RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 RPGRQ92834 1020 aaKnown RBP15.1■□□□□ 0.01
PFDN5-208ENST00000549995 CSF1RP07333 972 aa15.09■□□□□ 0.01
PFDN5-208ENST00000549995 CTSWP56202 376 aa15.09■□□□□ 0.01
PFDN5-208ENST00000549995 GRAPQ13588 217 aa15.09■□□□□ 0.01
PFDN5-208ENST00000549995 GRIPAP1Q4V328 841 aa15.09■□□□□ 0.01
PFDN5-208ENST00000549995 CC2D2BQ6DHV5 1058 aa15.09■□□□□ 0.01
PFDN5-208ENST00000549995 ATF7IPQ6VMQ6 1270 aa15.09■□□□□ 0.01
PFDN5-208ENST00000549995 UBE3BQ7Z3V4 1068 aa15.09■□□□□ 0.01
PFDN5-208ENST00000549995 TMC4Q7Z404 712 aa15.09■□□□□ 0.01
PFDN5-208ENST00000549995 GRAPLQ8TC17 118 aaPredicted RBP15.09■□□□□ 0.01
PFDN5-208ENST00000549995 NFKBIEO00221 500 aa15.08■□□□□ 0
PFDN5-208ENST00000549995 IPO8O15397 1037 aaKnown RBP15.08■□□□□ 0
PFDN5-208ENST00000549995 TRIM27P14373 513 aa15.08■□□□□ 0
PFDN5-208ENST00000549995 CCT4P50991 539 aaKnown RBP15.08■□□□□ 0
PFDN5-208ENST00000549995 INTS3Q68E01 1043 aaKnown RBP15.08■□□□□ 0
PFDN5-208ENST00000549995 TTLL11Q8NHH1 800 aa15.08■□□□□ 0
PFDN5-208ENST00000549995 BBOX1O75936 387 aa15.07■□□□□ 0
PFDN5-208ENST00000549995 CCDC152Q4G0S7 254 aa15.07■□□□□ 0
PFDN5-208ENST00000549995 SLC4A10Q6U841 1118 aa15.07■□□□□ 0
PFDN5-208ENST00000549995 DDX46Q7L014 1031 aaKnown RBP15.07■□□□□ 0
PFDN5-208ENST00000549995 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
PFDN5-208ENST00000549995 PPEF1O14829 653 aaPredicted RBP15.06■□□□□ 0
PFDN5-208ENST00000549995 C21orf2O43822 256 aa15.06■□□□□ 0
PFDN5-208ENST00000549995 FOXO4P98177 505 aa15.06■□□□□ 0
PFDN5-208ENST00000549995 RABL6Q3YEC7 729 aaPredicted RBP15.06■□□□□ 0
PFDN5-208ENST00000549995 CCDC93Q567U6 631 aa15.06■□□□□ 0
PFDN5-208ENST00000549995 RTL5Q5HYW3 569 aaPredicted RBP15.06■□□□□ 0
PFDN5-208ENST00000549995 KAZALD1Q96I82 304 aa15.06■□□□□ 0
PFDN5-208ENST00000549995 PSMD1Q99460 953 aa15.06■□□□□ 0
PFDN5-208ENST00000549995 USP44Q9H0E7 712 aa15.06■□□□□ 0
PFDN5-208ENST00000549995 WWC3Q9ULE0 1092 aa15.06■□□□□ 0
PFDN5-208ENST00000549995 ATP6V0A2Q9Y487 856 aa15.06■□□□□ 0
PFDN5-208ENST00000549995 ZC3H4Q9UPT8 1303 aaKnown RBP15.06■□□□□ 0
PFDN5-208ENST00000549995 NBPF7P0C2Y1 421 aaPredicted RBP15.05■□□□□ -0
PFDN5-208ENST00000549995 PRELPP51888 382 aa15.05■□□□□ -0
PFDN5-208ENST00000549995 ZKSCAN2Q63HK3 967 aa15.05■□□□□ -0
PFDN5-208ENST00000549995 SP8Q8IXZ3 490 aa15.05■□□□□ -0
PFDN5-208ENST00000549995 JARID2Q92833 1246 aaPredicted RBP15.05■□□□□ -0
PFDN5-208ENST00000549995 FKBP4Q02790 459 aaKnown RBP eCLIP15.04■□□□□ -0
PFDN5-208ENST00000549995 RTKN2Q8IZC4 609 aa15.04■□□□□ -0
PFDN5-208ENST00000549995 CELF1Q92879 486 aaKnown RBP15.04■□□□□ -0
PFDN5-208ENST00000549995 RTFDC1Q9BY42 306 aaPredicted RBP15.04■□□□□ -0
PFDN5-208ENST00000549995 C9orf78Q9NZ63 289 aaPredicted RBP15.04■□□□□ -0
PFDN5-208ENST00000549995 EPHA10Q5JZY3 1008 aa15.03■□□□□ -0
PFDN5-208ENST00000549995 ARHGAP27Q6ZUM4 889 aa15.03■□□□□ -0
PFDN5-208ENST00000549995 RCAN3Q9UKA8 241 aa15.03■□□□□ -0
PFDN5-208ENST00000549995 PSME4Q14997 1843 aa15.03■□□□□ -0
PFDN5-208ENST00000549995 COL4A5P29400 1685 aa15.03■□□□□ -0
PFDN5-208ENST00000549995 LMNB1P20700 586 aa15.02■□□□□ -0
PFDN5-208ENST00000549995 RPS8P62241 208 aaKnown RBP15.02■□□□□ -0
PFDN5-208ENST00000549995 SUCLG2Q96I99 432 aa15.02■□□□□ -0
PFDN5-208ENST00000549995 TAOK3Q9H2K8 898 aa15.02■□□□□ -0
PFDN5-208ENST00000549995 GREM2Q9H772 168 aa15.02■□□□□ -0
PFDN5-208ENST00000549995 SEC31BQ9NQW1 1179 aa15.02■□□□□ -0
PFDN5-208ENST00000549995 TNNQ9UQP3 1299 aa15.02■□□□□ -0
PFDN5-208ENST00000549995 ZNF646O15015 1829 aaPredicted RBP15.01□□□□□ -0.01
PFDN5-208ENST00000549995 RASSF7Q02833 373 aa15.01□□□□□ -0.01
PFDN5-208ENST00000549995 OLFM4Q6UX06 510 aa15.01□□□□□ -0.01
PFDN5-208ENST00000549995 ANKRD44Q8N8A2 993 aa15.01□□□□□ -0.01
PFDN5-208ENST00000549995 CDC5LQ99459 802 aaKnown RBP15.01□□□□□ -0.01
PFDN5-208ENST00000549995 VPS33BQ9H267 617 aa15.01□□□□□ -0.01
PFDN5-208ENST00000549995 PODXL2Q9NZ53 605 aa15.01□□□□□ -0.01
PFDN5-208ENST00000549995 ITGA6P23229 1130 aa15□□□□□ -0.01
PFDN5-208ENST00000549995 FAM161AQ3B820 660 aa15□□□□□ -0.01
PFDN5-208ENST00000549995 SLC51AQ86UW1 340 aa15□□□□□ -0.01
PFDN5-208ENST00000549995 FRAT1Q92837 279 aaPredicted RBP15□□□□□ -0.01
PFDN5-208ENST00000549995 BSDC1Q9NW68 430 aaPredicted RBP15□□□□□ -0.01
PFDN5-208ENST00000549995 WDR90Q96KV7 1748 aa15□□□□□ -0.01
PFDN5-208ENST00000549995 LMBR1LQ6UX01 489 aa14.99□□□□□ -0.01
PFDN5-208ENST00000549995 DZIP1LQ8IYY4 767 aaKnown RBP14.99□□□□□ -0.01
PFDN5-208ENST00000549995 TMEM57Q8N5G2 664 aa14.99□□□□□ -0.01
PFDN5-208ENST00000549995 GNAI3P08754 354 aa14.98□□□□□ -0.01
PFDN5-208ENST00000549995 MS4A1P11836 297 aa14.98□□□□□ -0.01
PFDN5-208ENST00000549995 RLBP1P12271 317 aa14.98□□□□□ -0.01
PFDN5-208ENST00000549995 MTX1Q13505 466 aa14.98□□□□□ -0.01
PFDN5-208ENST00000549995 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
PFDN5-208ENST00000549995 ANKRD18AQ8IVF6 992 aa14.98□□□□□ -0.01
PFDN5-208ENST00000549995 MEIS3Q99687 375 aa14.98□□□□□ -0.01
PFDN5-208ENST00000549995 BICC1Q9H694 974 aaKnown RBP14.98□□□□□ -0.01
PFDN5-208ENST00000549995 ZNF219Q9P2Y4 722 aaPredicted RBP14.98□□□□□ -0.01
PFDN5-208ENST00000549995 HDAC5Q9UQL6 1122 aa14.98□□□□□ -0.01
PFDN5-208ENST00000549995 ANKRD18BA2A2Z9 1011 aa14.97□□□□□ -0.01
PFDN5-208ENST00000549995 UBTFL1P0CB47 393 aaPredicted RBP14.96□□□□□ -0.01
PFDN5-208ENST00000549995 YY1P25490 414 aa14.96□□□□□ -0.01
PFDN5-208ENST00000549995 IARSP41252 1262 aaKnown RBP14.96□□□□□ -0.01
PFDN5-208ENST00000549995 RFX5P48382 616 aaPredicted RBP14.96□□□□□ -0.01
PFDN5-208ENST00000549995 IFIT5Q13325 482 aaKnown RBP14.96□□□□□ -0.01
PFDN5-208ENST00000549995 MPNDQ8N594 471 aa14.96□□□□□ -0.01
PFDN5-208ENST00000549995 SUPT20HQ8NEM7 779 aa14.96□□□□□ -0.01
PFDN5-208ENST00000549995 ARAP2Q8WZ64 1704 aa14.96□□□□□ -0.01
PFDN5-208ENST00000549995 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.01
PFDN5-208ENST00000549995 CCDC85AQ96PX6 553 aaPredicted RBP14.96□□□□□ -0.01
PFDN5-208ENST00000549995 RNF181Q9P0P0 153 aa14.96□□□□□ -0.01
PFDN5-208ENST00000549995 XDHP47989 1333 aa14.95□□□□□ -0.02
PFDN5-208ENST00000549995 SCN4AP35499 1836 aa14.95□□□□□ -0.02
PFDN5-208ENST00000549995 IGHMBP2P38935 993 aaKnown RBP14.95□□□□□ -0.02
PFDN5-208ENST00000549995 GPSM2P81274 684 aa14.95□□□□□ -0.02
PFDN5-208ENST00000549995 KIAA2012Q0VF49 1180 aa14.95□□□□□ -0.02
PFDN5-208ENST00000549995 PDE3AQ14432 1141 aa14.95□□□□□ -0.02
PFDN5-208ENST00000549995 DPP8Q6V1X1 898 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms