RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 GIGYF1O75420 1035 aaPredicted RBP12.22□□□□□ -0.45
ERBB3-214ENST00000550070 KRT85P78386 507 aa12.22□□□□□ -0.45
ERBB3-214ENST00000550070 CAMK4Q16566 473 aa12.22□□□□□ -0.45
ERBB3-214ENST00000550070 RNMTO43148 476 aaKnown RBP12.22□□□□□ -0.45
ERBB3-214ENST00000550070 ZNF622Q969S3 477 aaKnown RBP eCLIP12.22□□□□□ -0.45
ERBB3-214ENST00000550070 BICC1Q9H694 974 aaKnown RBP12.22□□□□□ -0.45
ERBB3-214ENST00000550070 NFAT5O94916 1531 aa12.21□□□□□ -0.45
ERBB3-214ENST00000550070 MAFGO15525 162 aa12.21□□□□□ -0.45
ERBB3-214ENST00000550070 PSMA5P28066 241 aa12.21□□□□□ -0.45
ERBB3-214ENST00000550070 BOLA2Q9H3K6 86 aa12.21□□□□□ -0.45
ERBB3-214ENST00000550070 SNRKQ9NRH2 765 aa12.21□□□□□ -0.45
ERBB3-214ENST00000550070 MRVI1Q9Y6F6 885 aa12.21□□□□□ -0.45
ERBB3-214ENST00000550070 NPHP4O75161 1426 aaPredicted RBP12.21□□□□□ -0.45
ERBB3-214ENST00000550070 TOB2Q14106 344 aaPredicted RBP12.21□□□□□ -0.46
ERBB3-214ENST00000550070 PLEKHO1Q53GL0 409 aaPredicted RBP12.21□□□□□ -0.46
ERBB3-214ENST00000550070 NUP62CLQ9H1M0 184 aa12.21□□□□□ -0.46
ERBB3-214ENST00000550070 PHF8Q9UPP1 1060 aa12.21□□□□□ -0.46
ERBB3-214ENST00000550070 ELP1O95163 1332 aa12.21□□□□□ -0.46
ERBB3-214ENST00000550070 GRM8O00222 908 aa12.2□□□□□ -0.46
ERBB3-214ENST00000550070 HIP1O00291 1037 aa12.2□□□□□ -0.46
ERBB3-214ENST00000550070 TYRO3Q06418 890 aa12.2□□□□□ -0.46
ERBB3-214ENST00000550070 G3BP1Q13283 466 aaKnown RBP eCLIP12.2□□□□□ -0.463e-7■■□□□ 14.5
ERBB3-214ENST00000550070 MAP3K11Q16584 847 aa12.2□□□□□ -0.46
ERBB3-214ENST00000550070 BLOC1S2Q6QNY1 142 aa12.2□□□□□ -0.46
ERBB3-214ENST00000550070 FAM200AQ8TCP9 573 aa12.2□□□□□ -0.46
ERBB3-214ENST00000550070 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
ERBB3-214ENST00000550070 HEG1Q9ULI3 1381 aa12.2□□□□□ -0.46
ERBB3-214ENST00000550070 PXDNQ92626 1479 aa12.2□□□□□ -0.46
ERBB3-214ENST00000550070 RPS6KB1P23443 525 aa12.2□□□□□ -0.46
ERBB3-214ENST00000550070 LARP1Q6PKG0 1096 aaKnown RBP12.2□□□□□ -0.46
ERBB3-214ENST00000550070 LUZP1Q86V48 1076 aa12.2□□□□□ -0.46
ERBB3-214ENST00000550070 THEMISQ8N1K5 641 aaPredicted RBP12.2□□□□□ -0.46
ERBB3-214ENST00000550070 CCDC94Q9BW85 323 aaPredicted RBP12.2□□□□□ -0.46
ERBB3-214ENST00000550070 SIL1Q9H173 461 aa12.2□□□□□ -0.46
ERBB3-214ENST00000550070 ZNF589Q86UQ0 364 aaPredicted RBP12.19□□□□□ -0.46
ERBB3-214ENST00000550070 CKAP2LQ8IYA6 745 aa12.19□□□□□ -0.46
ERBB3-214ENST00000550070 LINS1Q8NG48 757 aa12.19□□□□□ -0.46
ERBB3-214ENST00000550070 FSD1Q9BTV5 496 aa12.19□□□□□ -0.46
ERBB3-214ENST00000550070 DACT1Q9NYF0 836 aa12.19□□□□□ -0.46
ERBB3-214ENST00000550070 KIF3AQ9Y496 699 aa12.19□□□□□ -0.46
ERBB3-214ENST00000550070 UTYO14607 1347 aa12.19□□□□□ -0.46
ERBB3-214ENST00000550070 TPM3P06753 285 aa12.19□□□□□ -0.46
ERBB3-214ENST00000550070 PDCP20941 246 aa12.19□□□□□ -0.46
ERBB3-214ENST00000550070 AIMP1Q12904 312 aaKnown RBP12.19□□□□□ -0.46
ERBB3-214ENST00000550070 STK3Q13188 491 aa12.19□□□□□ -0.46
ERBB3-214ENST00000550070 KLHDC4Q8TBB5 520 aa12.19□□□□□ -0.46
ERBB3-214ENST00000550070 HDAC5Q9UQL6 1122 aa12.19□□□□□ -0.46
ERBB3-214ENST00000550070 PTGS1P23219 599 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 ANKRD1Q15327 319 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 ALDH8A1Q9H2A2 487 aaPredicted RBP12.18□□□□□ -0.46
ERBB3-214ENST00000550070 MED23Q9ULK4 1368 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 GOLGA6L6A8MZA4 724 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 MMP14P50281 582 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 ANO6Q4KMQ2 910 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 C1orf141Q5JVX7 400 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 RNF20Q5VTR2 975 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 EDC3Q96F86 508 aaKnown RBP12.18□□□□□ -0.46
ERBB3-214ENST00000550070 SPATA32Q96LK8 384 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 TNMDQ9H2S6 317 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 CBX8Q9HC52 389 aa12.18□□□□□ -0.46
ERBB3-214ENST00000550070 RAD21O60216 631 aa12.17□□□□□ -0.46
ERBB3-214ENST00000550070 AMOTQ4VCS5 1084 aa12.17□□□□□ -0.46
ERBB3-214ENST00000550070 LEO1Q8WVC0 666 aaPredicted RBP12.17□□□□□ -0.46
ERBB3-214ENST00000550070 SCAND2PQ9GZW5 306 aaPredicted RBP12.17□□□□□ -0.46
ERBB3-214ENST00000550070 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
ERBB3-214ENST00000550070 IGKV5-2P06315 115 aa12.17□□□□□ -0.46
ERBB3-214ENST00000550070 PDIA6Q15084 440 aa12.17□□□□□ -0.46
ERBB3-214ENST00000550070 SMAP1Q8IYB5 467 aaPredicted RBP12.17□□□□□ -0.46
ERBB3-214ENST00000550070 JCADQ9P266 1359 aa12.17□□□□□ -0.46
ERBB3-214ENST00000550070 TSGA10IPQ3SY00 556 aa12.17□□□□□ -0.46
ERBB3-214ENST00000550070 PGBD1Q96JS3 809 aa12.17□□□□□ -0.46
ERBB3-214ENST00000550070 ADGRL3Q9HAR2 1447 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 NPHP3Q7Z494 1330 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 GOLGA6L4A6NEF3 574 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 JAK2O60674 1132 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 NR1I2O75469 434 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 TAF5LO75529 589 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 RBM43Q6ZSC3 357 aaKnown RBP12.16□□□□□ -0.46
ERBB3-214ENST00000550070 KCNH5Q8NCM2 988 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 NRBP1Q9UHY1 535 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 COL15A1P39059 1388 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 PSME1Q06323 249 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 CCDC186Q7Z3E2 898 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 CLSTN2Q9H4D0 955 aa12.16□□□□□ -0.46
ERBB3-214ENST00000550070 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.46
ERBB3-214ENST00000550070 NCAPD2Q15021 1401 aa12.15□□□□□ -0.46
ERBB3-214ENST00000550070 DDX58O95786 925 aaKnown RBP12.15□□□□□ -0.46
ERBB3-214ENST00000550070 EPHA10Q5JZY3 1008 aa12.15□□□□□ -0.46
ERBB3-214ENST00000550070 DDX19AQ9NUU7 478 aaKnown RBP12.15□□□□□ -0.46
ERBB3-214ENST00000550070 HMG20BQ9P0W2 317 aa12.15□□□□□ -0.46
ERBB3-214ENST00000550070 CHGBP05060 677 aa12.15□□□□□ -0.47
ERBB3-214ENST00000550070 LRMPQ12912 555 aa12.15□□□□□ -0.47
ERBB3-214ENST00000550070 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.47
ERBB3-214ENST00000550070 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.47
ERBB3-214ENST00000550070 SIPA1L3O60292 1781 aaPredicted RBP12.15□□□□□ -0.47
ERBB3-214ENST00000550070 ESCO1Q5FWF5 840 aa12.14□□□□□ -0.47
ERBB3-214ENST00000550070 ANKLE2Q86XL3 938 aa12.14□□□□□ -0.47
ERBB3-214ENST00000550070 PLA2G4DQ86XP0 818 aa12.14□□□□□ -0.47
ERBB3-214ENST00000550070 DDX11Q96FC9 970 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms