RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 FAM35AQ86V20 835 aa7.77□□□□□ -1.17
SNRPF-202ENST00000549580 WFDC8Q8IUA0 241 aa7.77□□□□□ -1.17
SNRPF-202ENST00000549580 ALDH16A1Q8IZ83 802 aa7.77□□□□□ -1.17
SNRPF-202ENST00000549580 TMEM130Q8N3G9 435 aa7.77□□□□□ -1.17
SNRPF-202ENST00000549580 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.77□□□□□ -1.17
SNRPF-202ENST00000549580 F8W735 103 aaPredicted RBP7.76□□□□□ -1.17
SNRPF-202ENST00000549580 PPP1R12BO60237 982 aaPredicted RBP7.76□□□□□ -1.17
SNRPF-202ENST00000549580 LZTS3O60299 673 aaPredicted RBP7.76□□□□□ -1.17
SNRPF-202ENST00000549580 ZDHHC13Q8IUH4 622 aa7.76□□□□□ -1.17
SNRPF-202ENST00000549580 GAS2L2Q8NHY3 880 aa7.76□□□□□ -1.17
SNRPF-202ENST00000549580 NGLY1Q96IV0 654 aa7.76□□□□□ -1.17
SNRPF-202ENST00000549580 ADGRE2Q9UHX3 823 aa7.76□□□□□ -1.17
SNRPF-202ENST00000549580 ZNF777Q9ULD5 760 aaPredicted RBP7.76□□□□□ -1.17
SNRPF-202ENST00000549580 RAXQ9Y2V3 346 aa7.76□□□□□ -1.17
SNRPF-202ENST00000549580 PTCD1O75127 700 aaKnown RBP7.75□□□□□ -1.17
SNRPF-202ENST00000549580 GRNP28799 593 aaKnown RBP7.75□□□□□ -1.17
SNRPF-202ENST00000549580 PERM1Q5SV97 790 aa7.75□□□□□ -1.17
SNRPF-202ENST00000549580 DTX1Q86Y01 620 aa7.75□□□□□ -1.17
SNRPF-202ENST00000549580 NFATC2IPQ8NCF5 419 aa7.75□□□□□ -1.17
SNRPF-202ENST00000549580 TTC9Q92623 222 aa7.75□□□□□ -1.17
SNRPF-202ENST00000549580 MRPL18Q9H0U6 180 aaKnown RBP7.75□□□□□ -1.17
SNRPF-202ENST00000549580 ZBTB42B2RXF5 422 aa7.74□□□□□ -1.17
SNRPF-202ENST00000549580 LGR5O75473 907 aa7.74□□□□□ -1.17
SNRPF-202ENST00000549580 MLLT1Q03111 559 aaPredicted RBP7.74□□□□□ -1.17
SNRPF-202ENST00000549580 PNMA5Q96PV4 448 aa7.74□□□□□ -1.17
SNRPF-202ENST00000549580 CHMP3Q9Y3E7 222 aa7.74□□□□□ -1.17
SNRPF-202ENST00000549580 CHMP7Q8WUX9 453 aaPredicted RBP7.73□□□□□ -1.17
SNRPF-202ENST00000549580 BCS1LQ9Y276 419 aa7.73□□□□□ -1.17
SNRPF-202ENST00000549580 CCINQ13939 588 aa7.72□□□□□ -1.17
SNRPF-202ENST00000549580 PCSK7Q16549 785 aa7.72□□□□□ -1.17
SNRPF-202ENST00000549580 OGFOD2Q6N063 350 aa7.72□□□□□ -1.17
SNRPF-202ENST00000549580 INTS5Q6P9B9 1019 aaKnown RBP7.72□□□□□ -1.17
SNRPF-202ENST00000549580 KRT25Q7Z3Z0 450 aa7.72□□□□□ -1.17
SNRPF-202ENST00000549580 TRIM50Q86XT4 487 aa7.72□□□□□ -1.17
SNRPF-202ENST00000549580 OGFOD1Q8N543 542 aa7.72□□□□□ -1.17
SNRPF-202ENST00000549580 ADAMTS19Q8TE59 1207 aa7.72□□□□□ -1.17
SNRPF-202ENST00000549580 ZFATQ9P243 1243 aa7.72□□□□□ -1.17
SNRPF-202ENST00000549580 SERPINA10Q9UK55 444 aa7.72□□□□□ -1.17
SNRPF-202ENST00000549580 ATAD2Q6PL18 1390 aa7.71□□□□□ -1.17
SNRPF-202ENST00000549580 USP17L3A6NCW0 530 aa7.71□□□□□ -1.18
SNRPF-202ENST00000549580 USP17L4A6NCW7 530 aa7.71□□□□□ -1.18
SNRPF-202ENST00000549580 POM121CA8CG34 1229 aa7.71□□□□□ -1.18
SNRPF-202ENST00000549580 DKK1O94907 266 aa7.71□□□□□ -1.18
SNRPF-202ENST00000549580 USP17L2Q6R6M4 530 aa7.71□□□□□ -1.18
SNRPF-202ENST00000549580 USP17L1Q7RTZ2 530 aa7.71□□□□□ -1.18
SNRPF-202ENST00000549580 TRPM4Q8TD43 1214 aa7.71□□□□□ -1.18
SNRPF-202ENST00000549580 ZNF594Q96JF6 807 aaPredicted RBP7.71□□□□□ -1.18
SNRPF-202ENST00000549580 C2orf49Q9BVC5 232 aaPredicted RBP7.71□□□□□ -1.18
SNRPF-202ENST00000549580 KRTAP4-5Q9BYR2 181 aa7.71□□□□□ -1.18
SNRPF-202ENST00000549580 PRR19A6NJB7 356 aa7.7□□□□□ -1.18
SNRPF-202ENST00000549580 MAP3K6O95382 1288 aa7.7□□□□□ -1.18
SNRPF-202ENST00000549580 HFE2Q6ZVN8 426 aa7.7□□□□□ -1.18
SNRPF-202ENST00000549580 SCG3Q8WXD2 468 aaKnown RBP7.7□□□□□ -1.18
SNRPF-202ENST00000549580 DMGDHQ9UI17 866 aaKnown RBP7.7□□□□□ -1.18
SNRPF-202ENST00000549580 TARSP26639 723 aaKnown RBP7.69□□□□□ -1.18
SNRPF-202ENST00000549580 GRIK1P39086 918 aa7.69□□□□□ -1.18
SNRPF-202ENST00000549580 ATP1A2P50993 1020 aa7.69□□□□□ -1.18
SNRPF-202ENST00000549580 ELMSAN1Q6PJG2 1045 aa7.69□□□□□ -1.18
SNRPF-202ENST00000549580 UCN2Q96RP3 112 aa7.69□□□□□ -1.18
SNRPF-202ENST00000549580 UBL7Q96S82 380 aaPredicted RBP7.69□□□□□ -1.18
SNRPF-202ENST00000549580 STOML1Q9UBI4 398 aa7.69□□□□□ -1.18
SNRPF-202ENST00000549580 MKRN1Q9UHC7 482 aaKnown RBP7.69□□□□□ -1.18
SNRPF-202ENST00000549580 WNT11O96014 354 aa7.68□□□□□ -1.18
SNRPF-202ENST00000549580 C8AP07357 584 aa7.68□□□□□ -1.18
SNRPF-202ENST00000549580 NFIAQ12857 509 aa7.68□□□□□ -1.18
SNRPF-202ENST00000549580 TRIM26Q12899 539 aaPredicted RBP7.68□□□□□ -1.18
SNRPF-202ENST00000549580 ARMC10Q8N2F6 343 aa7.68□□□□□ -1.18
SNRPF-202ENST00000549580 AGGF1Q8N302 714 aaeCLIP7.68□□□□□ -1.18
SNRPF-202ENST00000549580 CCDC97Q96F63 343 aaPredicted RBP7.68□□□□□ -1.18
SNRPF-202ENST00000549580 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
SNRPF-202ENST00000549580 GLB1P16278 677 aa7.67□□□□□ -1.18
SNRPF-202ENST00000549580 GPLD1P80108 840 aa7.67□□□□□ -1.18
SNRPF-202ENST00000549580 IER5Q5VY09 327 aa7.67□□□□□ -1.18
SNRPF-202ENST00000549580 DHX32Q7L7V1 743 aaKnown RBP7.67□□□□□ -1.18
SNRPF-202ENST00000549580 PLEKHM2Q8IWE5 1019 aa7.67□□□□□ -1.18
SNRPF-202ENST00000549580 LARGE2Q8N3Y3 721 aa7.67□□□□□ -1.18
SNRPF-202ENST00000549580 POU5F2Q8N7G0 328 aa7.67□□□□□ -1.18
SNRPF-202ENST00000549580 IFT43Q96FT9 208 aa7.67□□□□□ -1.18
SNRPF-202ENST00000549580 PALM3A6NDB9 673 aaPredicted RBP7.66□□□□□ -1.18
SNRPF-202ENST00000549580 M0R2N6 131 aa7.66□□□□□ -1.18
SNRPF-202ENST00000549580 SASH3O75995 380 aa7.66□□□□□ -1.18
SNRPF-202ENST00000549580 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.66□□□□□ -1.18
SNRPF-202ENST00000549580 SMG9Q9H0W8 520 aaKnown RBP7.66□□□□□ -1.18
SNRPF-202ENST00000549580 KLK14Q9P0G3 267 aa7.66□□□□□ -1.18
SNRPF-202ENST00000549580 TGFBR3LH3BV60 316 aa7.65□□□□□ -1.18
SNRPF-202ENST00000549580 RASA1P20936 1047 aa7.65□□□□□ -1.18
SNRPF-202ENST00000549580 HIF1AQ16665 826 aa7.65□□□□□ -1.18
SNRPF-202ENST00000549580 WWC1Q8IX03 1113 aa7.65□□□□□ -1.18
SNRPF-202ENST00000549580 SIX5Q8N196 739 aa7.65□□□□□ -1.18
SNRPF-202ENST00000549580 SRA1Q9HD15 236 aaKnown RBP7.65□□□□□ -1.18
SNRPF-202ENST00000549580 USP20Q9Y2K6 914 aa7.65□□□□□ -1.18
SNRPF-202ENST00000549580 DHX15O43143 795 aaKnown RBP7.64□□□□□ -1.19
SNRPF-202ENST00000549580 PDIA4P13667 645 aaKnown RBP7.64□□□□□ -1.19
SNRPF-202ENST00000549580 INPP5BP32019 993 aa7.64□□□□□ -1.19
SNRPF-202ENST00000549580 IDH3AP50213 366 aa7.64□□□□□ -1.19
SNRPF-202ENST00000549580 SETDB1Q15047 1291 aa7.64□□□□□ -1.19
SNRPF-202ENST00000549580 KRTAP17-1Q9BYP8 105 aa7.64□□□□□ -1.19
SNRPF-202ENST00000549580 J3QW42 95 aa7.63□□□□□ -1.19
SNRPF-202ENST00000549580 ATP9BO43861 1147 aa7.63□□□□□ -1.19
SNRPF-202ENST00000549580 RTN1Q16799 776 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms