGGTA-209ENST00000559551 TM4SF1P30408 202 aa17.6■□□□□ 0.41
RABGGTA-209ENST00000559551 IFIT5Q13325 482 aaKnown RBP17.59■□□□□ 0.41
RABGGTA-209ENST00000559551 PI4K2BQ8TCG2 481 aa17.59■□□□□ 0.41
RABGGTA-209ENST00000559551 CIAO1O76071 339 aa17.59■□□□□ 0.41
RABGGTA-209ENST00000559551 NBPF5PQ86XG9 351 aaPredicted RBP17.59■□□□□ 0.41
RABGGTA-209ENST00000559551 CLASRPQ8N2M8 674 aaKnown RBP17.59■□□□□ 0.41
RABGGTA-209ENST00000559551 CCDC8Q9H0W5 538 aaPredicted RBP17.59■□□□□ 0.41
RABGGTA-209ENST00000559551 NRXN2Q9P2S2 1712 aa17.59■□□□□ 0.41
RABGGTA-209ENST00000559551 CARMIL3Q8ND23 1372 aa17.58■□□□□ 0.41
RABGGTA-209ENST00000559551 ANKRD31Q8N7Z5 1873 aa17.58■□□□□ 0.41
RABGGTA-209ENST00000559551 DDR1Q08345 913 aa17.58■□□□□ 0.4
RABGGTA-209ENST00000559551 AACSQ86V21 672 aa17.58■□□□□ 0.4
RABGGTA-209ENST00000559551 RTL9Q8NET4 1388 aa17.58■□□□□ 0.4
RABGGTA-209ENST00000559551 TNNI3KQ59H18 835 aa17.57■□□□□ 0.4
RABGGTA-209ENST00000559551 RIPOR2Q9Y4F9 1068 aa17.57■□□□□ 0.4
RABGGTA-209ENST00000559551 FPGT-TNNI3KV9GXZ4 949 aa17.57■□□□□ 0.4
RABGGTA-209ENST00000559551 ANKRD18BA2A2Z9 1011 aa17.57■□□□□ 0.4
RABGGTA-209ENST00000559551 SDSP20132 328 aa17.57■□□□□ 0.4
RABGGTA-209ENST00000559551 IL15P40933 162 aaPredicted RBP17.57■□□□□ 0.4
RABGGTA-209ENST00000559551 SF3B3Q15393 1217 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-209ENST00000559551 NYXQ9GZU5 481 aa17.56■□□□□ 0.4
RABGGTA-209ENST00000559551 DBNLQ9UJU6 430 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-209ENST00000559551 ZNF609O15014 1411 aa17.56■□□□□ 0.4
RABGGTA-209ENST00000559551 PRR5LQ6MZQ0 368 aa17.56■□□□□ 0.4
RABGGTA-209ENST00000559551 TPTE2Q6XPS3 522 aa17.56■□□□□ 0.4
RABGGTA-209ENST00000559551 FBXO3Q9UK99 471 aa17.56■□□□□ 0.4
RABGGTA-209ENST00000559551 AOX1Q06278 1338 aa17.55■□□□□ 0.4
RABGGTA-209ENST00000559551 POLRMTO00411 1230 aaKnown RBP17.54■□□□□ 0.4
RABGGTA-209ENST00000559551 HMGB2P26583 209 aaKnown RBP17.54■□□□□ 0.4
RABGGTA-209ENST00000559551 SLC15A2Q16348 729 aa17.54■□□□□ 0.4
RABGGTA-209ENST00000559551 CCDC152Q4G0S7 254 aa17.54■□□□□ 0.4
RABGGTA-209ENST00000559551 VGLL2Q8N8G2 317 aa17.54■□□□□ 0.4
RABGGTA-209ENST00000559551 IFIT2P09913 472 aaKnown RBP17.54■□□□□ 0.4
RABGGTA-209ENST00000559551 LDHAL6AQ6ZMR3 332 aa17.54■□□□□ 0.4
RABGGTA-209ENST00000559551 DBNDD2Q9BQY9 259 aa17.54■□□□□ 0.4
RABGGTA-209ENST00000559551 ARAP2Q8WZ64 1704 aa17.54■□□□□ 0.4
RABGGTA-209ENST00000559551 TTC41PQ6P2S7 1318 aa17.53■□□□□ 0.4
RABGGTA-209ENST00000559551 SERPINB2P05120 415 aa17.53■□□□□ 0.4
RABGGTA-209ENST00000559551 GTF2E1P29083 439 aaPredicted RBP17.53■□□□□ 0.4
RABGGTA-209ENST00000559551 TIMM10P62072 90 aa17.53■□□□□ 0.4
RABGGTA-209ENST00000559551 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
RABGGTA-209ENST00000559551 GPR108Q9NPR9 543 aa17.53■□□□□ 0.4
RABGGTA-209ENST00000559551 BAG6P46379 1132 aa17.52■□□□□ 0.4
RABGGTA-209ENST00000559551 TBC1D9Q6ZT07 1266 aa17.52■□□□□ 0.4
RABGGTA-209ENST00000559551 ECHDC1Q9NTX5 307 aa17.52■□□□□ 0.4
RABGGTA-209ENST00000559551 MAP4K4O95819 1239 aaPredicted RBP17.52■□□□□ 0.39
RABGGTA-209ENST00000559551 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.39
RABGGTA-209ENST00000559551 AKAP11Q9UKA4 1901 aa17.52■□□□□ 0.39
RABGGTA-209ENST00000559551 HSP90B1P14625 803 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms