RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 HDGFL1Q5TGJ6 251 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 DLK2Q6UY11 383 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 MPNDQ8N594 471 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 GRAPLQ8TC17 118 aaPredicted RBP13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 CELF1Q92879 486 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 GPRC5DQ9NZD1 345 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 ZNRF3Q9ULT6 936 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 DUOX1Q9NRD9 1551 aa13.17□□□□□ -0.3
HNRNPC-218ENST00000555215 ZNF853P0CG23 659 aa13.17□□□□□ -0.3
HNRNPC-218ENST00000555215 LMOD1P29536 600 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-218ENST00000555215 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
HNRNPC-218ENST00000555215 DUSP27Q5VZP5 1158 aa13.17□□□□□ -0.3
HNRNPC-218ENST00000555215 DPP8Q6V1X1 898 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-218ENST00000555215 ANKRD13DQ6ZTN6 518 aa13.17□□□□□ -0.3
HNRNPC-218ENST00000555215 PLBD2Q8NHP8 589 aa13.17□□□□□ -0.3
HNRNPC-218ENST00000555215 GPR101Q96P66 508 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-218ENST00000555215 MBIPQ9NS73 344 aa13.17□□□□□ -0.3
HNRNPC-218ENST00000555215 ANKRD36CQ5JPF3 1778 aa13.17□□□□□ -0.3
HNRNPC-218ENST00000555215 WDR33Q9C0J8 1336 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-218ENST00000555215 ELL2O00472 640 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-218ENST00000555215 LBX1P52954 281 aa13.16□□□□□ -0.3
HNRNPC-218ENST00000555215 USP50Q70EL3 339 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-218ENST00000555215 DDX46Q7L014 1031 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-218ENST00000555215 TRPM4Q8TD43 1214 aa13.16□□□□□ -0.3
HNRNPC-218ENST00000555215 CFAP44Q96MT7 982 aa13.16□□□□□ -0.3
HNRNPC-218ENST00000555215 PHAXQ9H814 394 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-218ENST00000555215 PRKRIP1Q9H875 184 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-218ENST00000555215 KCNQ5Q9NR82 932 aa13.16□□□□□ -0.3
HNRNPC-218ENST00000555215 ABT1Q9ULW3 272 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-218ENST00000555215 APAF1O14727 1248 aa13.15□□□□□ -0.3
HNRNPC-218ENST00000555215 HSPA8P11142 646 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-218ENST00000555215 WDR43Q15061 677 aaKnown RBP eCLIP13.15□□□□□ -0.3
HNRNPC-218ENST00000555215 CIAPIN1Q6FI81 312 aa13.15□□□□□ -0.3
HNRNPC-218ENST00000555215 CYP4F22Q6NT55 531 aa13.15□□□□□ -0.3
HNRNPC-218ENST00000555215 JARID2Q92833 1246 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-218ENST00000555215 GLIS2Q9BZE0 524 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-218ENST00000555215 VPS33BQ9H267 617 aa13.15□□□□□ -0.3
HNRNPC-218ENST00000555215 ADARB2Q9NS39 739 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-218ENST00000555215 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-218ENST00000555215 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-218ENST00000555215 CTCFP49711 727 aaPredicted RBP13.14□□□□□ -0.31
HNRNPC-218ENST00000555215 GPSM2P81274 684 aa13.14□□□□□ -0.31
HNRNPC-218ENST00000555215 SF3B3Q15393 1217 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-218ENST00000555215 CCDC184Q52MB2 194 aa13.14□□□□□ -0.31
HNRNPC-218ENST00000555215 C8orf58Q8NAV2 365 aa13.14□□□□□ -0.31
HNRNPC-218ENST00000555215 SUPT20HQ8NEM7 779 aa13.14□□□□□ -0.31
HNRNPC-218ENST00000555215 PRDM10Q9NQV6 1147 aa13.14□□□□□ -0.31
HNRNPC-218ENST00000555215 DBF4Q9UBU7 674 aaPredicted RBP13.14□□□□□ -0.31
HNRNPC-218ENST00000555215 POLLQ9UGP5 575 aa13.14□□□□□ -0.31
HNRNPC-218ENST00000555215 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
HNRNPC-218ENST00000555215 AOC2O75106 756 aa13.13□□□□□ -0.31
HNRNPC-218ENST00000555215 EGFRP00533 1210 aa13.13□□□□□ -0.31
HNRNPC-218ENST00000555215 HOXB7P09629 217 aa13.13□□□□□ -0.31
HNRNPC-218ENST00000555215 GRM1Q13255 1194 aa13.13□□□□□ -0.31
HNRNPC-218ENST00000555215 CAPNS2Q96L46 248 aa13.13□□□□□ -0.31
HNRNPC-218ENST00000555215 TMX4Q9H1E5 349 aaPredicted RBP13.13□□□□□ -0.31
HNRNPC-218ENST00000555215 DBNDD1Q9H9R9 158 aa13.13□□□□□ -0.31
HNRNPC-218ENST00000555215 SEC31BQ9NQW1 1179 aa13.13□□□□□ -0.31
HNRNPC-218ENST00000555215 PGAP2Q9UHJ9 254 aa13.13□□□□□ -0.31
HNRNPC-218ENST00000555215 PSMD14O00487 310 aa13.12□□□□□ -0.31
HNRNPC-218ENST00000555215 IRS4O14654 1257 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-218ENST00000555215 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-218ENST00000555215 HYPKQ9NX55 129 aa13.12□□□□□ -0.31
HNRNPC-218ENST00000555215 CNOT7Q9UIV1 285 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-218ENST00000555215 NSFL1CQ9UNZ2 370 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-218ENST00000555215 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
HNRNPC-218ENST00000555215 WTIPA6NIX2 430 aaPredicted RBP13.11□□□□□ -0.31
HNRNPC-218ENST00000555215 CELF2O95319 508 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-218ENST00000555215 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
HNRNPC-218ENST00000555215 PAXIP1Q6ZW49 1069 aaPredicted RBP13.11□□□□□ -0.31
HNRNPC-218ENST00000555215 SAMD7Q7Z3H4 446 aa13.11□□□□□ -0.31
HNRNPC-218ENST00000555215 TSPYL6Q8N831 410 aa13.11□□□□□ -0.31
HNRNPC-218ENST00000555215 AIDAQ96BJ3 306 aa13.11□□□□□ -0.31
HNRNPC-218ENST00000555215 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
HNRNPC-218ENST00000555215 BCL2L13Q9BXK5 485 aa13.11□□□□□ -0.31
HNRNPC-218ENST00000555215 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
HNRNPC-218ENST00000555215 LRRC37AA6NMS7 1700 aa13.1□□□□□ -0.31
HNRNPC-218ENST00000555215 RTL9Q8NET4 1388 aa13.1□□□□□ -0.31
HNRNPC-218ENST00000555215 WASHC4Q2M389 1173 aa13.1□□□□□ -0.31
HNRNPC-218ENST00000555215 SAPCD2Q86UD0 394 aa13.1□□□□□ -0.31
HNRNPC-218ENST00000555215 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
HNRNPC-218ENST00000555215 TBC1D16Q8TBP0 767 aa13.1□□□□□ -0.31
HNRNPC-218ENST00000555215 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-218ENST00000555215 MYD88Q99836 296 aa13.1□□□□□ -0.31
HNRNPC-218ENST00000555215 C6orf229H3BNL8 230 aa13.09□□□□□ -0.31
HNRNPC-218ENST00000555215 RPS8P62241 208 aaKnown RBP13.09□□□□□ -0.31
HNRNPC-218ENST00000555215 TNIP1Q15025 636 aa13.09□□□□□ -0.31
HNRNPC-218ENST00000555215 TBC1D10BQ4KMP7 808 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-218ENST00000555215 RIC3Q7Z5B4 369 aa13.09□□□□□ -0.31
HNRNPC-218ENST00000555215 USP48Q86UV5 1035 aa13.09□□□□□ -0.31
HNRNPC-218ENST00000555215 TRPM7Q96QT4 1865 aa13.09□□□□□ -0.31
HNRNPC-218ENST00000555215 IFT57Q9NWB7 429 aa13.09□□□□□ -0.31
HNRNPC-218ENST00000555215 ASTN2O75129 1339 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-218ENST00000555215 ECE2O60344 883 aa13.08□□□□□ -0.32
HNRNPC-218ENST00000555215 MAP2K1Q02750 393 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-218ENST00000555215 TMC4Q7Z404 712 aa13.08□□□□□ -0.32
HNRNPC-218ENST00000555215 ZBTB38Q8NAP3 1195 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-218ENST00000555215 ZNF408Q9H9D4 720 aa13.08□□□□□ -0.32
HNRNPC-218ENST00000555215 SCN9AQ15858 1988 aa13.08□□□□□ -0.32
HNRNPC-218ENST00000555215 POLR2AP24928 1970 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms