RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 FOXN1O15353 648 aa9.1□□□□□ -0.95
PRPF40B-214ENST00000551320 GTF2E1P29083 439 aaPredicted RBP9.1□□□□□ -0.95
PRPF40B-214ENST00000551320 GRM1Q13255 1194 aa9.1□□□□□ -0.95
PRPF40B-214ENST00000551320 TAF7Q15545 349 aaPredicted RBP9.1□□□□□ -0.95
PRPF40B-214ENST00000551320 PROSER3Q2NL68 480 aa9.1□□□□□ -0.95
PRPF40B-214ENST00000551320 TAF1DQ9H5J8 278 aaPredicted RBP9.1□□□□□ -0.95
PRPF40B-214ENST00000551320 NUDCQ9Y266 331 aa9.1□□□□□ -0.95
PRPF40B-214ENST00000551320 GJA3Q9Y6H8 435 aa9.1□□□□□ -0.95
PRPF40B-214ENST00000551320 NPC1L1Q9UHC9 1359 aa9.1□□□□□ -0.95
PRPF40B-214ENST00000551320 C2orf72A6NCS6 295 aa9.09□□□□□ -0.95
PRPF40B-214ENST00000551320 NPR1P16066 1061 aa9.09□□□□□ -0.95
PRPF40B-214ENST00000551320 EIF2S2P20042 333 aaKnown RBP9.09□□□□□ -0.95
PRPF40B-214ENST00000551320 VEGFBP49765 207 aa9.09□□□□□ -0.95
PRPF40B-214ENST00000551320 DSG2Q14126 1118 aa9.09□□□□□ -0.95
PRPF40B-214ENST00000551320 KRT24Q2M2I5 525 aa9.09□□□□□ -0.95
PRPF40B-214ENST00000551320 CCDC93Q567U6 631 aa9.09□□□□□ -0.95
PRPF40B-214ENST00000551320 SUSD4Q5VX71 490 aa9.09□□□□□ -0.95
PRPF40B-214ENST00000551320 DLK2Q6UY11 383 aa9.09□□□□□ -0.95
PRPF40B-214ENST00000551320 DICER1Q9UPY3 1922 aaKnown RBP9.08□□□□□ -0.96
PRPF40B-214ENST00000551320 TRAF5O00463 557 aa9.08□□□□□ -0.96
PRPF40B-214ENST00000551320 ITGBL1O95965 494 aaPredicted RBP9.08□□□□□ -0.96
PRPF40B-214ENST00000551320 EIF4A1P60842 406 aaKnown RBP9.08□□□□□ -0.96
PRPF40B-214ENST00000551320 FKBP4Q02790 459 aaKnown RBP eCLIP9.08□□□□□ -0.96
PRPF40B-214ENST00000551320 TMEM92Q6UXU6 159 aa9.08□□□□□ -0.96
PRPF40B-214ENST00000551320 TPTE2Q6XPS3 522 aa9.08□□□□□ -0.96
PRPF40B-214ENST00000551320 LTBP3Q9NS15 1303 aa9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 ZC3H4Q9UPT8 1303 aaKnown RBP9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 SHTN1A0MZ66 631 aa9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 EPHX2P34913 555 aa9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 IARSP41252 1262 aaKnown RBP9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 EPS15P42566 896 aa9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 FOXK1P85037 733 aa9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 NEUROD2Q15784 382 aa9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 CCDC146Q8IYE0 955 aa9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 PLEKHF1Q96S99 279 aa9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 TSKSQ9UJT2 592 aa9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 DLG5Q8TDM6 1919 aa9.07□□□□□ -0.96
PRPF40B-214ENST00000551320 PASKQ96RG2 1323 aa9.06□□□□□ -0.96
PRPF40B-214ENST00000551320 KLRG2A4D1S0 409 aaPredicted RBP9.06□□□□□ -0.96
PRPF40B-214ENST00000551320 HCLS1P14317 486 aaPredicted RBP9.06□□□□□ -0.96
PRPF40B-214ENST00000551320 AIMP1Q12904 312 aaKnown RBP9.06□□□□□ -0.96
PRPF40B-214ENST00000551320 CAMK2BQ13554 666 aa9.06□□□□□ -0.96
PRPF40B-214ENST00000551320 CLEC4GQ6UXB4 293 aa9.06□□□□□ -0.96
PRPF40B-214ENST00000551320 HACL1Q9UJ83 578 aa9.06□□□□□ -0.96
PRPF40B-214ENST00000551320 ZNF652Q9Y2D9 606 aa9.06□□□□□ -0.96
PRPF40B-214ENST00000551320 MAP3K15Q6ZN16 1313 aa9.05□□□□□ -0.96
PRPF40B-214ENST00000551320 LTBP1Q14766 1721 aa9.05□□□□□ -0.96
PRPF40B-214ENST00000551320 LBX1P52954 281 aa9.05□□□□□ -0.96
PRPF40B-214ENST00000551320 PDIA6Q15084 440 aa9.05□□□□□ -0.96
PRPF40B-214ENST00000551320 NFE2L2Q16236 605 aa9.05□□□□□ -0.96
PRPF40B-214ENST00000551320 AOC3Q16853 763 aa9.05□□□□□ -0.96
PRPF40B-214ENST00000551320 LDHDQ86WU2 507 aa9.05□□□□□ -0.96
PRPF40B-214ENST00000551320 CNTROBQ8N137 903 aa9.05□□□□□ -0.96
PRPF40B-214ENST00000551320 RPGRQ92834 1020 aaKnown RBP9.05□□□□□ -0.96
PRPF40B-214ENST00000551320 CNTNAP1P78357 1384 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 NUP98P52948 1817 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 TMEM88BA6NKF7 163 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 FZD9O00144 591 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 NTSR2O95665 410 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 RTL5Q5HYW3 569 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 KIF6Q6ZMV9 814 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 PLPP6Q8IY26 295 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 LARGE2Q8N3Y3 721 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 GPR101Q96P66 508 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 TSPYL4Q9UJ04 414 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 PDZRN3Q9UPQ7 1066 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 LAS1LQ9Y4W2 734 aaKnown RBP9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 TAF1P21675 1872 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 SNED1Q8TER0 1413 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 ARFGEF2Q9Y6D5 1785 aa9.04□□□□□ -0.96
PRPF40B-214ENST00000551320 IQCA1LA6NCM1 817 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 PPEF1O14829 653 aaPredicted RBP9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 AOC2O75106 756 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 SCNN1DP51172 638 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 RIPK4P57078 832 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 CRY2Q49AN0 593 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 SOGA3Q5TF21 947 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 CYP4F22Q6NT55 531 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 LRP10Q7Z4F1 713 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 ZNF34Q8IZ26 560 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 RTKN2Q8IZC4 609 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 JARID2Q92833 1246 aaPredicted RBP9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 ABT1Q9ULW3 272 aaKnown RBP9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 KDM3BQ7LBC6 1761 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 COL4A1P02462 1669 aa9.03□□□□□ -0.96
PRPF40B-214ENST00000551320 HTATSF1O43719 755 aaKnown RBP9.02□□□□□ -0.97
PRPF40B-214ENST00000551320 RAD17O75943 681 aa9.02□□□□□ -0.97
PRPF40B-214ENST00000551320 ALDH1B1P30837 517 aa9.02□□□□□ -0.97
PRPF40B-214ENST00000551320 CST9Q5W186 159 aa9.02□□□□□ -0.97
PRPF40B-214ENST00000551320 COPS6Q7L5N1 327 aa9.02□□□□□ -0.97
PRPF40B-214ENST00000551320 XAGE3Q8WTP9 111 aa9.02□□□□□ -0.97
PRPF40B-214ENST00000551320 JDP2Q8WYK2 163 aa9.02□□□□□ -0.97
PRPF40B-214ENST00000551320 ERVV-1B6SEH8 477 aa9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 ATP5J2-PTCD1G3V325 749 aa9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 PPIP5K2O43314 1243 aa9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 EIF6P56537 245 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 DEFB115Q30KQ5 88 aa9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 GIGYF2Q6Y7W6 1299 aaKnown RBP9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 GPC2Q8N158 579 aa9.01□□□□□ -0.97
PRPF40B-214ENST00000551320 ZIC5Q96T25 663 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms