RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TCIRG1Q13488 830 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 L1TD1Q5T7N2 865 aaKnown RBP12.7□□□□□ -0.38
TPM1-210ENST00000558264 CAVIN1Q6NZI2 390 aaKnown RBP12.7□□□□□ -0.38
TPM1-210ENST00000558264 KIF6Q6ZMV9 814 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 CLEC17AQ6ZS10 378 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 CCDC83Q8IWF9 413 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 IL17RAQ96F46 866 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 PDRG1Q9NUG6 133 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
TPM1-210ENST00000558264 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 TJP1Q07157 1748 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 COL15A1P39059 1388 aa12.69□□□□□ -0.38
TPM1-210ENST00000558264 GOLIM4O00461 696 aa12.69□□□□□ -0.38
TPM1-210ENST00000558264 EXOC5O00471 708 aa12.69□□□□□ -0.38
TPM1-210ENST00000558264 SLC27A2O14975 620 aa12.69□□□□□ -0.38
TPM1-210ENST00000558264 STARD3NLO95772 234 aa12.69□□□□□ -0.38
TPM1-210ENST00000558264 SKOR2Q2VWA4 1001 aaPredicted RBP12.69□□□□□ -0.38
TPM1-210ENST00000558264 NECAB1Q8N987 351 aa12.69□□□□□ -0.38
TPM1-210ENST00000558264 MAP4K1Q92918 833 aa12.69□□□□□ -0.38
TPM1-210ENST00000558264 ISCA1Q9BUE6 129 aa12.69□□□□□ -0.38
TPM1-210ENST00000558264 NSFL1CQ9UNZ2 370 aaKnown RBP12.69□□□□□ -0.38
TPM1-210ENST00000558264 TBC1D2BQ9UPU7 963 aa12.69□□□□□ -0.38
TPM1-210ENST00000558264 HIP1O00291 1037 aa12.68□□□□□ -0.38
TPM1-210ENST00000558264 EPB41L2O43491 1005 aaKnown RBP12.68□□□□□ -0.38
TPM1-210ENST00000558264 BRD1O95696 1058 aa12.68□□□□□ -0.38
TPM1-210ENST00000558264 ZKSCAN1P17029 563 aaPredicted RBP12.68□□□□□ -0.38
TPM1-210ENST00000558264 PIP4K2BP78356 416 aa12.68□□□□□ -0.38
TPM1-210ENST00000558264 LIMCH1Q9UPQ0 1083 aa12.68□□□□□ -0.38
TPM1-210ENST00000558264 CYP46A1Q9Y6A2 500 aa12.68□□□□□ -0.38
TPM1-210ENST00000558264 FAM177BA6PVY3 158 aa12.68□□□□□ -0.38
TPM1-210ENST00000558264 EYA2O00167 538 aa12.68□□□□□ -0.38
TPM1-210ENST00000558264 INTS4Q96HW7 963 aaKnown RBP12.68□□□□□ -0.38
TPM1-210ENST00000558264 MED23Q9ULK4 1368 aa12.68□□□□□ -0.38
TPM1-210ENST00000558264 ZNF609O15014 1411 aa12.67□□□□□ -0.38
TPM1-210ENST00000558264 A0A1B0GUL7 405 aa12.67□□□□□ -0.38
TPM1-210ENST00000558264 CCDC57Q2TAC2 916 aa12.67□□□□□ -0.38
TPM1-210ENST00000558264 GPT2Q8TD30 523 aa12.67□□□□□ -0.38
TPM1-210ENST00000558264 GRPEL1Q9HAV7 217 aa12.67□□□□□ -0.38
TPM1-210ENST00000558264 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
TPM1-210ENST00000558264 ADORA1P30542 326 aa12.67□□□□□ -0.38
TPM1-210ENST00000558264 KLHL40Q2TBA0 621 aa12.67□□□□□ -0.38
TPM1-210ENST00000558264 HAUS7Q99871 368 aa12.67□□□□□ -0.38
TPM1-210ENST00000558264 ZSWIM6Q9HCJ5 1215 aa12.67□□□□□ -0.38
TPM1-210ENST00000558264 DISP2A7MBM2 1401 aa12.67□□□□□ -0.38
TPM1-210ENST00000558264 TAF5LO75529 589 aa12.66□□□□□ -0.38
TPM1-210ENST00000558264 CYP19A1P11511 503 aaPredicted RBP12.66□□□□□ -0.38
TPM1-210ENST00000558264 IL15P40933 162 aaPredicted RBP12.66□□□□□ -0.38
TPM1-210ENST00000558264 TAF7LQ5H9L4 462 aa12.66□□□□□ -0.38
TPM1-210ENST00000558264 RPAP1Q9BWH6 1393 aaPredicted RBP12.66□□□□□ -0.38
TPM1-210ENST00000558264 BCL9O00512 1426 aa12.66□□□□□ -0.38
TPM1-210ENST00000558264 MAP3K15Q6ZN16 1313 aa12.66□□□□□ -0.38
TPM1-210ENST00000558264 ITGB4P16144 1822 aa12.66□□□□□ -0.38
TPM1-210ENST00000558264 PTMSP20962 102 aa12.65□□□□□ -0.38
TPM1-210ENST00000558264 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
TPM1-210ENST00000558264 ST3GAL1Q11201 340 aa12.65□□□□□ -0.38
TPM1-210ENST00000558264 STK3Q13188 491 aa12.65□□□□□ -0.38
TPM1-210ENST00000558264 ME3Q16798 604 aa12.65□□□□□ -0.38
TPM1-210ENST00000558264 PAG1Q9NWQ8 432 aa12.65□□□□□ -0.38
TPM1-210ENST00000558264 TPCN1Q9ULQ1 816 aa12.65□□□□□ -0.38
TPM1-210ENST00000558264 COL16A1Q07092 1604 aaPredicted RBP12.65□□□□□ -0.38
TPM1-210ENST00000558264 HSP90AB3PQ58FF7 597 aa12.65□□□□□ -0.38
TPM1-210ENST00000558264 VPS53Q5VIR6 699 aa12.65□□□□□ -0.38
TPM1-210ENST00000558264 SMC3Q9UQE7 1217 aa12.65□□□□□ -0.38
TPM1-210ENST00000558264 A0A0G2JLW4 131 aa12.65□□□□□ -0.39
TPM1-210ENST00000558264 IFIT1P09914 478 aaKnown RBP12.65□□□□□ -0.39
TPM1-210ENST00000558264 PI16Q6UXB8 463 aa12.65□□□□□ -0.39
TPM1-210ENST00000558264 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.39
TPM1-210ENST00000558264 VSIG10Q8N0Z9 540 aa12.65□□□□□ -0.39
TPM1-210ENST00000558264 TEX13AQ9BXU3 409 aaPredicted RBP12.65□□□□□ -0.39
TPM1-210ENST00000558264 CEP126Q9P2H0 1117 aa12.65□□□□□ -0.39
TPM1-210ENST00000558264 GJB2P29033 226 aa12.64□□□□□ -0.39
TPM1-210ENST00000558264 GORABQ5T7V8 394 aa12.64□□□□□ -0.39
TPM1-210ENST00000558264 NLRP10Q86W26 655 aa12.64□□□□□ -0.39
TPM1-210ENST00000558264 KBTBD3Q8NAB2 608 aa12.64□□□□□ -0.39
TPM1-210ENST00000558264 KCNB2Q92953 911 aa12.64□□□□□ -0.39
TPM1-210ENST00000558264 LRRC2Q9BYS8 371 aa12.64□□□□□ -0.39
TPM1-210ENST00000558264 GREM2Q9H772 168 aa12.64□□□□□ -0.39
TPM1-210ENST00000558264 COL14A1Q05707 1796 aaKnown RBP12.64□□□□□ -0.39
TPM1-210ENST00000558264 PCCAP05165 728 aaPredicted RBP12.64□□□□□ -0.39
TPM1-210ENST00000558264 SYT1P21579 422 aa12.64□□□□□ -0.39
TPM1-210ENST00000558264 MRE11P49959 708 aa12.64□□□□□ -0.39
TPM1-210ENST00000558264 IFIT5Q13325 482 aaKnown RBP12.64□□□□□ -0.39
TPM1-210ENST00000558264 BLOC1S2Q6QNY1 142 aa12.64□□□□□ -0.39
TPM1-210ENST00000558264 ZBTB38Q8NAP3 1195 aaPredicted RBP12.64□□□□□ -0.39
TPM1-210ENST00000558264 TRMT112Q9UI30 125 aaKnown RBP12.64□□□□□ -0.39
TPM1-210ENST00000558264 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.63□□□□□ -0.39
TPM1-210ENST00000558264 SCARF1Q14162 830 aa12.63□□□□□ -0.39
TPM1-210ENST00000558264 DDB1Q16531 1140 aa12.63□□□□□ -0.39
TPM1-210ENST00000558264 ZSCAN23Q3MJ62 389 aa12.63□□□□□ -0.39
TPM1-210ENST00000558264 RNF20Q5VTR2 975 aa12.63□□□□□ -0.39
TPM1-210ENST00000558264 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
TPM1-210ENST00000558264 GADD45BO75293 160 aaPredicted RBP12.63□□□□□ -0.39
TPM1-210ENST00000558264 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
TPM1-210ENST00000558264 TM6SF1Q9BZW5 370 aa12.63□□□□□ -0.39
TPM1-210ENST00000558264 WDR33Q9C0J8 1336 aaKnown RBP12.62□□□□□ -0.39
TPM1-210ENST00000558264 ITGA6P23229 1130 aa12.62□□□□□ -0.39
TPM1-210ENST00000558264 XAGE2Q96GT9 111 aa12.62□□□□□ -0.39
TPM1-210ENST00000558264 TMEM63CQ9P1W3 806 aa12.62□□□□□ -0.39
TPM1-210ENST00000558264 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.62□□□□□ -0.39
TPM1-210ENST00000558264 VPS37CA5D8V6 355 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms