RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 FKBP4Q02790 459 aaKnown RBP eCLIP15.86■□□□□ 0.13
TRAPPC6B-205ENST00000555269 CCDC85AQ96PX6 553 aaPredicted RBP15.86■□□□□ 0.13
TRAPPC6B-205ENST00000555269 RRAGCQ9HB90 399 aa15.86■□□□□ 0.13
TRAPPC6B-205ENST00000555269 ATP6V0A2Q9Y487 856 aa15.86■□□□□ 0.13
TRAPPC6B-205ENST00000555269 LTBP3Q9NS15 1303 aa15.86■□□□□ 0.13
TRAPPC6B-205ENST00000555269 KIF3CO14782 793 aa15.85■□□□□ 0.13
TRAPPC6B-205ENST00000555269 GRAPQ13588 217 aa15.85■□□□□ 0.13
TRAPPC6B-205ENST00000555269 MRPL50Q8N5N7 158 aaKnown RBP15.85■□□□□ 0.13
TRAPPC6B-205ENST00000555269 GRAPLQ8TC17 118 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC6B-205ENST00000555269 CELF1Q92879 486 aaKnown RBP15.85■□□□□ 0.13
TRAPPC6B-205ENST00000555269 SEC31BQ9NQW1 1179 aa15.85■□□□□ 0.13
TRAPPC6B-205ENST00000555269 H7C1W4 665 aa15.84■□□□□ 0.13
TRAPPC6B-205ENST00000555269 C1QTNF8P60827 252 aa15.84■□□□□ 0.13
TRAPPC6B-205ENST00000555269 GCKRQ14397 625 aa15.84■□□□□ 0.13
TRAPPC6B-205ENST00000555269 CC2D2BQ6DHV5 1058 aa15.84■□□□□ 0.13
TRAPPC6B-205ENST00000555269 SP8Q8IXZ3 490 aa15.84■□□□□ 0.13
TRAPPC6B-205ENST00000555269 SSH1Q8WYL5 1049 aa15.84■□□□□ 0.13
TRAPPC6B-205ENST00000555269 SBF1O95248 1867 aa15.84■□□□□ 0.13
TRAPPC6B-205ENST00000555269 ANKRD36CQ5JPF3 1778 aa15.83■□□□□ 0.12
TRAPPC6B-205ENST00000555269 GLTPD2A6NH11 291 aa15.83■□□□□ 0.12
TRAPPC6B-205ENST00000555269 PDE8AO60658 829 aa15.83■□□□□ 0.12
TRAPPC6B-205ENST00000555269 BEND3Q5T5X7 828 aa15.83■□□□□ 0.12
TRAPPC6B-205ENST00000555269 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
TRAPPC6B-205ENST00000555269 ARFGEF2Q9Y6D5 1785 aa15.82■□□□□ 0.12
TRAPPC6B-205ENST00000555269 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
TRAPPC6B-205ENST00000555269 RPS8P62241 208 aaKnown RBP15.82■□□□□ 0.12
TRAPPC6B-205ENST00000555269 UBE3BQ7Z3V4 1068 aa15.82■□□□□ 0.12
TRAPPC6B-205ENST00000555269 LINS1Q8NG48 757 aa15.82■□□□□ 0.12
TRAPPC6B-205ENST00000555269 PSMD1Q99460 953 aa15.82■□□□□ 0.12
TRAPPC6B-205ENST00000555269 CACNA1SQ13698 1873 aa15.82■□□□□ 0.12
TRAPPC6B-205ENST00000555269 DDNO94850 711 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC6B-205ENST00000555269 CASP7P55210 303 aa15.81■□□□□ 0.12
TRAPPC6B-205ENST00000555269 HNRNPUQ00839 825 aaKnown RBP eCLIP15.81■□□□□ 0.12
TRAPPC6B-205ENST00000555269 DPY19L2Q6NUT2 758 aa15.81■□□□□ 0.12
TRAPPC6B-205ENST00000555269 SLC4A10Q6U841 1118 aa15.81■□□□□ 0.12
TRAPPC6B-205ENST00000555269 MPNDQ8N594 471 aa15.81■□□□□ 0.12
TRAPPC6B-205ENST00000555269 KDM2BQ8NHM5 1336 aa15.81■□□□□ 0.12
TRAPPC6B-205ENST00000555269 TMX4Q9H1E5 349 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC6B-205ENST00000555269 FER1L6Q2WGJ9 1857 aa15.8■□□□□ 0.12
TRAPPC6B-205ENST00000555269 SNED1Q8TER0 1413 aa15.8■□□□□ 0.12
TRAPPC6B-205ENST00000555269 CDHR2Q9BYE9 1310 aa15.8■□□□□ 0.12
TRAPPC6B-205ENST00000555269 POTECB2RU33 542 aa15.8■□□□□ 0.12
TRAPPC6B-205ENST00000555269 HSP90B1P14625 803 aaKnown RBP15.8■□□□□ 0.12
TRAPPC6B-205ENST00000555269 GRIPAP1Q4V328 841 aa15.8■□□□□ 0.12
TRAPPC6B-205ENST00000555269 TTLL11Q8NHH1 800 aa15.8■□□□□ 0.12
TRAPPC6B-205ENST00000555269 ZC3H4Q9UPT8 1303 aaKnown RBP15.79■□□□□ 0.12
TRAPPC6B-205ENST00000555269 CCDC152Q4G0S7 254 aa15.79■□□□□ 0.12
TRAPPC6B-205ENST00000555269 DPP8Q6V1X1 898 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC6B-205ENST00000555269 CCDC88AQ3V6T2 1871 aa15.78■□□□□ 0.12
TRAPPC6B-205ENST00000555269 CTSWP56202 376 aa15.78■□□□□ 0.12
TRAPPC6B-205ENST00000555269 GPSM2P81274 684 aa15.78■□□□□ 0.12
TRAPPC6B-205ENST00000555269 AOC3Q16853 763 aa15.78■□□□□ 0.12
TRAPPC6B-205ENST00000555269 LARGE2Q8N3Y3 721 aa15.78■□□□□ 0.12
TRAPPC6B-205ENST00000555269 RTFDC1Q9BY42 306 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC6B-205ENST00000555269 GREM2Q9H772 168 aa15.78■□□□□ 0.12
TRAPPC6B-205ENST00000555269 NSFL1CQ9UNZ2 370 aaKnown RBP15.78■□□□□ 0.12
TRAPPC6B-205ENST00000555269 TAF1P21675 1872 aa15.78■□□□□ 0.12
TRAPPC6B-205ENST00000555269 COL4A1P02462 1669 aa15.77■□□□□ 0.12
TRAPPC6B-205ENST00000555269 ZNF541Q9H0D2 1346 aa15.77■□□□□ 0.12
TRAPPC6B-205ENST00000555269 FZD9O00144 591 aa15.77■□□□□ 0.12
TRAPPC6B-205ENST00000555269 PPIP5K2O43314 1243 aa15.77■□□□□ 0.12
TRAPPC6B-205ENST00000555269 VEGFAP15692 232 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC6B-205ENST00000555269 JDP2Q8WYK2 163 aa15.77■□□□□ 0.12
TRAPPC6B-205ENST00000555269 DDX60Q8IY21 1712 aaKnown RBP15.77■□□□□ 0.11
TRAPPC6B-205ENST00000555269 TOMM70O94826 608 aa15.76■□□□□ 0.11
TRAPPC6B-205ENST00000555269 ALDH1L2Q3SY69 923 aa15.76■□□□□ 0.11
TRAPPC6B-205ENST00000555269 TMC4Q7Z404 712 aa15.76■□□□□ 0.11
TRAPPC6B-205ENST00000555269 PLA2G12BQ9BX93 195 aa15.76■□□□□ 0.11
TRAPPC6B-205ENST00000555269 SRCIN1Q9C0H9 1055 aa15.76■□□□□ 0.11
TRAPPC6B-205ENST00000555269 SMC4Q9NTJ3 1288 aa15.76■□□□□ 0.11
TRAPPC6B-205ENST00000555269 POLLQ9UGP5 575 aa15.76■□□□□ 0.11
TRAPPC6B-205ENST00000555269 LAMB2P55268 1798 aa15.76■□□□□ 0.11
TRAPPC6B-205ENST00000555269 WTIPA6NIX2 430 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC6B-205ENST00000555269 RIMBP2O15034 1052 aa15.75■□□□□ 0.11
TRAPPC6B-205ENST00000555269 CSF1RP07333 972 aa15.75■□□□□ 0.11
TRAPPC6B-205ENST00000555269 FOXO4P98177 505 aa15.75■□□□□ 0.11
TRAPPC6B-205ENST00000555269 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC6B-205ENST00000555269 EPHA10Q5JZY3 1008 aa15.75■□□□□ 0.11
TRAPPC6B-205ENST00000555269 ANKRD18AQ8IVF6 992 aa15.75■□□□□ 0.11
TRAPPC6B-205ENST00000555269 SUPT20HQ8NEM7 779 aa15.75■□□□□ 0.11
TRAPPC6B-205ENST00000555269 GPR101Q96P66 508 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC6B-205ENST00000555269 C9orf78Q9NZ63 289 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC6B-205ENST00000555269 NOB1Q9ULX3 412 aaKnown RBP15.75■□□□□ 0.11
TRAPPC6B-205ENST00000555269 C6orf229H3BNL8 230 aa15.74■□□□□ 0.11
TRAPPC6B-205ENST00000555269 GRM8O00222 908 aa15.74■□□□□ 0.11
TRAPPC6B-205ENST00000555269 ALDH1L1O75891 902 aa15.74■□□□□ 0.11
TRAPPC6B-205ENST00000555269 RARSP54136 660 aaKnown RBP15.74■□□□□ 0.11
TRAPPC6B-205ENST00000555269 C16orf71Q8IYS4 520 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC6B-205ENST00000555269 GJA3Q9Y6H8 435 aa15.74■□□□□ 0.11
TRAPPC6B-205ENST00000555269 COL4A5P29400 1685 aa15.73■□□□□ 0.11
TRAPPC6B-205ENST00000555269 PTPRCP08575 1304 aa15.73■□□□□ 0.11
TRAPPC6B-205ENST00000555269 CT47B1P0C2W7 299 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC6B-205ENST00000555269 NIM1KQ8IY84 436 aa15.73■□□□□ 0.11
TRAPPC6B-205ENST00000555269 TBC1D16Q8TBP0 767 aa15.73■□□□□ 0.11
TRAPPC6B-205ENST00000555269 VPS33BQ9H267 617 aa15.73■□□□□ 0.11
TRAPPC6B-205ENST00000555269 ANKIB1Q9P2G1 1089 aa15.73■□□□□ 0.11
TRAPPC6B-205ENST00000555269 NBPF7P0C2Y1 421 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC6B-205ENST00000555269 ITGA6P23229 1130 aa15.72■□□□□ 0.11
TRAPPC6B-205ENST00000555269 EIF6P56537 245 aaKnown RBP15.72■□□□□ 0.11
TRAPPC6B-205ENST00000555269 KIAA2012Q0VF49 1180 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms