RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 PPEF1O14829 653 aaPredicted RBP31.11■■■□□ 2.57
SDR39U1-221ENST00000556707 BCAR3O75815 825 aa31.11■■■□□ 2.57
SDR39U1-221ENST00000556707 BBOX1O75936 387 aa31.11■■■□□ 2.57
SDR39U1-221ENST00000556707 RASSF7Q02833 373 aa31.11■■■□□ 2.57
SDR39U1-221ENST00000556707 CCDC152Q4G0S7 254 aa31.11■■■□□ 2.57
SDR39U1-221ENST00000556707 ARHGAP45Q92619 1136 aa31.11■■■□□ 2.57
SDR39U1-221ENST00000556707 PLA2G12BQ9BX93 195 aa31.11■■■□□ 2.57
SDR39U1-221ENST00000556707 GRM8O00222 908 aa31.1■■■□□ 2.57
SDR39U1-221ENST00000556707 CTSWP56202 376 aa31.1■■■□□ 2.57
SDR39U1-221ENST00000556707 CC2D2BQ6DHV5 1058 aa31.1■■■□□ 2.57
SDR39U1-221ENST00000556707 OLFM4Q6UX06 510 aa31.1■■■□□ 2.57
SDR39U1-221ENST00000556707 LTBP3Q9NS15 1303 aa31.09■■■□□ 2.57
SDR39U1-221ENST00000556707 DICER1Q9UPY3 1922 aaKnown RBP31.09■■■□□ 2.57
SDR39U1-221ENST00000556707 C9orf78Q9NZ63 289 aaPredicted RBP31.09■■■□□ 2.57
SDR39U1-221ENST00000556707 RTKN2Q8IZC4 609 aa31.08■■■□□ 2.57
SDR39U1-221ENST00000556707 TTLL11Q8NHH1 800 aa31.08■■■□□ 2.57
SDR39U1-221ENST00000556707 IPO8O15397 1037 aaKnown RBP31.07■■■□□ 2.56
SDR39U1-221ENST00000556707 TAOK3Q9H2K8 898 aa31.07■■■□□ 2.56
SDR39U1-221ENST00000556707 ATP6V0A2Q9Y487 856 aa31.07■■■□□ 2.56
SDR39U1-221ENST00000556707 SNED1Q8TER0 1413 aa31.07■■■□□ 2.56
SDR39U1-221ENST00000556707 COL4A1P02462 1669 aa31.06■■■□□ 2.56
SDR39U1-221ENST00000556707 LMNB1P20700 586 aa31.06■■■□□ 2.56
SDR39U1-221ENST00000556707 C9orf131Q5VYM1 1079 aa31.06■■■□□ 2.56
SDR39U1-221ENST00000556707 TMC4Q7Z404 712 aa31.06■■■□□ 2.56
SDR39U1-221ENST00000556707 CELF1Q92879 486 aaKnown RBP31.06■■■□□ 2.56
SDR39U1-221ENST00000556707 GRIPAP1Q4V328 841 aa31.05■■■□□ 2.56
SDR39U1-221ENST00000556707 CCDC85AQ96PX6 553 aaPredicted RBP31.05■■■□□ 2.56
SDR39U1-221ENST00000556707 SEC31BQ9NQW1 1179 aa31.05■■■□□ 2.56
SDR39U1-221ENST00000556707 LRRC37AA6NMS7 1700 aa31.04■■■□□ 2.56
SDR39U1-221ENST00000556707 CCT4P50991 539 aaKnown RBP31.04■■■□□ 2.56
SDR39U1-221ENST00000556707 PRELPP51888 382 aa31.04■■■□□ 2.56
SDR39U1-221ENST00000556707 SP8Q8IXZ3 490 aa31.04■■■□□ 2.56
SDR39U1-221ENST00000556707 FRAT1Q92837 279 aaPredicted RBP31.04■■■□□ 2.56
SDR39U1-221ENST00000556707 TMX4Q9H1E5 349 aaPredicted RBP31.04■■■□□ 2.56
SDR39U1-221ENST00000556707 RNF181Q9P0P0 153 aa31.04■■■□□ 2.56
SDR39U1-221ENST00000556707 RTL9Q8NET4 1388 aa31.04■■■□□ 2.56
SDR39U1-221ENST00000556707 UTYO14607 1347 aa31.03■■■□□ 2.56
SDR39U1-221ENST00000556707 RPS8P62241 208 aaKnown RBP31.03■■■□□ 2.56
SDR39U1-221ENST00000556707 FKBP4Q02790 459 aaKnown RBP eCLIP31.03■■■□□ 2.56
SDR39U1-221ENST00000556707 SLC51AQ86UW1 340 aa31.03■■■□□ 2.56
SDR39U1-221ENST00000556707 CSF1RP07333 972 aa31.02■■■□□ 2.56
SDR39U1-221ENST00000556707 ATF7IPQ6VMQ6 1270 aa31.02■■■□□ 2.56
SDR39U1-221ENST00000556707 GREM2Q9H772 168 aa31.02■■■□□ 2.56
SDR39U1-221ENST00000556707 SPEF2Q9C093 1822 aa31.01■■■□□ 2.56
SDR39U1-221ENST00000556707 NBPF7P0C2Y1 421 aaPredicted RBP31.01■■■□□ 2.55
SDR39U1-221ENST00000556707 TRIM27P14373 513 aa31.01■■■□□ 2.55
SDR39U1-221ENST00000556707 YTHDC1Q96MU7 727 aaKnown RBP31.01■■■□□ 2.55
SDR39U1-221ENST00000556707 FOXO4P98177 505 aa31■■■□□ 2.55
SDR39U1-221ENST00000556707 PSMD1Q99460 953 aa31■■■□□ 2.55
SDR39U1-221ENST00000556707 USP44Q9H0E7 712 aa31■■■□□ 2.55
SDR39U1-221ENST00000556707 CDC5LQ99459 802 aaKnown RBP30.99■■■□□ 2.55
SDR39U1-221ENST00000556707 TIAM2Q8IVF5 1701 aa30.98■■■□□ 2.55
SDR39U1-221ENST00000556707 EPHA10Q5JZY3 1008 aa30.98■■■□□ 2.55
SDR39U1-221ENST00000556707 ZKSCAN2Q63HK3 967 aa30.98■■■□□ 2.55
SDR39U1-221ENST00000556707 INTS3Q68E01 1043 aaKnown RBP30.97■■■□□ 2.55
SDR39U1-221ENST00000556707 ANKRD18AQ8IVF6 992 aa30.97■■■□□ 2.55
SDR39U1-221ENST00000556707 SUCLG2Q96I99 432 aa30.97■■■□□ 2.55
SDR39U1-221ENST00000556707 FAM161AQ3B820 660 aa30.96■■■□□ 2.55
SDR39U1-221ENST00000556707 ZNF277Q9NRM2 450 aaPredicted RBP30.96■■■□□ 2.55
SDR39U1-221ENST00000556707 TNNQ9UQP3 1299 aa30.96■■■□□ 2.55
SDR39U1-221ENST00000556707 ITGA6P23229 1130 aa30.95■■■□□ 2.55
SDR39U1-221ENST00000556707 LMBR1LQ6UX01 489 aa30.95■■■□□ 2.55
SDR39U1-221ENST00000556707 MPNDQ8N594 471 aa30.95■■■□□ 2.55
SDR39U1-221ENST00000556707 KAZALD1Q96I82 304 aa30.95■■■□□ 2.55
SDR39U1-221ENST00000556707 ZNF784Q8NCA9 323 aaPredicted RBP30.94■■■□□ 2.54
SDR39U1-221ENST00000556707 ZC3H4Q9UPT8 1303 aaKnown RBP30.94■■■□□ 2.54
SDR39U1-221ENST00000556707 DPP8Q6V1X1 898 aaPredicted RBP30.93■■■□□ 2.54
SDR39U1-221ENST00000556707 CLUAP1Q96AJ1 413 aa30.93■■■□□ 2.54
SDR39U1-221ENST00000556707 RTFDC1Q9BY42 306 aaPredicted RBP30.93■■■□□ 2.54
SDR39U1-221ENST00000556707 RCAN3Q9UKA8 241 aa30.93■■■□□ 2.54
SDR39U1-221ENST00000556707 LTBP1Q14766 1721 aa30.93■■■□□ 2.54
SDR39U1-221ENST00000556707 IARSP41252 1262 aaKnown RBP30.92■■■□□ 2.54
SDR39U1-221ENST00000556707 CHMP3Q9Y3E7 222 aa30.92■■■□□ 2.54
SDR39U1-221ENST00000556707 ANKRD18BA2A2Z9 1011 aa30.91■■■□□ 2.54
SDR39U1-221ENST00000556707 IFIT5Q13325 482 aaKnown RBP30.91■■■□□ 2.54
SDR39U1-221ENST00000556707 BSDC1Q9NW68 430 aaPredicted RBP30.91■■■□□ 2.54
SDR39U1-221ENST00000556707 SUPT20HQ8NEM7 779 aa30.9■■■□□ 2.54
SDR39U1-221ENST00000556707 BICC1Q9H694 974 aaKnown RBP30.9■■■□□ 2.54
SDR39U1-221ENST00000556707 DUOX1Q9NRD9 1551 aa30.9■■■□□ 2.54
SDR39U1-221ENST00000556707 IGHMBP2P38935 993 aaKnown RBP30.89■■■□□ 2.54
SDR39U1-221ENST00000556707 GPSM2P81274 684 aa30.89■■■□□ 2.54
SDR39U1-221ENST00000556707 NSFL1CQ9UNZ2 370 aaKnown RBP30.89■■■□□ 2.54
SDR39U1-221ENST00000556707 UBTFL1P0CB47 393 aaPredicted RBP30.88■■■□□ 2.53
SDR39U1-221ENST00000556707 RABL6Q3YEC7 729 aaPredicted RBP30.88■■■□□ 2.53
SDR39U1-221ENST00000556707 ANKRD44Q8N8A2 993 aa30.88■■■□□ 2.53
SDR39U1-221ENST00000556707 VPS33BQ9H267 617 aa30.88■■■□□ 2.53
SDR39U1-221ENST00000556707 CCDC57Q2TAC2 916 aa30.87■■■□□ 2.53
SDR39U1-221ENST00000556707 DZIP1LQ8IYY4 767 aaKnown RBP30.87■■■□□ 2.53
SDR39U1-221ENST00000556707 FTSJ3Q8IY81 847 aaKnown RBP30.86■■■□□ 2.53
SDR39U1-221ENST00000556707 TMEM57Q8N5G2 664 aa30.86■■■□□ 2.53
SDR39U1-221ENST00000556707 MPHOSPH8Q99549 860 aa30.86■■■□□ 2.53
SDR39U1-221ENST00000556707 MEIS3Q99687 375 aa30.86■■■□□ 2.53
SDR39U1-221ENST00000556707 PODXL2Q9NZ53 605 aa30.86■■■□□ 2.53
SDR39U1-221ENST00000556707 HDAC5Q9UQL6 1122 aa30.86■■■□□ 2.53
SDR39U1-221ENST00000556707 LARGE2Q8N3Y3 721 aa30.85■■■□□ 2.53
SDR39U1-221ENST00000556707 COL4A5P29400 1685 aa30.84■■■□□ 2.53
SDR39U1-221ENST00000556707 PPIP5K2O43314 1243 aa30.84■■■□□ 2.53
SDR39U1-221ENST00000556707 GNAI3P08754 354 aa30.84■■■□□ 2.53
SDR39U1-221ENST00000556707 ANKIB1Q9P2G1 1089 aa30.84■■■□□ 2.53
SDR39U1-221ENST00000556707 MINPP1Q9UNW1 487 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms