RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ZNF428Q96B54 188 aa18.33■□□□□ 0.52
SNX6-210ENST00000557341 PASKQ96RG2 1323 aa18.32■□□□□ 0.52
SNX6-210ENST00000557341 ELL2O00472 640 aaPredicted RBP18.32■□□□□ 0.52
SNX6-210ENST00000557341 CCDC184Q52MB2 194 aa18.32■□□□□ 0.52
SNX6-210ENST00000557341 TMC4Q7Z404 712 aa18.32■□□□□ 0.52
SNX6-210ENST00000557341 RIC3Q7Z5B4 369 aa18.32■□□□□ 0.52
SNX6-210ENST00000557341 FAM89AQ96GI7 184 aa18.32■□□□□ 0.52
SNX6-210ENST00000557341 RTFDC1Q9BY42 306 aaPredicted RBP18.32■□□□□ 0.52
SNX6-210ENST00000557341 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
SNX6-210ENST00000557341 CLEC11AQ9Y240 323 aa18.32■□□□□ 0.52
SNX6-210ENST00000557341 PSME4Q14997 1843 aa18.32■□□□□ 0.52
SNX6-210ENST00000557341 MPNDQ8N594 471 aa18.31■□□□□ 0.52
SNX6-210ENST00000557341 PHAXQ9H814 394 aaKnown RBP18.31■□□□□ 0.52
SNX6-210ENST00000557341 TRIM28Q13263 835 aaKnown RBP18.3■□□□□ 0.52
SNX6-210ENST00000557341 CCDC30Q5VVM6 783 aa18.3■□□□□ 0.52
SNX6-210ENST00000557341 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
SNX6-210ENST00000557341 SCNN1DP51172 638 aa18.29■□□□□ 0.52
SNX6-210ENST00000557341 SF3B3Q15393 1217 aaKnown RBP18.29■□□□□ 0.52
SNX6-210ENST00000557341 CCDC27Q2M243 656 aa18.29■□□□□ 0.52
SNX6-210ENST00000557341 IRS4O14654 1257 aaPredicted RBP18.28■□□□□ 0.52
SNX6-210ENST00000557341 DDX58O95786 925 aaKnown RBP18.28■□□□□ 0.52
SNX6-210ENST00000557341 KIAA2012Q0VF49 1180 aa18.28■□□□□ 0.52
SNX6-210ENST00000557341 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
SNX6-210ENST00000557341 ZNRF3Q9ULT6 936 aa18.28■□□□□ 0.52
SNX6-210ENST00000557341 ITGBL1O95965 494 aaPredicted RBP18.27■□□□□ 0.52
SNX6-210ENST00000557341 HSP90B1P14625 803 aaKnown RBP18.27■□□□□ 0.52
SNX6-210ENST00000557341 ZBTB38Q8NAP3 1195 aaPredicted RBP18.27■□□□□ 0.52
SNX6-210ENST00000557341 TSR2Q969E8 191 aaKnown RBP18.27■□□□□ 0.52
SNX6-210ENST00000557341 MYD88Q99836 296 aa18.27■□□□□ 0.52
SNX6-210ENST00000557341 MRS2Q9HD23 443 aa18.27■□□□□ 0.52
SNX6-210ENST00000557341 CNTNAP1P78357 1384 aa18.27■□□□□ 0.51
SNX6-210ENST00000557341 CDHR2Q9BYE9 1310 aa18.26■□□□□ 0.51
SNX6-210ENST00000557341 SCN9AQ15858 1988 aa18.26■□□□□ 0.51
SNX6-210ENST00000557341 TMEM88BA6NKF7 163 aa18.26■□□□□ 0.51
SNX6-210ENST00000557341 ANP32CO43423 234 aa18.26■□□□□ 0.51
SNX6-210ENST00000557341 MAP1SQ66K74 1059 aaPredicted RBP18.26■□□□□ 0.51
SNX6-210ENST00000557341 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
SNX6-210ENST00000557341 CCDC191Q8NCU4 936 aa18.26■□□□□ 0.51
SNX6-210ENST00000557341 CELF1Q92879 486 aaKnown RBP18.26■□□□□ 0.51
SNX6-210ENST00000557341 MKRN1Q9UHC7 482 aaKnown RBP18.26■□□□□ 0.51
SNX6-210ENST00000557341 THSD7BQ9C0I4 1608 aa18.25■□□□□ 0.51
SNX6-210ENST00000557341 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
SNX6-210ENST00000557341 EPS15P42566 896 aa18.25■□□□□ 0.51
SNX6-210ENST00000557341 CXCL9Q07325 125 aa18.25■□□□□ 0.51
SNX6-210ENST00000557341 CNTROBQ8N137 903 aa18.25■□□□□ 0.51
SNX6-210ENST00000557341 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
SNX6-210ENST00000557341 STK31Q9BXU1 1019 aa18.25■□□□□ 0.51
SNX6-210ENST00000557341 IL16Q14005 1332 aa18.24■□□□□ 0.51
SNX6-210ENST00000557341 HSPA1AP0DMV8 641 aaKnown RBP18.24■□□□□ 0.51
SNX6-210ENST00000557341 HSPA1BP0DMV9 641 aaKnown RBP18.24■□□□□ 0.51
SNX6-210ENST00000557341 USP50Q70EL3 339 aaPredicted RBP18.24■□□□□ 0.51
SNX6-210ENST00000557341 METTL22Q9BUU2 404 aaPredicted RBP18.24■□□□□ 0.51
SNX6-210ENST00000557341 CWC25Q9NXE8 425 aaPredicted RBP18.24■□□□□ 0.51
SNX6-210ENST00000557341 GPRC5DQ9NZD1 345 aa18.24■□□□□ 0.51
SNX6-210ENST00000557341 PCCAP05165 728 aaPredicted RBP18.23■□□□□ 0.51
SNX6-210ENST00000557341 TWISTNBQ3B726 338 aaPredicted RBP18.23■□□□□ 0.51
SNX6-210ENST00000557341 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
SNX6-210ENST00000557341 CIAPIN1Q6FI81 312 aa18.23■□□□□ 0.51
SNX6-210ENST00000557341 ADARB2Q9NS39 739 aaKnown RBP18.23■□□□□ 0.51
SNX6-210ENST00000557341 NSFL1CQ9UNZ2 370 aaKnown RBP18.23■□□□□ 0.51
SNX6-210ENST00000557341 POLR2AP24928 1970 aaKnown RBP18.22■□□□□ 0.51
SNX6-210ENST00000557341 A0A1B0GUL6 1792 aa18.22■□□□□ 0.51
SNX6-210ENST00000557341 TNIP1Q15025 636 aa18.22■□□□□ 0.51
SNX6-210ENST00000557341 WASHC4Q2M389 1173 aa18.22■□□□□ 0.51
SNX6-210ENST00000557341 MAP3K2Q9Y2U5 619 aa18.22■□□□□ 0.51
SNX6-210ENST00000557341 PDE8AO60658 829 aa18.21■□□□□ 0.51
SNX6-210ENST00000557341 RAD17O75943 681 aa18.21■□□□□ 0.51
SNX6-210ENST00000557341 GMPSP49915 693 aaPredicted RBP18.21■□□□□ 0.51
SNX6-210ENST00000557341 CCDC152Q4G0S7 254 aa18.21■□□□□ 0.51
SNX6-210ENST00000557341 PI4KAP2A4QPH2 592 aa18.2■□□□□ 0.5
SNX6-210ENST00000557341 YDJCA8MPS7 323 aa18.2■□□□□ 0.5
SNX6-210ENST00000557341 C6orf229H3BNL8 230 aa18.2■□□□□ 0.5
SNX6-210ENST00000557341 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
SNX6-210ENST00000557341 GPSM2P81274 684 aa18.2■□□□□ 0.5
SNX6-210ENST00000557341 NEXNQ0ZGT2 675 aa18.2■□□□□ 0.5
SNX6-210ENST00000557341 KSR2Q6VAB6 950 aa18.2■□□□□ 0.5
SNX6-210ENST00000557341 PI4KAP1Q8N8J0 262 aa18.2■□□□□ 0.5
SNX6-210ENST00000557341 EYA3Q99504 573 aa18.2■□□□□ 0.5
SNX6-210ENST00000557341 BCL2L13Q9BXK5 485 aa18.2■□□□□ 0.5
SNX6-210ENST00000557341 ZNF646O15015 1829 aaPredicted RBP18.2■□□□□ 0.5
SNX6-210ENST00000557341 FANCIQ9NVI1 1328 aa18.2■□□□□ 0.5
SNX6-210ENST00000557341 COL13A1Q5TAT6 717 aaPredicted RBP18.18■□□□□ 0.5
SNX6-210ENST00000557341 DBNDD1Q9H9R9 158 aa18.18■□□□□ 0.5
SNX6-210ENST00000557341 SEC31BQ9NQW1 1179 aa18.18■□□□□ 0.5
SNX6-210ENST00000557341 POLLQ9UGP5 575 aa18.18■□□□□ 0.5
SNX6-210ENST00000557341 RASSF10A6NK89 507 aa18.17■□□□□ 0.5
SNX6-210ENST00000557341 RIMBP2O15034 1052 aa18.17■□□□□ 0.5
SNX6-210ENST00000557341 IGKV5-2P06315 115 aa18.17■□□□□ 0.5
SNX6-210ENST00000557341 TBC1D16Q8TBP0 767 aa18.17■□□□□ 0.5
SNX6-210ENST00000557341 JARID2Q92833 1246 aaPredicted RBP18.17■□□□□ 0.5
SNX6-210ENST00000557341 PODXL2Q9NZ53 605 aa18.17■□□□□ 0.5
SNX6-210ENST00000557341 ABT1Q9ULW3 272 aaKnown RBP18.17■□□□□ 0.5
SNX6-210ENST00000557341 ECE2O60344 883 aa18.16■□□□□ 0.5
SNX6-210ENST00000557341 SLC4A2P04920 1241 aa18.16■□□□□ 0.5
SNX6-210ENST00000557341 VEGFBP49765 207 aa18.16■□□□□ 0.5
SNX6-210ENST00000557341 CTSWP56202 376 aa18.16■□□□□ 0.5
SNX6-210ENST00000557341 CCDC85AQ96PX6 553 aaPredicted RBP18.16■□□□□ 0.5
SNX6-210ENST00000557341 ANKIB1Q9P2G1 1089 aa18.16■□□□□ 0.5
SNX6-210ENST00000557341 NEURL1BA8MQ27 555 aa18.15■□□□□ 0.5
SNX6-210ENST00000557341 PSMD14O00487 310 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms