RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 TRAIPQ9BWF2 469 aa10.08□□□□□ -0.8
MARK3-210ENST00000556463 ZBTB12Q9Y330 459 aaPredicted RBP10.08□□□□□ -0.8
MARK3-210ENST00000556463 USP6P35125 1406 aa10.07□□□□□ -0.8
MARK3-210ENST00000556463 KDM3BQ7LBC6 1761 aa10.07□□□□□ -0.8
MARK3-210ENST00000556463 LRMPQ12912 555 aa10.07□□□□□ -0.8
MARK3-210ENST00000556463 ADCK5Q3MIX3 580 aa10.07□□□□□ -0.8
MARK3-210ENST00000556463 FBXO31Q5XUX0 539 aaPredicted RBP10.07□□□□□ -0.8
MARK3-210ENST00000556463 NRBP1Q9UHY1 535 aa10.07□□□□□ -0.8
MARK3-210ENST00000556463 FEZ2Q9UHY8 353 aaPredicted RBP10.07□□□□□ -0.8
MARK3-210ENST00000556463 IGSF1Q8N6C5 1336 aa10.07□□□□□ -0.8
MARK3-210ENST00000556463 NCKAP5LQ9HCH0 1330 aa10.07□□□□□ -0.8
MARK3-210ENST00000556463 PLEKHG3A1L390 1219 aa10.07□□□□□ -0.8
MARK3-210ENST00000556463 SLC4A10Q6U841 1118 aa10.07□□□□□ -0.8
MARK3-210ENST00000556463 LUZP1Q86V48 1076 aa10.07□□□□□ -0.8
MARK3-210ENST00000556463 MYCBPQ99417 103 aaPredicted RBP10.07□□□□□ -0.8
MARK3-210ENST00000556463 CLSTN2Q9H4D0 955 aa10.07□□□□□ -0.8
MARK3-210ENST00000556463 CAVIN2O95810 425 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 RAD51AP2Q09MP3 1159 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 IQCB1Q15051 598 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 CACTINQ8WUQ7 758 aaKnown RBP10.06□□□□□ -0.8
MARK3-210ENST00000556463 PTPRUQ92729 1446 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 MIS18AQ9NYP9 233 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 NPHP4O75161 1426 aaPredicted RBP10.06□□□□□ -0.8
MARK3-210ENST00000556463 MTX1Q13505 466 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 HSP90AB2PQ58FF8 381 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 TSPYL4Q9UJ04 414 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 GOLIM4O00461 696 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 FOXO3O43524 673 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 PTH1RQ03431 593 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 CCDC144BQ3MJ40 725 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 CCDC30Q5VVM6 783 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 CCDC144CPQ8IYA2 1237 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 CCAR2Q8N163 923 aaKnown RBP10.06□□□□□ -0.8
MARK3-210ENST00000556463 SRRTQ9BXP5 876 aaKnown RBP10.06□□□□□ -0.8
MARK3-210ENST00000556463 NUP62CLQ9H1M0 184 aa10.06□□□□□ -0.8
MARK3-210ENST00000556463 TSPOAP1O95153 1857 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 CASTP20810 708 aaKnown RBP10.05□□□□□ -0.8
MARK3-210ENST00000556463 SLC20A2Q08357 652 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 GNL2Q13823 731 aaKnown RBP10.05□□□□□ -0.8
MARK3-210ENST00000556463 TSGA10IPQ3SY00 556 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 KMT5BQ4FZB7 885 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 CCDC83Q8IWF9 413 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 CNTROBQ8N137 903 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 ARHGEF1Q92888 912 aaKnown RBP10.05□□□□□ -0.8
MARK3-210ENST00000556463 KIF1BPQ96EK5 621 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 DDX19AQ9NUU7 478 aaKnown RBP10.05□□□□□ -0.8
MARK3-210ENST00000556463 TPCN1Q9ULQ1 816 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 TMCO4Q5TGY1 634 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 NUTM1Q86Y26 1132 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 CREBRFQ8IUR6 639 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 LRRC8AQ8IWT6 810 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 MRFAP1L1Q96HT8 127 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 PDRG1Q9NUG6 133 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 TRMT1Q9NXH9 659 aaKnown RBP10.05□□□□□ -0.8
MARK3-210ENST00000556463 NPHP3Q7Z494 1330 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 MRC1P22897 1456 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 CPA1P15085 419 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 KRT85P78386 507 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 ANO6Q4KMQ2 910 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 CDC37L1Q7L3B6 337 aa10.05□□□□□ -0.8
MARK3-210ENST00000556463 SBNO1A3KN83 1393 aa10.04□□□□□ -0.8
MARK3-210ENST00000556463 TULP2O00295 520 aa10.04□□□□□ -0.8
MARK3-210ENST00000556463 PPP1R42Q7Z4L9 355 aa10.04□□□□□ -0.8
MARK3-210ENST00000556463 MAP4K1Q92918 833 aa10.04□□□□□ -0.8
MARK3-210ENST00000556463 IL1RAPL2Q9NP60 686 aa10.04□□□□□ -0.8
MARK3-210ENST00000556463 NEMFO60524 1076 aa10.04□□□□□ -0.8
MARK3-210ENST00000556463 IRF5Q13568 498 aa10.04□□□□□ -0.8
MARK3-210ENST00000556463 SYT10Q6XYQ8 523 aa10.04□□□□□ -0.8
MARK3-210ENST00000556463 SYTL4Q96C24 671 aaPredicted RBP10.04□□□□□ -0.8
MARK3-210ENST00000556463 PGBD1Q96JS3 809 aa10.04□□□□□ -0.8
MARK3-210ENST00000556463 SCAND2PQ9GZW5 306 aaPredicted RBP10.04□□□□□ -0.8
MARK3-210ENST00000556463 PIK3C2AO00443 1686 aa10.04□□□□□ -0.8
MARK3-210ENST00000556463 GPS2Q13227 327 aa10.04□□□□□ -0.8
MARK3-210ENST00000556463 ZNF397Q8NF99 534 aaPredicted RBP10.04□□□□□ -0.8
MARK3-210ENST00000556463 ZNF622Q969S3 477 aaKnown RBP eCLIP10.04□□□□□ -0.89e-6■□□□□ 9.4
MARK3-210ENST00000556463 LARP6Q9BRS8 491 aaKnown RBP10.04□□□□□ -0.8
MARK3-210ENST00000556463 LMAN1P49257 510 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 CCZ1BP86790 482 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 CCZ1P86791 482 aaPredicted RBP10.03□□□□□ -0.8
MARK3-210ENST00000556463 OS9Q13438 667 aaPredicted RBP10.03□□□□□ -0.8
MARK3-210ENST00000556463 COL9A3Q14050 684 aaPredicted RBP10.03□□□□□ -0.8
MARK3-210ENST00000556463 DNAJC21Q5F1R6 531 aaKnown RBP10.03□□□□□ -0.8
MARK3-210ENST00000556463 AK7Q96M32 723 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 STK31Q9BXU1 1019 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 L2HGDHQ9H9P8 463 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 DACT1Q9NYF0 836 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 DTNBO60941 627 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 CCDC93Q567U6 631 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 LEO1Q8WVC0 666 aaPredicted RBP10.03□□□□□ -0.8
MARK3-210ENST00000556463 ZNF446Q9NWS9 450 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 DHX16O60231 1041 aaKnown RBP10.03□□□□□ -0.8
MARK3-210ENST00000556463 GLRX3O76003 335 aaKnown RBP10.03□□□□□ -0.8
MARK3-210ENST00000556463 UBTFL1P0CB47 393 aaPredicted RBP10.03□□□□□ -0.8
MARK3-210ENST00000556463 H2AFXP16104 143 aaPredicted RBP10.03□□□□□ -0.8
MARK3-210ENST00000556463 CEP135Q66GS9 1140 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 SPG7Q9UQ90 795 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 CYP46A1Q9Y6A2 500 aa10.03□□□□□ -0.8
MARK3-210ENST00000556463 FLT4P35916 1363 aa10.02□□□□□ -0.8
MARK3-210ENST00000556463 HSP90AB3PQ58FF7 597 aa10.02□□□□□ -0.81
MARK3-210ENST00000556463 NOM1Q5C9Z4 860 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms