RNA–Protein interactions for RNA: ENST00000555034.5

FOXN3-208, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-208ENST00000555034 WDR90Q96KV7 1748 aa10.1□□□□□ -0.79
FOXN3-208ENST00000555034 HOXA10P31260 410 aaPredicted RBP10.1□□□□□ -0.79
FOXN3-208ENST00000555034 DCTN1Q14203 1278 aa10.1□□□□□ -0.79
FOXN3-208ENST00000555034 HSP90AB3PQ58FF7 597 aa10.1□□□□□ -0.79
FOXN3-208ENST00000555034 LDHDQ86WU2 507 aa10.1□□□□□ -0.79
FOXN3-208ENST00000555034 JDP2Q8WYK2 163 aa10.1□□□□□ -0.79
FOXN3-208ENST00000555034 KHSRPQ92945 711 aaKnown RBP eCLIP10.1□□□□□ -0.79
FOXN3-208ENST00000555034 BCORQ6W2J9 1755 aa10.09□□□□□ -0.79
FOXN3-208ENST00000555034 PRAMEF22A3QJZ6 481 aa10.09□□□□□ -0.79
FOXN3-208ENST00000555034 POTECB2RU33 542 aa10.09□□□□□ -0.79
FOXN3-208ENST00000555034 GIGYF2Q6Y7W6 1299 aaKnown RBP10.09□□□□□ -0.79
FOXN3-208ENST00000555034 GPC2Q8N158 579 aa10.09□□□□□ -0.79
FOXN3-208ENST00000555034 RPGRQ92834 1020 aaKnown RBP10.09□□□□□ -0.79
FOXN3-208ENST00000555034 RBM17Q96I25 401 aaKnown RBP10.09□□□□□ -0.79
FOXN3-208ENST00000555034 CRAMP1Q96RY5 1269 aa10.09□□□□□ -0.79
FOXN3-208ENST00000555034 DDNO94850 711 aaPredicted RBP10.08□□□□□ -0.8
FOXN3-208ENST00000555034 IARSP41252 1262 aaKnown RBP10.08□□□□□ -0.8
FOXN3-208ENST00000555034 LSM11P83369 360 aaKnown RBP eCLIP10.08□□□□□ -0.8
FOXN3-208ENST00000555034 CCDC24Q8N4L8 307 aa10.08□□□□□ -0.8
FOXN3-208ENST00000555034 NLRP3Q96P20 1036 aa10.08□□□□□ -0.8
FOXN3-208ENST00000555034 CHMP4AQ9BY43 222 aa10.08□□□□□ -0.8
FOXN3-208ENST00000555034 HACL1Q9UJ83 578 aa10.08□□□□□ -0.8
FOXN3-208ENST00000555034 RRP7AQ9Y3A4 280 aaKnown RBP10.08□□□□□ -0.8
FOXN3-208ENST00000555034 FZD9O00144 591 aa10.07□□□□□ -0.8
FOXN3-208ENST00000555034 PIP4K2AP48426 406 aaPredicted RBP10.07□□□□□ -0.8
FOXN3-208ENST00000555034 EIF6P56537 245 aaKnown RBP10.07□□□□□ -0.8
FOXN3-208ENST00000555034 RIPK4P57078 832 aa10.07□□□□□ -0.8
FOXN3-208ENST00000555034 HLFQ16534 295 aa10.07□□□□□ -0.8
FOXN3-208ENST00000555034 ZNF34Q8IZ26 560 aa10.07□□□□□ -0.8
FOXN3-208ENST00000555034 SUPT20HQ8NEM7 779 aa10.07□□□□□ -0.8
FOXN3-208ENST00000555034 SPOCK2Q92563 424 aa10.07□□□□□ -0.8
FOXN3-208ENST00000555034 MS4A4AQ96JQ5 239 aa10.07□□□□□ -0.8
FOXN3-208ENST00000555034 TAF1DQ9H5J8 278 aaPredicted RBP10.07□□□□□ -0.8
FOXN3-208ENST00000555034 MIS18AQ9NYP9 233 aa10.07□□□□□ -0.8
FOXN3-208ENST00000555034 TSPYL4Q9UJ04 414 aa10.07□□□□□ -0.8
FOXN3-208ENST00000555034 TIAM2Q8IVF5 1701 aa10.07□□□□□ -0.8
FOXN3-208ENST00000555034 FER1L6Q2WGJ9 1857 aa10.06□□□□□ -0.8
FOXN3-208ENST00000555034 ANKRD31Q8N7Z5 1873 aa10.06□□□□□ -0.8
FOXN3-208ENST00000555034 HOXB7P09629 217 aa10.06□□□□□ -0.8
FOXN3-208ENST00000555034 SLC10A5Q5PT55 438 aa10.06□□□□□ -0.8
FOXN3-208ENST00000555034 TMC4Q7Z404 712 aa10.06□□□□□ -0.8
FOXN3-208ENST00000555034 IFNLR1Q8IU57 520 aaPredicted RBP10.06□□□□□ -0.8
FOXN3-208ENST00000555034 SYNE4Q8N205 404 aa10.06□□□□□ -0.8
FOXN3-208ENST00000555034 ARFGEF2Q9Y6D5 1785 aa10.06□□□□□ -0.8
FOXN3-208ENST00000555034 ZNF316A6NFI3 1004 aaPredicted RBP10.05□□□□□ -0.8
FOXN3-208ENST00000555034 FAM177BA6PVY3 158 aa10.05□□□□□ -0.8
FOXN3-208ENST00000555034 BBOX1O75936 387 aa10.05□□□□□ -0.8
FOXN3-208ENST00000555034 MYL6BP14649 208 aa10.05□□□□□ -0.8
FOXN3-208ENST00000555034 LMOD1P29536 600 aaPredicted RBP10.05□□□□□ -0.8
FOXN3-208ENST00000555034 NGEFQ8N5V2 710 aa10.05□□□□□ -0.8
FOXN3-208ENST00000555034 UTP14AQ9BVJ6 771 aaKnown RBP10.05□□□□□ -0.8
FOXN3-208ENST00000555034 ZNF277Q9NRM2 450 aaPredicted RBP10.05□□□□□ -0.8
FOXN3-208ENST00000555034 MYBBP1AQ9BQG0 1328 aaKnown RBP10.05□□□□□ -0.8
FOXN3-208ENST00000555034 COL11A2P13942 1736 aaPredicted RBP10.04□□□□□ -0.8
FOXN3-208ENST00000555034 LAMB4A4D0S4 1761 aa10.04□□□□□ -0.8
FOXN3-208ENST00000555034 DICER1Q9UPY3 1922 aaKnown RBP10.04□□□□□ -0.8
FOXN3-208ENST00000555034 TMEM88BA6NKF7 163 aa10.04□□□□□ -0.8
FOXN3-208ENST00000555034 NTSR2O95665 410 aa10.04□□□□□ -0.8
FOXN3-208ENST00000555034 HSP90B1P14625 803 aaKnown RBP10.04□□□□□ -0.8
FOXN3-208ENST00000555034 EPHX2P34913 555 aa10.04□□□□□ -0.8
FOXN3-208ENST00000555034 TMPOP42166 694 aaKnown RBP10.04□□□□□ -0.8
FOXN3-208ENST00000555034 HTRA3P83110 453 aa10.04□□□□□ -0.8
FOXN3-208ENST00000555034 CALD1Q05682 793 aaKnown RBP10.04□□□□□ -0.8
FOXN3-208ENST00000555034 WDR43Q15061 677 aaKnown RBP eCLIP10.04□□□□□ -0.8
FOXN3-208ENST00000555034 SUSD4Q5VX71 490 aa10.04□□□□□ -0.8
FOXN3-208ENST00000555034 TTLL7Q6ZT98 887 aa10.04□□□□□ -0.8
FOXN3-208ENST00000555034 ZBTB3Q9H5J0 574 aa10.04□□□□□ -0.8
FOXN3-208ENST00000555034 PASKQ96RG2 1323 aa10.04□□□□□ -0.8
FOXN3-208ENST00000555034 SCN4AP35499 1836 aa10.03□□□□□ -0.8
FOXN3-208ENST00000555034 PPEF1O14829 653 aaPredicted RBP10.03□□□□□ -0.8
FOXN3-208ENST00000555034 USP50Q70EL3 339 aaPredicted RBP10.03□□□□□ -0.8
FOXN3-208ENST00000555034 NUTM1Q86Y26 1132 aa10.03□□□□□ -0.8
FOXN3-208ENST00000555034 LARGE2Q8N3Y3 721 aa10.03□□□□□ -0.8
FOXN3-208ENST00000555034 RUNDC1Q96C34 613 aa10.03□□□□□ -0.8
FOXN3-208ENST00000555034 DDX21Q9NR30 783 aaKnown RBP eCLIP10.03□□□□□ -0.8
FOXN3-208ENST00000555034 ATP6V0A2Q9Y487 856 aa10.03□□□□□ -0.8
FOXN3-208ENST00000555034 KDM3BQ7LBC6 1761 aa10.03□□□□□ -0.8
FOXN3-208ENST00000555034 CDHR2Q9BYE9 1310 aa10.03□□□□□ -0.8
FOXN3-208ENST00000555034 SLX4Q8IY92 1834 aa10.03□□□□□ -0.8
FOXN3-208ENST00000555034 CHL1O00533 1208 aa10.02□□□□□ -0.81
FOXN3-208ENST00000555034 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
FOXN3-208ENST00000555034 HSPA1AP0DMV8 641 aaKnown RBP10.02□□□□□ -0.81
FOXN3-208ENST00000555034 HSPA1BP0DMV9 641 aaKnown RBP10.02□□□□□ -0.81
FOXN3-208ENST00000555034 EIF2S2P20042 333 aaKnown RBP10.02□□□□□ -0.81
FOXN3-208ENST00000555034 GPTP24298 496 aa10.02□□□□□ -0.81
FOXN3-208ENST00000555034 PDIA6Q15084 440 aa10.02□□□□□ -0.81
FOXN3-208ENST00000555034 LRP10Q7Z4F1 713 aa10.02□□□□□ -0.81
FOXN3-208ENST00000555034 SP8Q8IXZ3 490 aa10.02□□□□□ -0.81
FOXN3-208ENST00000555034 NIM1KQ8IY84 436 aa10.02□□□□□ -0.81
FOXN3-208ENST00000555034 TNS4Q8IZW8 715 aa10.02□□□□□ -0.81
FOXN3-208ENST00000555034 RTFDC1Q9BY42 306 aaPredicted RBP10.02□□□□□ -0.81
FOXN3-208ENST00000555034 PLA2G2EQ9NZK7 142 aa10.02□□□□□ -0.81
FOXN3-208ENST00000555034 DBF4Q9UBU7 674 aaPredicted RBP10.02□□□□□ -0.81
FOXN3-208ENST00000555034 UBN2Q6ZU65 1347 aa10.02□□□□□ -0.81
FOXN3-208ENST00000555034 CNTNAP1P78357 1384 aa10.01□□□□□ -0.81
FOXN3-208ENST00000555034 ABCC12Q96J65 1359 aa10.01□□□□□ -0.81
FOXN3-208ENST00000555034 SNED1Q8TER0 1413 aa10.01□□□□□ -0.81
FOXN3-208ENST00000555034 TCIRG1Q13488 830 aa10.01□□□□□ -0.81
FOXN3-208ENST00000555034 EAPPQ56P03 285 aaPredicted RBP10.01□□□□□ -0.81
FOXN3-208ENST00000555034 DDX46Q7L014 1031 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms