RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 MYH14Q7Z406 1995 aaKnown RBP9.35□□□□□ -0.91
DEPDC4-208ENST00000549341 ANKRD26Q9UPS8 1709 aa9.34□□□□□ -0.91
DEPDC4-208ENST00000549341 TBC1D9BQ66K14 1250 aa9.34□□□□□ -0.91
DEPDC4-208ENST00000549341 PRR5LQ6MZQ0 368 aa9.34□□□□□ -0.91
DEPDC4-208ENST00000549341 CYP4F22Q6NT55 531 aa9.34□□□□□ -0.91
DEPDC4-208ENST00000549341 CNTROBQ8N137 903 aa9.34□□□□□ -0.91
DEPDC4-208ENST00000549341 CNBD1Q8NA66 436 aa9.34□□□□□ -0.91
DEPDC4-208ENST00000549341 CAPNS2Q96L46 248 aa9.34□□□□□ -0.91
DEPDC4-208ENST00000549341 CFAP53Q96M91 514 aa9.34□□□□□ -0.91
DEPDC4-208ENST00000549341 ZNF277Q9NRM2 450 aaPredicted RBP9.34□□□□□ -0.91
DEPDC4-208ENST00000549341 ADAMTS7Q9UKP4 1686 aa9.33□□□□□ -0.92
DEPDC4-208ENST00000549341 PPP2R1AP30153 589 aa9.33□□□□□ -0.92
DEPDC4-208ENST00000549341 RGS19P49795 217 aa9.33□□□□□ -0.92
DEPDC4-208ENST00000549341 FOSBP53539 338 aa9.33□□□□□ -0.92
DEPDC4-208ENST00000549341 PNISRQ8TF01 805 aaKnown RBP9.33□□□□□ -0.92
DEPDC4-208ENST00000549341 ZBED2Q9BTP6 218 aa9.33□□□□□ -0.92
DEPDC4-208ENST00000549341 BRIP1Q9BX63 1249 aa9.33□□□□□ -0.92
DEPDC4-208ENST00000549341 MCOLN1Q9GZU1 580 aa9.33□□□□□ -0.92
DEPDC4-208ENST00000549341 PDE4DIPQ5VU43 2346 aa9.32□□□□□ -0.92
DEPDC4-208ENST00000549341 ST5P78524 1137 aa9.32□□□□□ -0.92
DEPDC4-208ENST00000549341 FMR1Q06787 632 aaKnown RBP eCLIP9.32□□□□□ -0.92
DEPDC4-208ENST00000549341 CCDC93Q567U6 631 aa9.32□□□□□ -0.92
DEPDC4-208ENST00000549341 SOGA3Q5TF21 947 aa9.32□□□□□ -0.92
DEPDC4-208ENST00000549341 CNKSR1Q969H4 720 aa9.32□□□□□ -0.92
DEPDC4-208ENST00000549341 SLC52A2Q9HAB3 445 aa9.32□□□□□ -0.92
DEPDC4-208ENST00000549341 DLEC1Q9Y238 1755 aa9.32□□□□□ -0.92
DEPDC4-208ENST00000549341 COL11A2P13942 1736 aaPredicted RBP9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 NRXN2Q9P2S2 1712 aa9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 AOC2O75106 756 aa9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 ECE1P42892 770 aa9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 CCDC184Q52MB2 194 aa9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 SULT6B1Q6IMI4 303 aa9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 OLFM4Q6UX06 510 aa9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 PNMA8AQ86V59 439 aaPredicted RBP9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 GPR101Q96P66 508 aaPredicted RBP9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 DDX21Q9NR30 783 aaKnown RBP eCLIP9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 PDZRN3Q9UPQ7 1066 aa9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 TBC1D2BQ9UPU7 963 aa9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 ZBED9Q6R2W3 1325 aa9.31□□□□□ -0.92
DEPDC4-208ENST00000549341 A0A087WZG4 1122 aa9.3□□□□□ -0.92
DEPDC4-208ENST00000549341 TRAF5O00463 557 aa9.3□□□□□ -0.92
DEPDC4-208ENST00000549341 SOX10P56693 466 aa9.3□□□□□ -0.92
DEPDC4-208ENST00000549341 DGKZQ13574 1117 aa9.3□□□□□ -0.92
DEPDC4-208ENST00000549341 STYK1Q6J9G0 422 aa9.3□□□□□ -0.92
DEPDC4-208ENST00000549341 GJA3Q9Y6H8 435 aa9.3□□□□□ -0.92
DEPDC4-208ENST00000549341 TNRC18O15417 2968 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-208ENST00000549341 STARD3NLO95772 234 aa9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 SRGNP10124 158 aa9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 LMOD1P29536 600 aaPredicted RBP9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 FKBP4Q02790 459 aaKnown RBP eCLIP9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 AKAP4Q5JQC9 854 aa9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 NPM2Q86SE8 214 aaKnown RBP9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 HS6ST3Q8IZP7 471 aa9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 TTC5Q8N0Z6 440 aa9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 MASTLQ96GX5 879 aa9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 LGR6Q9HBX8 967 aa9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 RYDENQ9NUL5 291 aaKnown RBP9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 NUDCQ9Y266 331 aa9.29□□□□□ -0.92
DEPDC4-208ENST00000549341 AFDNP55196 1824 aaKnown RBP9.28□□□□□ -0.92
DEPDC4-208ENST00000549341 MRC1P22897 1456 aa9.28□□□□□ -0.92
DEPDC4-208ENST00000549341 EIF5P55010 431 aaKnown RBP9.28□□□□□ -0.92
DEPDC4-208ENST00000549341 NGEFQ8N5V2 710 aa9.28□□□□□ -0.92
DEPDC4-208ENST00000549341 ZDHHC16Q969W1 377 aa9.28□□□□□ -0.92
DEPDC4-208ENST00000549341 SETDB2Q96T68 719 aa9.28□□□□□ -0.92
DEPDC4-208ENST00000549341 LTBP1Q14766 1721 aa9.28□□□□□ -0.92
DEPDC4-208ENST00000549341 THSD7BQ9C0I4 1608 aa9.27□□□□□ -0.92
DEPDC4-208ENST00000549341 RNMTO43148 476 aaKnown RBP9.27□□□□□ -0.93
DEPDC4-208ENST00000549341 IARSP41252 1262 aaKnown RBP9.27□□□□□ -0.93
DEPDC4-208ENST00000549341 NBPF5PQ86XG9 351 aaPredicted RBP9.27□□□□□ -0.93
DEPDC4-208ENST00000549341 GPC2Q8N158 579 aa9.27□□□□□ -0.93
DEPDC4-208ENST00000549341 PNNQ9H307 717 aaKnown RBP9.27□□□□□ -0.93
DEPDC4-208ENST00000549341 ZNF408Q9H9D4 720 aa9.27□□□□□ -0.93
DEPDC4-208ENST00000549341 SCN7AQ01118 1682 aa9.26□□□□□ -0.93
DEPDC4-208ENST00000549341 FAM177BA6PVY3 158 aa9.26□□□□□ -0.93
DEPDC4-208ENST00000549341 CA12O43570 354 aa9.26□□□□□ -0.93
DEPDC4-208ENST00000549341 NEFLP07196 543 aa9.26□□□□□ -0.93
DEPDC4-208ENST00000549341 NPR1P16066 1061 aa9.26□□□□□ -0.93
DEPDC4-208ENST00000549341 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
DEPDC4-208ENST00000549341 VSIG10Q8N0Z9 540 aa9.26□□□□□ -0.93
DEPDC4-208ENST00000549341 ANKK1Q8NFD2 765 aa9.26□□□□□ -0.93
DEPDC4-208ENST00000549341 JDP2Q8WYK2 163 aa9.26□□□□□ -0.93
DEPDC4-208ENST00000549341 TLL2Q9Y6L7 1015 aa9.26□□□□□ -0.93
DEPDC4-208ENST00000549341 ADAMTSL1Q8N6G6 1762 aa9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 CAMTA2O94983 1202 aa9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 CELF2O95319 508 aaKnown RBP9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 HMOX1P09601 288 aa9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 EPS15P42566 896 aa9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 PIP4K2AP48426 406 aaPredicted RBP9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 EIF6P56537 245 aaKnown RBP9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 PRPF38BQ5VTL8 546 aaKnown RBP9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 CIAPIN1Q6FI81 312 aa9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 NYAP1Q6ZVC0 841 aa9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 RTKN2Q8IZC4 609 aa9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 C7orf43Q8WVR3 580 aa9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 CRISPLD2Q9H0B8 497 aa9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 VIRMAQ69YN4 1812 aaKnown RBP9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 FER1L6Q2WGJ9 1857 aa9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 ANKRD31Q8N7Z5 1873 aa9.25□□□□□ -0.93
DEPDC4-208ENST00000549341 FZD9O00144 591 aa9.24□□□□□ -0.93
DEPDC4-208ENST00000549341 NEFMP07197 916 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms