RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 BBOX1O75936 387 aa22■■□□□ 1.11
CHMP1A-208ENST00000550102 DNAAF4Q8WXU2 420 aa22■■□□□ 1.11
CHMP1A-208ENST00000550102 CDHR2Q9BYE9 1310 aa22■■□□□ 1.11
CHMP1A-208ENST00000550102 NEURL1BA8MQ27 555 aa21.99■■□□□ 1.11
CHMP1A-208ENST00000550102 IARSP41252 1262 aaKnown RBP21.99■■□□□ 1.11
CHMP1A-208ENST00000550102 SLFN5Q08AF3 891 aa21.99■■□□□ 1.11
CHMP1A-208ENST00000550102 CWF19L2Q2TBE0 894 aaKnown RBP21.99■■□□□ 1.11
CHMP1A-208ENST00000550102 TMC4Q7Z404 712 aa21.99■■□□□ 1.11
CHMP1A-208ENST00000550102 LTBP1Q14766 1721 aa21.99■■□□□ 1.11
CHMP1A-208ENST00000550102 SLC51AQ86UW1 340 aa21.98■■□□□ 1.11
CHMP1A-208ENST00000550102 DUOX1Q9NRD9 1551 aa21.98■■□□□ 1.11
CHMP1A-208ENST00000550102 SCN4AP35499 1836 aa21.97■■□□□ 1.11
CHMP1A-208ENST00000550102 PDE8AO60658 829 aa21.97■■□□□ 1.11
CHMP1A-208ENST00000550102 DPY19L2Q6NUT2 758 aa21.97■■□□□ 1.11
CHMP1A-208ENST00000550102 LINS1Q8NG48 757 aa21.97■■□□□ 1.11
CHMP1A-208ENST00000550102 COL4A5P29400 1685 aa21.97■■□□□ 1.11
CHMP1A-208ENST00000550102 CCDC152Q4G0S7 254 aa21.96■■□□□ 1.11
CHMP1A-208ENST00000550102 SP8Q8IXZ3 490 aa21.95■■□□□ 1.1
CHMP1A-208ENST00000550102 C16orf71Q8IYS4 520 aaPredicted RBP21.95■■□□□ 1.1
CHMP1A-208ENST00000550102 JARID2Q92833 1246 aaPredicted RBP21.95■■□□□ 1.1
CHMP1A-208ENST00000550102 CDCA7LQ96GN5 454 aa21.95■■□□□ 1.1
CHMP1A-208ENST00000550102 GCKRQ14397 625 aa21.94■■□□□ 1.1
CHMP1A-208ENST00000550102 DPP8Q6V1X1 898 aaPredicted RBP21.94■■□□□ 1.1
CHMP1A-208ENST00000550102 UBE3BQ7Z3V4 1068 aa21.94■■□□□ 1.1
CHMP1A-208ENST00000550102 SUPT20HQ8NEM7 779 aa21.94■■□□□ 1.1
CHMP1A-208ENST00000550102 RRAGCQ9HB90 399 aa21.94■■□□□ 1.1
CHMP1A-208ENST00000550102 TOMM70O94826 608 aa21.93■■□□□ 1.1
CHMP1A-208ENST00000550102 CTSWP56202 376 aa21.93■■□□□ 1.1
CHMP1A-208ENST00000550102 JDP2Q8WYK2 163 aa21.93■■□□□ 1.1
CHMP1A-208ENST00000550102 CELF1Q92879 486 aaKnown RBP21.93■■□□□ 1.1
CHMP1A-208ENST00000550102 ZNF541Q9H0D2 1346 aa21.92■■□□□ 1.1
CHMP1A-208ENST00000550102 F6X3S4 739 aa21.92■■□□□ 1.1
CHMP1A-208ENST00000550102 LARGE2Q8N3Y3 721 aa21.92■■□□□ 1.1
CHMP1A-208ENST00000550102 MPNDQ8N594 471 aa21.92■■□□□ 1.1
CHMP1A-208ENST00000550102 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
CHMP1A-208ENST00000550102 VEGFAP15692 232 aaPredicted RBP21.91■■□□□ 1.1
CHMP1A-208ENST00000550102 TRMT2AQ8IZ69 625 aaKnown RBP21.91■■□□□ 1.1
CHMP1A-208ENST00000550102 RTFDC1Q9BY42 306 aaPredicted RBP21.91■■□□□ 1.1
CHMP1A-208ENST00000550102 H7C1W4 665 aa21.9■■□□□ 1.1
CHMP1A-208ENST00000550102 PPIP5K2O43314 1243 aa21.9■■□□□ 1.1
CHMP1A-208ENST00000550102 RPS8P62241 208 aaKnown RBP21.9■■□□□ 1.1
CHMP1A-208ENST00000550102 VPS33BQ9H267 617 aa21.9■■□□□ 1.1
CHMP1A-208ENST00000550102 FZD9O00144 591 aa21.89■■□□□ 1.09
CHMP1A-208ENST00000550102 DDNO94850 711 aaPredicted RBP21.89■■□□□ 1.09
CHMP1A-208ENST00000550102 AOC3Q16853 763 aa21.89■■□□□ 1.09
CHMP1A-208ENST00000550102 BEND3Q5T5X7 828 aa21.89■■□□□ 1.09
CHMP1A-208ENST00000550102 NIM1KQ8IY84 436 aa21.89■■□□□ 1.09
CHMP1A-208ENST00000550102 MRPL50Q8N5N7 158 aaKnown RBP21.89■■□□□ 1.09
CHMP1A-208ENST00000550102 RBM46Q8TBY0 533 aaKnown RBP21.89■■□□□ 1.09
CHMP1A-208ENST00000550102 CCDC85AQ96PX6 553 aaPredicted RBP21.89■■□□□ 1.09
CHMP1A-208ENST00000550102 SEC31BQ9NQW1 1179 aa21.89■■□□□ 1.09
CHMP1A-208ENST00000550102 PTPRCP08575 1304 aa21.88■■□□□ 1.09
CHMP1A-208ENST00000550102 CT47B1P0C2W7 299 aaPredicted RBP21.88■■□□□ 1.09
CHMP1A-208ENST00000550102 SSH1Q8WYL5 1049 aa21.88■■□□□ 1.09
CHMP1A-208ENST00000550102 L3MBTL3Q96JM7 780 aaPredicted RBP21.88■■□□□ 1.09
CHMP1A-208ENST00000550102 CDC5LQ99459 802 aaKnown RBP21.88■■□□□ 1.09
CHMP1A-208ENST00000550102 A0A1B0GUL6 1792 aa21.87■■□□□ 1.09
CHMP1A-208ENST00000550102 CASP7P55210 303 aa21.87■■□□□ 1.09
CHMP1A-208ENST00000550102 ALDH1L2Q3SY69 923 aa21.87■■□□□ 1.09
CHMP1A-208ENST00000550102 SLC4A10Q6U841 1118 aa21.87■■□□□ 1.09
CHMP1A-208ENST00000550102 ANKRD18AQ8IVF6 992 aa21.87■■□□□ 1.09
CHMP1A-208ENST00000550102 TTLL11Q8NHH1 800 aa21.87■■□□□ 1.09
CHMP1A-208ENST00000550102 PLA2G12BQ9BX93 195 aa21.87■■□□□ 1.09
CHMP1A-208ENST00000550102 EIF6P56537 245 aaKnown RBP21.86■■□□□ 1.09
CHMP1A-208ENST00000550102 KIAA2012Q0VF49 1180 aa21.86■■□□□ 1.09
CHMP1A-208ENST00000550102 BCL2L13Q9BXK5 485 aa21.86■■□□□ 1.09
CHMP1A-208ENST00000550102 SMC4Q9NTJ3 1288 aa21.86■■□□□ 1.09
CHMP1A-208ENST00000550102 NSFL1CQ9UNZ2 370 aaKnown RBP21.86■■□□□ 1.09
CHMP1A-208ENST00000550102 IQCA1LA6NCM1 817 aa21.85■■□□□ 1.09
CHMP1A-208ENST00000550102 ALDH1L1O75891 902 aa21.85■■□□□ 1.09
CHMP1A-208ENST00000550102 HNRNPUQ00839 825 aaKnown RBP eCLIP21.85■■□□□ 1.09
CHMP1A-208ENST00000550102 GPC2Q8N158 579 aa21.85■■□□□ 1.09
CHMP1A-208ENST00000550102 SRCIN1Q9C0H9 1055 aa21.85■■□□□ 1.09
CHMP1A-208ENST00000550102 GREM2Q9H772 168 aa21.85■■□□□ 1.09
CHMP1A-208ENST00000550102 POTECB2RU33 542 aa21.84■■□□□ 1.09
CHMP1A-208ENST00000550102 GRM8O00222 908 aa21.84■■□□□ 1.09
CHMP1A-208ENST00000550102 HSPA6P17066 643 aa21.84■■□□□ 1.09
CHMP1A-208ENST00000550102 GPSM2P81274 684 aa21.84■■□□□ 1.09
CHMP1A-208ENST00000550102 PSME4Q14997 1843 aa21.83■■□□□ 1.09
CHMP1A-208ENST00000550102 FSTL1Q12841 308 aa21.83■■□□□ 1.09
CHMP1A-208ENST00000550102 SMC1BQ8NDV3 1235 aa21.83■■□□□ 1.09
CHMP1A-208ENST00000550102 ADAMTSL1Q8N6G6 1762 aa21.82■■□□□ 1.08
CHMP1A-208ENST00000550102 C6orf229H3BNL8 230 aa21.82■■□□□ 1.08
CHMP1A-208ENST00000550102 FAM161AQ3B820 660 aa21.82■■□□□ 1.08
CHMP1A-208ENST00000550102 PODXL2Q9NZ53 605 aa21.82■■□□□ 1.08
CHMP1A-208ENST00000550102 C9orf78Q9NZ63 289 aaPredicted RBP21.82■■□□□ 1.08
CHMP1A-208ENST00000550102 ANKIB1Q9P2G1 1089 aa21.82■■□□□ 1.08
CHMP1A-208ENST00000550102 ZNRF3Q9ULT6 936 aa21.82■■□□□ 1.08
CHMP1A-208ENST00000550102 CEP350Q5VT06 3117 aa21.81■■□□□ 1.08
CHMP1A-208ENST00000550102 WASHC4Q2M389 1173 aa21.81■■□□□ 1.08
CHMP1A-208ENST00000550102 EYA3Q99504 573 aa21.81■■□□□ 1.08
CHMP1A-208ENST00000550102 GJA3Q9Y6H8 435 aa21.81■■□□□ 1.08
CHMP1A-208ENST00000550102 XDHP47989 1333 aa21.8■■□□□ 1.08
CHMP1A-208ENST00000550102 UFL1O94874 794 aa21.8■■□□□ 1.08
CHMP1A-208ENST00000550102 ITGA6P23229 1130 aa21.8■■□□□ 1.08
CHMP1A-208ENST00000550102 TBC1D16Q8TBP0 767 aa21.8■■□□□ 1.08
CHMP1A-208ENST00000550102 POLLQ9UGP5 575 aa21.8■■□□□ 1.08
CHMP1A-208ENST00000550102 HACL1Q9UJ83 578 aa21.8■■□□□ 1.08
CHMP1A-208ENST00000550102 SCN9AQ15858 1988 aa21.79■■□□□ 1.08
CHMP1A-208ENST00000550102 CSF1RP07333 972 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms