RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 IL17REQ8NFR9 667 aa18.45■□□□□ 0.54
SNRPF-203ENST00000551316 SPTBN5Q9NRC6 3674 aaKnown RBP18.45■□□□□ 0.54
SNRPF-203ENST00000551316 KIF7Q2M1P5 1343 aa18.45■□□□□ 0.54
SNRPF-203ENST00000551316 RPGRQ92834 1020 aaKnown RBP18.44■□□□□ 0.54
SNRPF-203ENST00000551316 TEX13AQ9BXU3 409 aaPredicted RBP18.44■□□□□ 0.54
SNRPF-203ENST00000551316 ZNF652Q9Y2D9 606 aa18.44■□□□□ 0.54
SNRPF-203ENST00000551316 VCANP13611 3396 aa18.44■□□□□ 0.54
SNRPF-203ENST00000551316 LAMB1P07942 1786 aa18.43■□□□□ 0.54
SNRPF-203ENST00000551316 ANKRD36CQ5JPF3 1778 aa18.43■□□□□ 0.54
SNRPF-203ENST00000551316 CDCA5Q96FF9 252 aa18.43■□□□□ 0.54
SNRPF-203ENST00000551316 FMNL2Q96PY5 1086 aa18.43■□□□□ 0.54
SNRPF-203ENST00000551316 UBN2Q6ZU65 1347 aa18.43■□□□□ 0.54
SNRPF-203ENST00000551316 H0YGN5 161 aa18.42■□□□□ 0.54
SNRPF-203ENST00000551316 CDCA8Q53HL2 280 aa18.42■□□□□ 0.54
SNRPF-203ENST00000551316 RTFDC1Q9BY42 306 aaPredicted RBP18.42■□□□□ 0.54
SNRPF-203ENST00000551316 NPM2Q86SE8 214 aaKnown RBP18.41■□□□□ 0.54
SNRPF-203ENST00000551316 GGA3Q9NZ52 723 aa18.41■□□□□ 0.54
SNRPF-203ENST00000551316 GTF2E1P29083 439 aaPredicted RBP18.4■□□□□ 0.54
SNRPF-203ENST00000551316 KIAA2012Q0VF49 1180 aa18.4■□□□□ 0.54
SNRPF-203ENST00000551316 CHRDL2Q6WN34 429 aa18.4■□□□□ 0.54
SNRPF-203ENST00000551316 CRAMP1Q96RY5 1269 aa18.4■□□□□ 0.54
SNRPF-203ENST00000551316 CAP1Q01518 475 aa18.39■□□□□ 0.53
SNRPF-203ENST00000551316 MKRN3Q13064 507 aaKnown RBP18.39■□□□□ 0.53
SNRPF-203ENST00000551316 RBM26Q5T8P6 1007 aaKnown RBP18.39■□□□□ 0.53
SNRPF-203ENST00000551316 RBM27Q9P2N5 1060 aaKnown RBP18.39■□□□□ 0.53
SNRPF-203ENST00000551316 SCAF8Q9UPN6 1271 aaKnown RBP18.39■□□□□ 0.53
SNRPF-203ENST00000551316 ATP6V0A2Q9Y487 856 aa18.39■□□□□ 0.53
SNRPF-203ENST00000551316 ABCC4O15439 1325 aa18.39■□□□□ 0.53
SNRPF-203ENST00000551316 ZSWIM8A7E2V4 1837 aa18.38■□□□□ 0.53
SNRPF-203ENST00000551316 PSME4Q14997 1843 aa18.38■□□□□ 0.53
SNRPF-203ENST00000551316 H7C1D1 291 aa18.38■□□□□ 0.53
SNRPF-203ENST00000551316 PSMD14O00487 310 aa18.38■□□□□ 0.53
SNRPF-203ENST00000551316 TEFQ10587 303 aa18.38■□□□□ 0.53
SNRPF-203ENST00000551316 RTL9Q8NET4 1388 aa18.38■□□□□ 0.53
SNRPF-203ENST00000551316 CEMIPQ8WUJ3 1361 aa18.38■□□□□ 0.53
SNRPF-203ENST00000551316 FKTNO75072 461 aa18.37■□□□□ 0.53
SNRPF-203ENST00000551316 GRIPAP1Q4V328 841 aa18.37■□□□□ 0.53
SNRPF-203ENST00000551316 NOM1Q5C9Z4 860 aaKnown RBP18.37■□□□□ 0.53
SNRPF-203ENST00000551316 OTOP1Q7RTM1 612 aa18.37■□□□□ 0.53
SNRPF-203ENST00000551316 ZNF609O15014 1411 aa18.37■□□□□ 0.53
SNRPF-203ENST00000551316 GPTP24298 496 aa18.36■□□□□ 0.53
SNRPF-203ENST00000551316 TNIP1Q15025 636 aa18.36■□□□□ 0.53
SNRPF-203ENST00000551316 DCPSQ96C86 337 aaKnown RBP18.36■□□□□ 0.53
SNRPF-203ENST00000551316 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
SNRPF-203ENST00000551316 KCNQ5Q9NR82 932 aa18.36■□□□□ 0.53
SNRPF-203ENST00000551316 TRIM17Q9Y577 477 aa18.36■□□□□ 0.53
SNRPF-203ENST00000551316 ZNF646O15015 1829 aaPredicted RBP18.35■□□□□ 0.53
SNRPF-203ENST00000551316 IBTKQ9P2D0 1353 aaPredicted RBP18.35■□□□□ 0.53
SNRPF-203ENST00000551316 SUSD4Q5VX71 490 aa18.35■□□□□ 0.53
SNRPF-203ENST00000551316 REM2Q8IYK8 340 aaPredicted RBP18.35■□□□□ 0.53
SNRPF-203ENST00000551316 VPS33BQ9H267 617 aa18.35■□□□□ 0.53
SNRPF-203ENST00000551316 NTSR2O95665 410 aa18.34■□□□□ 0.53
SNRPF-203ENST00000551316 DPP8Q6V1X1 898 aaPredicted RBP18.34■□□□□ 0.53
SNRPF-203ENST00000551316 COL3A1P02461 1466 aaPredicted RBP18.33■□□□□ 0.53
SNRPF-203ENST00000551316 UBE2Q2LH0YL09 131 aa18.33■□□□□ 0.52
SNRPF-203ENST00000551316 SOX1O00570 391 aaPredicted RBP18.33■□□□□ 0.52
SNRPF-203ENST00000551316 RGL2O15211 777 aa18.33■□□□□ 0.52
SNRPF-203ENST00000551316 TM4SF4P48230 202 aa18.33■□□□□ 0.52
SNRPF-203ENST00000551316 KIF4BQ2VIQ3 1234 aa18.33■□□□□ 0.52
SNRPF-203ENST00000551316 DPF2Q92785 391 aa18.33■□□□□ 0.52
SNRPF-203ENST00000551316 POLR3GLQ9BT43 218 aa18.33■□□□□ 0.52
SNRPF-203ENST00000551316 DBNDD1Q9H9R9 158 aa18.33■□□□□ 0.52
SNRPF-203ENST00000551316 PITPNM2Q9BZ72 1349 aa18.32■□□□□ 0.52
SNRPF-203ENST00000551316 CFHR5Q9BXR6 569 aa18.32■□□□□ 0.52
SNRPF-203ENST00000551316 NYXQ9GZU5 481 aa18.32■□□□□ 0.52
SNRPF-203ENST00000551316 MNX1P50219 401 aaPredicted RBP18.31■□□□□ 0.52
SNRPF-203ENST00000551316 INTS3Q68E01 1043 aaKnown RBP18.31■□□□□ 0.52
SNRPF-203ENST00000551316 MORC1Q86VD1 984 aa18.31■□□□□ 0.52
SNRPF-203ENST00000551316 SULF1Q8IWU6 871 aa18.31■□□□□ 0.52
SNRPF-203ENST00000551316 SUPT20HQ8NEM7 779 aa18.31■□□□□ 0.52
SNRPF-203ENST00000551316 ARMC5Q96C12 935 aa18.31■□□□□ 0.52
SNRPF-203ENST00000551316 EYSQ5T1H1 3165 aa18.31■□□□□ 0.52
SNRPF-203ENST00000551316 BTBD11A6QL63 1104 aa18.3■□□□□ 0.52
SNRPF-203ENST00000551316 ANGEL2Q5VTE6 544 aaKnown RBP18.3■□□□□ 0.52
SNRPF-203ENST00000551316 PRAMEF18Q5VWM3 479 aa18.3■□□□□ 0.52
SNRPF-203ENST00000551316 TTLL7Q6ZT98 887 aa18.3■□□□□ 0.52
SNRPF-203ENST00000551316 MPNDQ8N594 471 aa18.3■□□□□ 0.52
SNRPF-203ENST00000551316 PRO3102Q9H379 93 aa18.3■□□□□ 0.52
SNRPF-203ENST00000551316 GNAT3A8MTJ3 354 aa18.29■□□□□ 0.52
SNRPF-203ENST00000551316 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
SNRPF-203ENST00000551316 PTPN22Q9Y2R2 807 aa18.29■□□□□ 0.52
SNRPF-203ENST00000551316 LRCH3Q96II8 777 aa18.28■□□□□ 0.52
SNRPF-203ENST00000551316 COL25A1Q9BXS0 654 aaPredicted RBP18.28■□□□□ 0.52
SNRPF-203ENST00000551316 PANK3Q9H999 370 aa18.28■□□□□ 0.52
SNRPF-203ENST00000551316 CD99L2Q8TCZ2 262 aa18.27■□□□□ 0.52
SNRPF-203ENST00000551316 MAP3K15Q6ZN16 1313 aa18.26■□□□□ 0.51
SNRPF-203ENST00000551316 SNRPA1P09661 255 aaKnown RBP18.26■□□□□ 0.51
SNRPF-203ENST00000551316 SP8Q8IXZ3 490 aa18.26■□□□□ 0.51
SNRPF-203ENST00000551316 ZBTB3Q9H5J0 574 aa18.26■□□□□ 0.51
SNRPF-203ENST00000551316 FKBP1BP68106 108 aa18.25■□□□□ 0.51
SNRPF-203ENST00000551316 ZNF333Q96JL9 665 aa18.25■□□□□ 0.51
SNRPF-203ENST00000551316 ZNF34Q8IZ26 560 aa18.24■□□□□ 0.51
SNRPF-203ENST00000551316 RIMBP2O15034 1052 aa18.23■□□□□ 0.51
SNRPF-203ENST00000551316 ECE2O60344 883 aa18.23■□□□□ 0.51
SNRPF-203ENST00000551316 MYCP01106 439 aaPredicted RBP18.23■□□□□ 0.51
SNRPF-203ENST00000551316 SCARF1Q14162 830 aa18.23■□□□□ 0.51
SNRPF-203ENST00000551316 DOK7Q18PE1 504 aa18.23■□□□□ 0.51
SNRPF-203ENST00000551316 ALPK3Q96L96 1907 aa18.22■□□□□ 0.51
SNRPF-203ENST00000551316 IGF2BP3O00425 579 aaKnown RBP eCLIP18.22■□□□□ 0.51
SNRPF-203ENST00000551316 RPS12P25398 132 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms