RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 GCKRQ14397 625 aa15.05■□□□□ -0
RAB5C-204ENST00000547517 CC2D2BQ6DHV5 1058 aa15.05■□□□□ -0
RAB5C-204ENST00000547517 UBE3BQ7Z3V4 1068 aa15.05■□□□□ -0
RAB5C-204ENST00000547517 MRPL50Q8N5N7 158 aaKnown RBP15.05■□□□□ -0
RAB5C-204ENST00000547517 LINS1Q8NG48 757 aa15.05■□□□□ -0
RAB5C-204ENST00000547517 SSH1Q8WYL5 1049 aa15.05■□□□□ -0
RAB5C-204ENST00000547517 CCDC85AQ96PX6 553 aaPredicted RBP15.05■□□□□ -0
RAB5C-204ENST00000547517 TMX4Q9H1E5 349 aaPredicted RBP15.05■□□□□ -0
RAB5C-204ENST00000547517 ATP6V0A2Q9Y487 856 aa15.05■□□□□ -0
RAB5C-204ENST00000547517 DICER1Q9UPY3 1922 aaKnown RBP15.05■□□□□ -0
RAB5C-204ENST00000547517 LRRC37AA6NMS7 1700 aa15.04■□□□□ -0
RAB5C-204ENST00000547517 CTSWP56202 376 aa15.04■□□□□ -0
RAB5C-204ENST00000547517 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
RAB5C-204ENST00000547517 CELF1Q92879 486 aaKnown RBP15.04■□□□□ -0
RAB5C-204ENST00000547517 SMC4Q9NTJ3 1288 aa15.04■□□□□ -0
RAB5C-204ENST00000547517 KDM2BQ8NHM5 1336 aa15.03■□□□□ -0
RAB5C-204ENST00000547517 BBOX1O75936 387 aa15.03■□□□□ -0
RAB5C-204ENST00000547517 CCDC152Q4G0S7 254 aa15.03■□□□□ -0
RAB5C-204ENST00000547517 BEND3Q5T5X7 828 aa15.03■□□□□ -0
RAB5C-204ENST00000547517 PSMD1Q99460 953 aa15.03■□□□□ -0
RAB5C-204ENST00000547517 NMRK2Q9NPI5 230 aa15.03■□□□□ -0
RAB5C-204ENST00000547517 MYH3P11055 1940 aa15.02■□□□□ -0
RAB5C-204ENST00000547517 CT47B1P0C2W7 299 aaPredicted RBP15.02■□□□□ -0
RAB5C-204ENST00000547517 IARSP41252 1262 aaKnown RBP15.02■□□□□ -0
RAB5C-204ENST00000547517 ALDH1L2Q3SY69 923 aa15.02■□□□□ -0
RAB5C-204ENST00000547517 GRIPAP1Q4V328 841 aa15.02■□□□□ -0
RAB5C-204ENST00000547517 SEC31BQ9NQW1 1179 aa15.02■□□□□ -0
RAB5C-204ENST00000547517 PTPRCP08575 1304 aa15.01□□□□□ -0.01
RAB5C-204ENST00000547517 COL4A5P29400 1685 aa15.01□□□□□ -0.01
RAB5C-204ENST00000547517 H7C1W4 665 aa15.01□□□□□ -0.01
RAB5C-204ENST00000547517 DPP8Q6V1X1 898 aaPredicted RBP15.01□□□□□ -0.01
RAB5C-204ENST00000547517 TMC4Q7Z404 712 aa15.01□□□□□ -0.01
RAB5C-204ENST00000547517 SP8Q8IXZ3 490 aa15.01□□□□□ -0.01
RAB5C-204ENST00000547517 DUOX1Q9NRD9 1551 aa15.01□□□□□ -0.01
RAB5C-204ENST00000547517 GLTPD2A6NH11 291 aa15□□□□□ -0.01
RAB5C-204ENST00000547517 KIF3CO14782 793 aa15□□□□□ -0.01
RAB5C-204ENST00000547517 CASP7P55210 303 aa15□□□□□ -0.01
RAB5C-204ENST00000547517 MPNDQ8N594 471 aa15□□□□□ -0.01
RAB5C-204ENST00000547517 SPEF2Q9C093 1822 aa14.99□□□□□ -0.01
RAB5C-204ENST00000547517 ZBED9Q6R2W3 1325 aa14.99□□□□□ -0.01
RAB5C-204ENST00000547517 RPS8P62241 208 aaKnown RBP14.99□□□□□ -0.01
RAB5C-204ENST00000547517 AOC3Q16853 763 aa14.99□□□□□ -0.01
RAB5C-204ENST00000547517 LARGE2Q8N3Y3 721 aa14.99□□□□□ -0.01
RAB5C-204ENST00000547517 TTLL11Q8NHH1 800 aa14.99□□□□□ -0.01
RAB5C-204ENST00000547517 SRCIN1Q9C0H9 1055 aa14.99□□□□□ -0.01
RAB5C-204ENST00000547517 GREM2Q9H772 168 aa14.99□□□□□ -0.01
RAB5C-204ENST00000547517 ZNF541Q9H0D2 1346 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 GRM8O00222 908 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 PPIP5K2O43314 1243 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 ALDH1L1O75891 902 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 FAM161AQ3B820 660 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 DPY19L2Q6NUT2 758 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 ANKRD18AQ8IVF6 992 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 SUPT20HQ8NEM7 779 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 JDP2Q8WYK2 163 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 CDC5LQ99459 802 aaKnown RBP14.98□□□□□ -0.01
RAB5C-204ENST00000547517 PLA2G12BQ9BX93 195 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 RRAGCQ9HB90 399 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 RTL9Q8NET4 1388 aa14.98□□□□□ -0.01
RAB5C-204ENST00000547517 LTBP1Q14766 1721 aa14.97□□□□□ -0.01
RAB5C-204ENST00000547517 RARSP54136 660 aaKnown RBP14.97□□□□□ -0.01
RAB5C-204ENST00000547517 GPSM2P81274 684 aa14.97□□□□□ -0.01
RAB5C-204ENST00000547517 RTFDC1Q9BY42 306 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-204ENST00000547517 C9orf78Q9NZ63 289 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-204ENST00000547517 WDR90Q96KV7 1748 aa14.97□□□□□ -0.01
RAB5C-204ENST00000547517 DDNO94850 711 aaPredicted RBP14.96□□□□□ -0.01
RAB5C-204ENST00000547517 NIM1KQ8IY84 436 aa14.96□□□□□ -0.01
RAB5C-204ENST00000547517 C16orf71Q8IYS4 520 aaPredicted RBP14.96□□□□□ -0.01
RAB5C-204ENST00000547517 NOB1Q9ULX3 412 aaKnown RBP14.96□□□□□ -0.01
RAB5C-204ENST00000547517 NSFL1CQ9UNZ2 370 aaKnown RBP14.96□□□□□ -0.01
RAB5C-204ENST00000547517 KIF16BQ96L93 1317 aa14.95□□□□□ -0.02
RAB5C-204ENST00000547517 ITGA6P23229 1130 aa14.95□□□□□ -0.02
RAB5C-204ENST00000547517 CHMP3Q9Y3E7 222 aa14.95□□□□□ -0.02
RAB5C-204ENST00000547517 C6orf229H3BNL8 230 aa14.94□□□□□ -0.02
RAB5C-204ENST00000547517 FZD9O00144 591 aa14.94□□□□□ -0.02
RAB5C-204ENST00000547517 EIF6P56537 245 aaKnown RBP14.94□□□□□ -0.02
RAB5C-204ENST00000547517 FOXO4P98177 505 aa14.94□□□□□ -0.02
RAB5C-204ENST00000547517 KIAA2012Q0VF49 1180 aa14.94□□□□□ -0.02
RAB5C-204ENST00000547517 EPHA10Q5JZY3 1008 aa14.94□□□□□ -0.02
RAB5C-204ENST00000547517 GPR101Q96P66 508 aaPredicted RBP14.94□□□□□ -0.02
RAB5C-204ENST00000547517 ANKIB1Q9P2G1 1089 aa14.94□□□□□ -0.02
RAB5C-204ENST00000547517 UFL1O94874 794 aa14.93□□□□□ -0.02
RAB5C-204ENST00000547517 CSF1RP07333 972 aa14.93□□□□□ -0.02
RAB5C-204ENST00000547517 NBPF7P0C2Y1 421 aaPredicted RBP14.93□□□□□ -0.02
RAB5C-204ENST00000547517 VEGFAP15692 232 aaPredicted RBP14.93□□□□□ -0.02
RAB5C-204ENST00000547517 IGHMBP2P38935 993 aaKnown RBP14.93□□□□□ -0.02
RAB5C-204ENST00000547517 BRPF1P55201 1214 aaPredicted RBP14.93□□□□□ -0.02
RAB5C-204ENST00000547517 TBC1D16Q8TBP0 767 aa14.93□□□□□ -0.02
RAB5C-204ENST00000547517 SUCLG2Q96I99 432 aa14.93□□□□□ -0.02
RAB5C-204ENST00000547517 API5Q9BZZ5 524 aaKnown RBP14.93□□□□□ -0.02
RAB5C-204ENST00000547517 VPS33BQ9H267 617 aa14.93□□□□□ -0.02
RAB5C-204ENST00000547517 POLLQ9UGP5 575 aa14.93□□□□□ -0.02
RAB5C-204ENST00000547517 ANKRD18BA2A2Z9 1011 aa14.92□□□□□ -0.02
RAB5C-204ENST00000547517 RIMBP2O15034 1052 aa14.92□□□□□ -0.02
RAB5C-204ENST00000547517 TOMM70O94826 608 aa14.92□□□□□ -0.02
RAB5C-204ENST00000547517 WASHC4Q2M389 1173 aa14.92□□□□□ -0.02
RAB5C-204ENST00000547517 LMBR1LQ6UX01 489 aa14.92□□□□□ -0.02
RAB5C-204ENST00000547517 BSDC1Q9NW68 430 aaPredicted RBP14.92□□□□□ -0.02
RAB5C-204ENST00000547517 GGA1Q9UJY5 639 aa14.92□□□□□ -0.02
RAB5C-204ENST00000547517 GJA3Q9Y6H8 435 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms