RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 CYP27B1O15528 508 aa10.01□□□□□ -0.81
SPG11-209ENST00000558253 IGKV5-2P06315 115 aa10.01□□□□□ -0.81
SPG11-209ENST00000558253 HOXB3P14651 431 aaPredicted RBP10.01□□□□□ -0.81
SPG11-209ENST00000558253 PSMA5P28066 241 aa10.01□□□□□ -0.81
SPG11-209ENST00000558253 ZNF445P59923 1031 aa10.01□□□□□ -0.81
SPG11-209ENST00000558253 RABL6Q3YEC7 729 aaPredicted RBP10.01□□□□□ -0.81
SPG11-209ENST00000558253 VPS53Q5VIR6 699 aa10.01□□□□□ -0.81
SPG11-209ENST00000558253 AACSQ86V21 672 aa10.01□□□□□ -0.81
SPG11-209ENST00000558253 ZCRB1Q8TBF4 217 aaKnown RBP10.01□□□□□ -0.81
SPG11-209ENST00000558253 SUCLG2Q96I99 432 aa10.01□□□□□ -0.81
SPG11-209ENST00000558253 ZNF496Q96IT1 587 aaPredicted RBP10.01□□□□□ -0.81
SPG11-209ENST00000558253 ALDH8A1Q9H2A2 487 aaPredicted RBP10.01□□□□□ -0.81
SPG11-209ENST00000558253 BICC1Q9H694 974 aaKnown RBP10.01□□□□□ -0.81
SPG11-209ENST00000558253 ATG3Q9NT62 314 aa10.01□□□□□ -0.81
SPG11-209ENST00000558253 PKD1L3Q7Z443 1732 aa10.01□□□□□ -0.81
SPG11-209ENST00000558253 PARP4Q9UKK3 1724 aaKnown RBP10.01□□□□□ -0.81
SPG11-209ENST00000558253 MEGF6O75095 1541 aa10.01□□□□□ -0.81
SPG11-209ENST00000558253 CRYBG1Q9Y4K1 1723 aa10□□□□□ -0.81
SPG11-209ENST00000558253 BRD1O95696 1058 aa10□□□□□ -0.81
SPG11-209ENST00000558253 ANXA1P04083 346 aa10□□□□□ -0.81
SPG11-209ENST00000558253 XRCC6P12956 609 aaKnown RBP eCLIP10□□□□□ -0.81
SPG11-209ENST00000558253 ATP5JP18859 108 aa10□□□□□ -0.81
SPG11-209ENST00000558253 NCLP19338 710 aaKnown RBP10□□□□□ -0.81
SPG11-209ENST00000558253 ANKRD1Q15327 319 aa10□□□□□ -0.81
SPG11-209ENST00000558253 CSPP1Q1MSJ5 1256 aa10□□□□□ -0.81
SPG11-209ENST00000558253 CWF19L2Q2TBE0 894 aaKnown RBP10□□□□□ -0.81
SPG11-209ENST00000558253 TSHZ3Q63HK5 1081 aa10□□□□□ -0.81
SPG11-209ENST00000558253 LRP10Q7Z4F1 713 aa10□□□□□ -0.81
SPG11-209ENST00000558253 UNC5CLQ8IV45 518 aa10□□□□□ -0.81
SPG11-209ENST00000558253 SYAP1Q96A49 352 aaPredicted RBP10□□□□□ -0.81
SPG11-209ENST00000558253 KAZALD1Q96I82 304 aa10□□□□□ -0.81
SPG11-209ENST00000558253 GPR108Q9NPR9 543 aa10□□□□□ -0.81
SPG11-209ENST00000558253 HMG20BQ9P0W2 317 aa10□□□□□ -0.81
SPG11-209ENST00000558253 SASH1O94885 1247 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 AIMP1Q12904 312 aaKnown RBP9.99□□□□□ -0.81
SPG11-209ENST00000558253 KRT32Q14532 448 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 DOK7Q18PE1 504 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 TSGA10IPQ3SY00 556 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 BRINP3Q76B58 766 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 CHMP4CQ96CF2 233 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 MYD88Q99836 296 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 ZSWIM6Q9HCJ5 1215 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 PRDM11Q9NQV5 511 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 LMBRD1Q9NUN5 540 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 SLAIN2Q9P270 581 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 BRPF3Q9ULD4 1205 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 PALD1Q9ULE6 856 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 SNX14Q9Y5W7 946 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 CYP46A1Q9Y6A2 500 aa9.99□□□□□ -0.81
SPG11-209ENST00000558253 H7C1W4 665 aa9.98□□□□□ -0.81
SPG11-209ENST00000558253 PHF14O94880 888 aa9.98□□□□□ -0.81
SPG11-209ENST00000558253 IL2RBP14784 551 aa9.98□□□□□ -0.81
SPG11-209ENST00000558253 EMP3P54852 163 aa9.98□□□□□ -0.81
SPG11-209ENST00000558253 SLC39A6Q13433 755 aa9.98□□□□□ -0.81
SPG11-209ENST00000558253 DSG2Q14126 1118 aa9.98□□□□□ -0.81
SPG11-209ENST00000558253 MCTP1Q6DN14 999 aa9.98□□□□□ -0.81
SPG11-209ENST00000558253 CWC27Q6UX04 472 aaKnown RBP9.98□□□□□ -0.81
SPG11-209ENST00000558253 VSIG10Q8N0Z9 540 aa9.98□□□□□ -0.81
SPG11-209ENST00000558253 CCDC191Q8NCU4 936 aa9.98□□□□□ -0.81
SPG11-209ENST00000558253 MAP4K1Q92918 833 aa9.98□□□□□ -0.81
SPG11-209ENST00000558253 TTC14Q96N46 770 aa9.98□□□□□ -0.81
SPG11-209ENST00000558253 GZF1Q9H116 711 aaPredicted RBP9.98□□□□□ -0.81
SPG11-209ENST00000558253 PRAMEF22A3QJZ6 481 aa9.97□□□□□ -0.81
SPG11-209ENST00000558253 LETM1O95202 739 aaPredicted RBP9.97□□□□□ -0.81
SPG11-209ENST00000558253 SLC34A2O95436 690 aa9.97□□□□□ -0.81
SPG11-209ENST00000558253 MYL6BP14649 208 aa9.97□□□□□ -0.81
SPG11-209ENST00000558253 TRIM28Q13263 835 aaKnown RBP9.97□□□□□ -0.81
SPG11-209ENST00000558253 MFSD10Q14728 455 aa9.97□□□□□ -0.81
SPG11-209ENST00000558253 NECTIN1Q15223 517 aa9.97□□□□□ -0.81
SPG11-209ENST00000558253 LRRFIP1Q32MZ4 808 aaKnown RBP9.97□□□□□ -0.81
SPG11-209ENST00000558253 TOM1L2Q6ZVM7 507 aa9.97□□□□□ -0.81
SPG11-209ENST00000558253 ZGPATQ8N5A5 531 aaKnown RBP9.97□□□□□ -0.81
SPG11-209ENST00000558253 EAF2Q96CJ1 260 aaPredicted RBP9.97□□□□□ -0.81
SPG11-209ENST00000558253 LARP6Q9BRS8 491 aaKnown RBP9.97□□□□□ -0.81
SPG11-209ENST00000558253 CWC25Q9NXE8 425 aaPredicted RBP9.97□□□□□ -0.81
SPG11-209ENST00000558253 USP16Q9Y5T5 823 aa9.97□□□□□ -0.81
SPG11-209ENST00000558253 CCDC171Q6TFL3 1326 aa9.97□□□□□ -0.81
SPG11-209ENST00000558253 A0A087WZG4 1122 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 CIAO1O76071 339 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 PDCP20941 246 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 IL15P40933 162 aaPredicted RBP9.96□□□□□ -0.82
SPG11-209ENST00000558253 RFX5P48382 616 aaPredicted RBP9.96□□□□□ -0.82
SPG11-209ENST00000558253 CASP7P55210 303 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 CCDC173Q0VFZ6 552 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 CHRNA2Q15822 529 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 RUFY3Q7L099 469 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 PLPP6Q8IY26 295 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 TMEM87AQ8NBN3 555 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 PDRG1Q9NUG6 133 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 ZDHHC9Q9Y397 364 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 RGPD5Q99666 1765 aa9.96□□□□□ -0.82
SPG11-209ENST00000558253 PRPF40AO75400 957 aaKnown RBP9.95□□□□□ -0.82
SPG11-209ENST00000558253 HMGB1P09429 215 aaKnown RBP9.95□□□□□ -0.82
SPG11-209ENST00000558253 EVA1CP58658 441 aa9.95□□□□□ -0.82
SPG11-209ENST00000558253 PTPN12Q05209 780 aaKnown RBP9.95□□□□□ -0.82
SPG11-209ENST00000558253 HS1BP3Q53T59 392 aa9.95□□□□□ -0.82
SPG11-209ENST00000558253 TNNI3KQ59H18 835 aa9.95□□□□□ -0.82
SPG11-209ENST00000558253 CABLES1Q8TDN4 633 aa9.95□□□□□ -0.82
SPG11-209ENST00000558253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.95□□□□□ -0.82
SPG11-209ENST00000558253 FSD1Q9BTV5 496 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 239 ms