RNA–Protein interactions for RNA: ENST00000553990.1

AL390816.1-201, humanhuman

TSL 3 BASIC

Gene AL390816.1, Length 322 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390816.1-201ENST00000553990 ATP6V0A2Q9Y487 856 aa7.59□□□□□ -1.19
AL390816.1-201ENST00000553990 SPEF2Q9C093 1822 aa7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 RGL2O15211 777 aa7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 EGFRP00533 1210 aa7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 HIRAP54198 1017 aaPredicted RBP7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 DPP8Q6V1X1 898 aaPredicted RBP7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 CELF1Q92879 486 aaKnown RBP7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 FAM89AQ96GI7 184 aa7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 ZIC5Q96T25 663 aa7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 DBNDD1Q9H9R9 158 aa7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 KCNQ5Q9NR82 932 aa7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 GPRC5DQ9NZD1 345 aa7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 TRMT112Q9UI30 125 aaKnown RBP7.58□□□□□ -1.2
AL390816.1-201ENST00000553990 CELF2O95319 508 aaKnown RBP7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 DDX10Q13206 875 aaKnown RBP7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 GRAPQ13588 217 aa7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 DOK7Q18PE1 504 aa7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 PARP10Q53GL7 1025 aa7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 RBM26Q5T8P6 1007 aaKnown RBP7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 CC2D2BQ6DHV5 1058 aa7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 SAMD7Q7Z3H4 446 aa7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 MPNDQ8N594 471 aa7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 GRAPLQ8TC17 118 aaPredicted RBP7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 ABHD8Q96I13 439 aa7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 CCDC85AQ96PX6 553 aaPredicted RBP7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 BCL2L13Q9BXK5 485 aa7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 PRDM10Q9NQV6 1147 aa7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 ADARB2Q9NS39 739 aaKnown RBP7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 SCAF8Q9UPN6 1271 aaKnown RBP7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 TRIM35Q9UPQ4 493 aa7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 SCN9AQ15858 1988 aa7.57□□□□□ -1.2
AL390816.1-201ENST00000553990 ASTN2O75129 1339 aaPredicted RBP7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 ERBB4Q15303 1308 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 CCDC85CA6NKD9 419 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 ADM5C9JUS6 153 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 ELL2O00472 640 aaPredicted RBP7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 GPSM2P81274 684 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 TCIRG1Q13488 830 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 FAM161AQ3B820 660 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 TBC1D10BQ4KMP7 808 aaPredicted RBP7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 SLC10A5Q5PT55 438 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 HDGFL1Q5TGJ6 251 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 CIAPIN1Q6FI81 312 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 USP50Q70EL3 339 aaPredicted RBP7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 DDX46Q7L014 1031 aaKnown RBP7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 USP48Q86UV5 1035 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 SP8Q8IXZ3 490 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 MICALL2Q8IY33 904 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 ZNRF3Q9ULT6 936 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 TLL2Q9Y6L7 1015 aa7.56□□□□□ -1.2
AL390816.1-201ENST00000553990 SH3TC1Q8TE82 1336 aa7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 PSMD14O00487 310 aa7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 KIAA2012Q0VF49 1180 aa7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 CFAP44Q96MT7 982 aa7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 RTFDC1Q9BY42 306 aaPredicted RBP7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 PHAXQ9H814 394 aaKnown RBP7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 SEC31BQ9NQW1 1179 aa7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 POLLQ9UGP5 575 aa7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 CNOT7Q9UIV1 285 aaKnown RBP7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 NSFL1CQ9UNZ2 370 aaKnown RBP7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 RTL9Q8NET4 1388 aa7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 CASP8AP2Q9UKL3 1982 aa7.55□□□□□ -1.2
AL390816.1-201ENST00000553990 POLR2AP24928 1970 aaKnown RBP7.54□□□□□ -1.2
AL390816.1-201ENST00000553990 WTIPA6NIX2 430 aaPredicted RBP7.54□□□□□ -1.2
AL390816.1-201ENST00000553990 C6orf229H3BNL8 230 aa7.54□□□□□ -1.2
AL390816.1-201ENST00000553990 CHL1O00533 1208 aa7.54□□□□□ -1.2
AL390816.1-201ENST00000553990 SAPCD2Q86UD0 394 aa7.54□□□□□ -1.2
AL390816.1-201ENST00000553990 SUPT20HQ8NEM7 779 aa7.54□□□□□ -1.2
AL390816.1-201ENST00000553990 ISCA1Q9BUE6 129 aa7.54□□□□□ -1.2
AL390816.1-201ENST00000553990 TMX4Q9H1E5 349 aaPredicted RBP7.54□□□□□ -1.2
AL390816.1-201ENST00000553990 MBIPQ9NS73 344 aa7.54□□□□□ -1.2
AL390816.1-201ENST00000553990 ADAMTS8Q9UP79 889 aa7.54□□□□□ -1.2
AL390816.1-201ENST00000553990 MYBBP1AQ9BQG0 1328 aaKnown RBP7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 IRS4O14654 1257 aaPredicted RBP7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 ECE2O60344 883 aa7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 BBOX1O75936 387 aa7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 MAP2K1Q02750 393 aaPredicted RBP7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 LMOD3Q0VAK6 560 aa7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 WDR43Q15061 677 aaKnown RBP eCLIP7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 HSP90AB3PQ58FF7 597 aa7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 DUSP27Q5VZP5 1158 aa7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 PLBD2Q8NHP8 589 aa7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 RUNDC1Q96C34 613 aa7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 MYD88Q99836 296 aa7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 PNNQ9H307 717 aaKnown RBP7.53□□□□□ -1.2
AL390816.1-201ENST00000553990 ZNF646O15015 1829 aaPredicted RBP7.52□□□□□ -1.2
AL390816.1-201ENST00000553990 ECE1P42892 770 aa7.52□□□□□ -1.21
AL390816.1-201ENST00000553990 HUNKP57058 714 aa7.52□□□□□ -1.21
AL390816.1-201ENST00000553990 TNIP1Q15025 636 aa7.52□□□□□ -1.21
AL390816.1-201ENST00000553990 RALBP1Q15311 655 aa7.52□□□□□ -1.21
AL390816.1-201ENST00000553990 WASHC4Q2M389 1173 aa7.52□□□□□ -1.21
AL390816.1-201ENST00000553990 ANKRD13DQ6ZTN6 518 aa7.52□□□□□ -1.21
AL390816.1-201ENST00000553990 TBC1D16Q8TBP0 767 aa7.52□□□□□ -1.21
AL390816.1-201ENST00000553990 BEGAINQ9BUH8 593 aa7.52□□□□□ -1.21
AL390816.1-201ENST00000553990 MXD3Q9BW11 206 aa7.52□□□□□ -1.21
AL390816.1-201ENST00000553990 MCOLN1Q9GZU1 580 aa7.52□□□□□ -1.21
AL390816.1-201ENST00000553990 GGA3Q9NZ52 723 aa7.52□□□□□ -1.21
AL390816.1-201ENST00000553990 H7C1D1 291 aa7.51□□□□□ -1.21
AL390816.1-201ENST00000553990 UFL1O94874 794 aa7.51□□□□□ -1.21
AL390816.1-201ENST00000553990 DGKZQ13574 1117 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms