RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 CDHR2Q9BYE9 1310 aa16.84■□□□□ 0.29
APEX1-208ENST00000554813 GLTPD2A6NH11 291 aa16.83■□□□□ 0.28
APEX1-208ENST00000554813 H7C1W4 665 aa16.83■□□□□ 0.28
APEX1-208ENST00000554813 MRPL50Q8N5N7 158 aaKnown RBP16.83■□□□□ 0.28
APEX1-208ENST00000554813 CCDC88AQ3V6T2 1871 aa16.82■□□□□ 0.28
APEX1-208ENST00000554813 LAMB2P55268 1798 aa16.82■□□□□ 0.28
APEX1-208ENST00000554813 F6X3S4 739 aa16.82■□□□□ 0.28
APEX1-208ENST00000554813 IARSP41252 1262 aaKnown RBP16.82■□□□□ 0.28
APEX1-208ENST00000554813 RPS8P62241 208 aaKnown RBP16.82■□□□□ 0.28
APEX1-208ENST00000554813 HNRNPUQ00839 825 aaKnown RBP eCLIP16.82■□□□□ 0.28
APEX1-208ENST00000554813 ALDH1L2Q3SY69 923 aa16.82■□□□□ 0.28
APEX1-208ENST00000554813 SUPT20HQ8NEM7 779 aa16.82■□□□□ 0.28
APEX1-208ENST00000554813 DDX60Q8IY21 1712 aaKnown RBP16.82■□□□□ 0.28
APEX1-208ENST00000554813 BEND3Q5T5X7 828 aa16.81■□□□□ 0.28
APEX1-208ENST00000554813 SLC4A10Q6U841 1118 aa16.81■□□□□ 0.28
APEX1-208ENST00000554813 DPP8Q6V1X1 898 aaPredicted RBP16.81■□□□□ 0.28
APEX1-208ENST00000554813 UBE3BQ7Z3V4 1068 aa16.81■□□□□ 0.28
APEX1-208ENST00000554813 MPNDQ8N594 471 aa16.81■□□□□ 0.28
APEX1-208ENST00000554813 JDP2Q8WYK2 163 aa16.81■□□□□ 0.28
APEX1-208ENST00000554813 SSH1Q8WYL5 1049 aa16.81■□□□□ 0.28
APEX1-208ENST00000554813 VPS33BQ9H267 617 aa16.81■□□□□ 0.28
APEX1-208ENST00000554813 NMRK2Q9NPI5 230 aa16.81■□□□□ 0.28
APEX1-208ENST00000554813 PTPRCP08575 1304 aa16.8■□□□□ 0.28
APEX1-208ENST00000554813 C1QTNF8P60827 252 aa16.8■□□□□ 0.28
APEX1-208ENST00000554813 CELF1Q92879 486 aaKnown RBP16.8■□□□□ 0.28
APEX1-208ENST00000554813 RRAGCQ9HB90 399 aa16.8■□□□□ 0.28
APEX1-208ENST00000554813 KIF3CO14782 793 aa16.79■□□□□ 0.28
APEX1-208ENST00000554813 CTSWP56202 376 aa16.79■□□□□ 0.28
APEX1-208ENST00000554813 TTLL11Q8NHH1 800 aa16.79■□□□□ 0.28
APEX1-208ENST00000554813 SEC31BQ9NQW1 1179 aa16.79■□□□□ 0.28
APEX1-208ENST00000554813 SNED1Q8TER0 1413 aa16.79■□□□□ 0.28
APEX1-208ENST00000554813 DICER1Q9UPY3 1922 aaKnown RBP16.78■□□□□ 0.28
APEX1-208ENST00000554813 ALDH1L1O75891 902 aa16.78■□□□□ 0.28
APEX1-208ENST00000554813 VEGFAP15692 232 aaPredicted RBP16.78■□□□□ 0.28
APEX1-208ENST00000554813 C16orf71Q8IYS4 520 aaPredicted RBP16.78■□□□□ 0.28
APEX1-208ENST00000554813 LARGE2Q8N3Y3 721 aa16.78■□□□□ 0.28
APEX1-208ENST00000554813 CCDC85AQ96PX6 553 aaPredicted RBP16.78■□□□□ 0.28
APEX1-208ENST00000554813 PLA2G12BQ9BX93 195 aa16.78■□□□□ 0.28
APEX1-208ENST00000554813 BCL2L13Q9BXK5 485 aa16.78■□□□□ 0.28
APEX1-208ENST00000554813 RTFDC1Q9BY42 306 aaPredicted RBP16.78■□□□□ 0.28
APEX1-208ENST00000554813 SRCIN1Q9C0H9 1055 aa16.78■□□□□ 0.28
APEX1-208ENST00000554813 SMC4Q9NTJ3 1288 aa16.78■□□□□ 0.28
APEX1-208ENST00000554813 CASP7P55210 303 aa16.77■□□□□ 0.28
APEX1-208ENST00000554813 SLC51AQ86UW1 340 aa16.77■□□□□ 0.28
APEX1-208ENST00000554813 ANKRD18AQ8IVF6 992 aa16.77■□□□□ 0.28
APEX1-208ENST00000554813 CDC5LQ99459 802 aaKnown RBP16.77■□□□□ 0.28
APEX1-208ENST00000554813 C9orf78Q9NZ63 289 aaPredicted RBP16.77■□□□□ 0.28
APEX1-208ENST00000554813 NSFL1CQ9UNZ2 370 aaKnown RBP16.77■□□□□ 0.28
APEX1-208ENST00000554813 FZD9O00144 591 aa16.76■□□□□ 0.27
APEX1-208ENST00000554813 PPIP5K2O43314 1243 aa16.76■□□□□ 0.27
APEX1-208ENST00000554813 TOMM70O94826 608 aa16.76■□□□□ 0.27
APEX1-208ENST00000554813 TIAM2Q8IVF5 1701 aa16.76■□□□□ 0.27
APEX1-208ENST00000554813 TAF1P21675 1872 aa16.76■□□□□ 0.27
APEX1-208ENST00000554813 GRM8O00222 908 aa16.75■□□□□ 0.27
APEX1-208ENST00000554813 DDNO94850 711 aaPredicted RBP16.75■□□□□ 0.27
APEX1-208ENST00000554813 EIF6P56537 245 aaKnown RBP16.75■□□□□ 0.27
APEX1-208ENST00000554813 NIM1KQ8IY84 436 aa16.75■□□□□ 0.27
APEX1-208ENST00000554813 GREM2Q9H772 168 aa16.75■□□□□ 0.27
APEX1-208ENST00000554813 CSF1RP07333 972 aa16.74■□□□□ 0.27
APEX1-208ENST00000554813 AOC3Q16853 763 aa16.74■□□□□ 0.27
APEX1-208ENST00000554813 ANKIB1Q9P2G1 1089 aa16.74■□□□□ 0.27
APEX1-208ENST00000554813 RTL9Q8NET4 1388 aa16.74■□□□□ 0.27
APEX1-208ENST00000554813 C6orf229H3BNL8 230 aa16.73■□□□□ 0.27
APEX1-208ENST00000554813 RARSP54136 660 aaKnown RBP16.73■□□□□ 0.27
APEX1-208ENST00000554813 BRPF1P55201 1214 aaPredicted RBP16.73■□□□□ 0.27
APEX1-208ENST00000554813 GPSM2P81274 684 aa16.73■□□□□ 0.27
APEX1-208ENST00000554813 KIAA2012Q0VF49 1180 aa16.73■□□□□ 0.27
APEX1-208ENST00000554813 WASHC4Q2M389 1173 aa16.73■□□□□ 0.27
APEX1-208ENST00000554813 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
APEX1-208ENST00000554813 IQCA1LA6NCM1 817 aa16.72■□□□□ 0.27
APEX1-208ENST00000554813 ITGA6P23229 1130 aa16.72■□□□□ 0.27
APEX1-208ENST00000554813 IGHMBP2P38935 993 aaKnown RBP16.72■□□□□ 0.27
APEX1-208ENST00000554813 FOXO4P98177 505 aa16.72■□□□□ 0.27
APEX1-208ENST00000554813 GPC2Q8N158 579 aa16.72■□□□□ 0.27
APEX1-208ENST00000554813 RBM46Q8TBY0 533 aaKnown RBP16.72■□□□□ 0.27
APEX1-208ENST00000554813 EYA3Q99504 573 aa16.72■□□□□ 0.27
APEX1-208ENST00000554813 BSDC1Q9NW68 430 aaPredicted RBP16.72■□□□□ 0.27
APEX1-208ENST00000554813 PODXL2Q9NZ53 605 aa16.72■□□□□ 0.27
APEX1-208ENST00000554813 ZNRF3Q9ULT6 936 aa16.72■□□□□ 0.27
APEX1-208ENST00000554813 ZNF541Q9H0D2 1346 aa16.71■□□□□ 0.27
APEX1-208ENST00000554813 ANKRD18BA2A2Z9 1011 aa16.71■□□□□ 0.27
APEX1-208ENST00000554813 POTECB2RU33 542 aa16.71■□□□□ 0.27
APEX1-208ENST00000554813 TBC1D16Q8TBP0 767 aa16.71■□□□□ 0.27
APEX1-208ENST00000554813 L3MBTL3Q96JM7 780 aaPredicted RBP16.71■□□□□ 0.27
APEX1-208ENST00000554813 API5Q9BZZ5 524 aaKnown RBP16.71■□□□□ 0.27
APEX1-208ENST00000554813 POLLQ9UGP5 575 aa16.71■□□□□ 0.27
APEX1-208ENST00000554813 ZBED9Q6R2W3 1325 aa16.7■□□□□ 0.26
APEX1-208ENST00000554813 IFIT5Q13325 482 aaKnown RBP16.7■□□□□ 0.26
APEX1-208ENST00000554813 FAM161AQ3B820 660 aa16.7■□□□□ 0.26
APEX1-208ENST00000554813 LMBR1LQ6UX01 489 aa16.7■□□□□ 0.26
APEX1-208ENST00000554813 MPHOSPH8Q99549 860 aa16.7■□□□□ 0.26
APEX1-208ENST00000554813 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
APEX1-208ENST00000554813 GGA1Q9UJY5 639 aa16.7■□□□□ 0.26
APEX1-208ENST00000554813 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
APEX1-208ENST00000554813 GJA3Q9Y6H8 435 aa16.7■□□□□ 0.26
APEX1-208ENST00000554813 MYH3P11055 1940 aa16.7■□□□□ 0.26
APEX1-208ENST00000554813 UTYO14607 1347 aa16.7■□□□□ 0.26
APEX1-208ENST00000554813 XDHP47989 1333 aa16.7■□□□□ 0.26
APEX1-208ENST00000554813 RIMBP2O15034 1052 aa16.69■□□□□ 0.26
APEX1-208ENST00000554813 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms