RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 WWC1Q8IX03 1113 aa14.69□□□□□ -0.06
TMEM116-218ENST00000552839 ZBTB3Q9H5J0 574 aa14.69□□□□□ -0.06
TMEM116-218ENST00000552839 ADARB2Q9NS39 739 aaKnown RBP14.69□□□□□ -0.06
TMEM116-218ENST00000552839 CELF2O95319 508 aaKnown RBP14.68□□□□□ -0.06
TMEM116-218ENST00000552839 NTSR2O95665 410 aa14.68□□□□□ -0.06
TMEM116-218ENST00000552839 MYL6BP14649 208 aa14.68□□□□□ -0.06
TMEM116-218ENST00000552839 CXCL9Q07325 125 aa14.68□□□□□ -0.06
TMEM116-218ENST00000552839 ZNF34Q8IZ26 560 aa14.68□□□□□ -0.06
TMEM116-218ENST00000552839 MCOLN1Q9GZU1 580 aa14.68□□□□□ -0.06
TMEM116-218ENST00000552839 MYH16Q9H6N6 1097 aa14.68□□□□□ -0.06
TMEM116-218ENST00000552839 EIF4A1P60842 406 aaKnown RBP14.67□□□□□ -0.06
TMEM116-218ENST00000552839 GOLGA2Q08379 1002 aa14.67□□□□□ -0.06
TMEM116-218ENST00000552839 GIGYF2Q6Y7W6 1299 aaKnown RBP14.67□□□□□ -0.06
TMEM116-218ENST00000552839 GLIS2Q9BZE0 524 aaPredicted RBP14.67□□□□□ -0.06
TMEM116-218ENST00000552839 VPS33BQ9H267 617 aa14.67□□□□□ -0.06
TMEM116-218ENST00000552839 IFT57Q9NWB7 429 aa14.67□□□□□ -0.06
TMEM116-218ENST00000552839 LAMB2P55268 1798 aa14.67□□□□□ -0.06
TMEM116-218ENST00000552839 WDR63Q8IWG1 891 aa14.66□□□□□ -0.06
TMEM116-218ENST00000552839 HHIPL1Q96JK4 782 aa14.66□□□□□ -0.06
TMEM116-218ENST00000552839 NLRP3Q96P20 1036 aa14.66□□□□□ -0.06
TMEM116-218ENST00000552839 PGAP2Q9UHJ9 254 aa14.66□□□□□ -0.06
TMEM116-218ENST00000552839 ZNRF3Q9ULT6 936 aa14.66□□□□□ -0.06
TMEM116-218ENST00000552839 ATP6V0A2Q9Y487 856 aa14.66□□□□□ -0.06
TMEM116-218ENST00000552839 IL16Q14005 1332 aa14.66□□□□□ -0.06
TMEM116-218ENST00000552839 ZBED9Q6R2W3 1325 aa14.66□□□□□ -0.06
TMEM116-218ENST00000552839 POLR2AP24928 1970 aaKnown RBP14.65□□□□□ -0.06
TMEM116-218ENST00000552839 TAF1P21675 1872 aa14.65□□□□□ -0.06
TMEM116-218ENST00000552839 CA12O43570 354 aa14.65□□□□□ -0.06
TMEM116-218ENST00000552839 GMPSP49915 693 aaPredicted RBP14.65□□□□□ -0.06
TMEM116-218ENST00000552839 HIRAP54198 1017 aaPredicted RBP14.65□□□□□ -0.06
TMEM116-218ENST00000552839 BRPF1P55201 1214 aaPredicted RBP14.65□□□□□ -0.06
TMEM116-218ENST00000552839 PPP1R42Q7Z4L9 355 aa14.65□□□□□ -0.06
TMEM116-218ENST00000552839 CFAP44Q96MT7 982 aa14.65□□□□□ -0.06
TMEM116-218ENST00000552839 RTFDC1Q9BY42 306 aaPredicted RBP14.65□□□□□ -0.06
TMEM116-218ENST00000552839 ANKRD36CQ5JPF3 1778 aa14.65□□□□□ -0.06
TMEM116-218ENST00000552839 E9PSI1 815 aa14.64□□□□□ -0.07
TMEM116-218ENST00000552839 PARP10Q53GL7 1025 aa14.64□□□□□ -0.07
TMEM116-218ENST00000552839 CIAPIN1Q6FI81 312 aa14.64□□□□□ -0.07
TMEM116-218ENST00000552839 TMX4Q9H1E5 349 aaPredicted RBP14.64□□□□□ -0.07
TMEM116-218ENST00000552839 ZNF408Q9H9D4 720 aa14.64□□□□□ -0.07
TMEM116-218ENST00000552839 BABAM1Q9NWV8 329 aa14.64□□□□□ -0.07
TMEM116-218ENST00000552839 ABCC4O15439 1325 aa14.64□□□□□ -0.07
TMEM116-218ENST00000552839 DGKZQ13574 1117 aa14.63□□□□□ -0.07
TMEM116-218ENST00000552839 SLC10A5Q5PT55 438 aa14.63□□□□□ -0.07
TMEM116-218ENST00000552839 SUPT20HQ8NEM7 779 aa14.63□□□□□ -0.07
TMEM116-218ENST00000552839 TRPM4Q8TD43 1214 aa14.63□□□□□ -0.07
TMEM116-218ENST00000552839 ZIC5Q96T25 663 aa14.63□□□□□ -0.07
TMEM116-218ENST00000552839 RAD17O75943 681 aa14.62□□□□□ -0.07
TMEM116-218ENST00000552839 KIAA2012Q0VF49 1180 aa14.62□□□□□ -0.07
TMEM116-218ENST00000552839 DPP8Q6V1X1 898 aaPredicted RBP14.62□□□□□ -0.07
TMEM116-218ENST00000552839 CDC37L1Q7L3B6 337 aa14.62□□□□□ -0.07
TMEM116-218ENST00000552839 LRP10Q7Z4F1 713 aa14.62□□□□□ -0.07
TMEM116-218ENST00000552839 SP8Q8IXZ3 490 aa14.62□□□□□ -0.07
TMEM116-218ENST00000552839 MPNDQ8N594 471 aa14.62□□□□□ -0.07
TMEM116-218ENST00000552839 ZC3H15Q8WU90 426 aaKnown RBP14.62□□□□□ -0.07
TMEM116-218ENST00000552839 UTP14AQ9BVJ6 771 aaKnown RBP14.62□□□□□ -0.07
TMEM116-218ENST00000552839 BCL2L13Q9BXK5 485 aa14.62□□□□□ -0.07
TMEM116-218ENST00000552839 CDHR2Q9BYE9 1310 aa14.62□□□□□ -0.07
TMEM116-218ENST00000552839 SHTN1A0MZ66 631 aa14.61□□□□□ -0.07
TMEM116-218ENST00000552839 TSR2Q969E8 191 aaKnown RBP14.61□□□□□ -0.07
TMEM116-218ENST00000552839 MBIPQ9NS73 344 aa14.61□□□□□ -0.07
TMEM116-218ENST00000552839 CNOT7Q9UIV1 285 aaKnown RBP14.61□□□□□ -0.07
TMEM116-218ENST00000552839 ERBB4Q15303 1308 aa14.61□□□□□ -0.07
TMEM116-218ENST00000552839 YDJCA8MPS7 323 aa14.6□□□□□ -0.07
TMEM116-218ENST00000552839 BBOX1O75936 387 aa14.6□□□□□ -0.07
TMEM116-218ENST00000552839 NOGQ13253 232 aa14.6□□□□□ -0.07
TMEM116-218ENST00000552839 TNIP1Q15025 636 aa14.6□□□□□ -0.07
TMEM116-218ENST00000552839 PDIA6Q15084 440 aa14.6□□□□□ -0.07
TMEM116-218ENST00000552839 DLK2Q6UY11 383 aa14.6□□□□□ -0.07
TMEM116-218ENST00000552839 PCDH10Q9P2E7 1040 aa14.6□□□□□ -0.07
TMEM116-218ENST00000552839 FANCIQ9NVI1 1328 aa14.6□□□□□ -0.07
TMEM116-218ENST00000552839 CHL1O00533 1208 aa14.59□□□□□ -0.07
TMEM116-218ENST00000552839 USP48Q86UV5 1035 aa14.59□□□□□ -0.07
TMEM116-218ENST00000552839 ZNF521Q96K83 1311 aa14.59□□□□□ -0.07
TMEM116-218ENST00000552839 DUOX1Q9NRD9 1551 aa14.59□□□□□ -0.07
TMEM116-218ENST00000552839 AKAP11Q9UKA4 1901 aa14.58□□□□□ -0.07
TMEM116-218ENST00000552839 ANXA1P04083 346 aa14.58□□□□□ -0.08
TMEM116-218ENST00000552839 HCLS1P14317 486 aaPredicted RBP14.58□□□□□ -0.08
TMEM116-218ENST00000552839 EIF2S2P20042 333 aaKnown RBP14.58□□□□□ -0.08
TMEM116-218ENST00000552839 HUNKP57058 714 aa14.58□□□□□ -0.08
TMEM116-218ENST00000552839 PROSER3Q2NL68 480 aa14.58□□□□□ -0.08
TMEM116-218ENST00000552839 MICALL2Q8IY33 904 aa14.58□□□□□ -0.08
TMEM116-218ENST00000552839 CHMP4AQ9BY43 222 aa14.58□□□□□ -0.08
TMEM116-218ENST00000552839 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
TMEM116-218ENST00000552839 LRRC37AA6NMS7 1700 aa14.58□□□□□ -0.08
TMEM116-218ENST00000552839 FAM155AB1AL88 458 aaPredicted RBP14.57□□□□□ -0.08
TMEM116-218ENST00000552839 H7C1D1 291 aa14.57□□□□□ -0.08
TMEM116-218ENST00000552839 GRAPQ13588 217 aa14.57□□□□□ -0.08
TMEM116-218ENST00000552839 GRAPLQ8TC17 118 aaPredicted RBP14.57□□□□□ -0.08
TMEM116-218ENST00000552839 ZNF853P0CG23 659 aa14.56□□□□□ -0.08
TMEM116-218ENST00000552839 SLFN5Q08AF3 891 aa14.56□□□□□ -0.08
TMEM116-218ENST00000552839 DDX46Q7L014 1031 aaKnown RBP14.56□□□□□ -0.08
TMEM116-218ENST00000552839 SAMD7Q7Z3H4 446 aa14.56□□□□□ -0.08
TMEM116-218ENST00000552839 NLRP10Q86W26 655 aa14.56□□□□□ -0.08
TMEM116-218ENST00000552839 DDX60Q8IY21 1712 aaKnown RBP14.55□□□□□ -0.08
TMEM116-218ENST00000552839 ELL2O00472 640 aaPredicted RBP14.55□□□□□ -0.08
TMEM116-218ENST00000552839 PSMD14O00487 310 aa14.55□□□□□ -0.08
TMEM116-218ENST00000552839 EGFRP00533 1210 aa14.55□□□□□ -0.08
TMEM116-218ENST00000552839 EXOSC9Q06265 439 aaKnown RBP14.55□□□□□ -0.08
TMEM116-218ENST00000552839 RGMBQ6NW40 437 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms