RNA–Protein interactions for RNA: ENST00000546318.2

IFIT1-202, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

TSL 3 BASIC

Gene IFIT1, Length 4,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-202ENST00000546318 LMBRD1Q9NUN5 540 aa7.85□□□□□ -1.15
IFIT1-202ENST00000546318 DBNLQ9UJU6 430 aaKnown RBP7.85□□□□□ -1.15
IFIT1-202ENST00000546318 ITGB4P16144 1822 aa7.85□□□□□ -1.15
IFIT1-202ENST00000546318 PRPF40AO75400 957 aaKnown RBP7.85□□□□□ -1.15
IFIT1-202ENST00000546318 XRCC6P12956 609 aaKnown RBP eCLIP7.85□□□□□ -1.15
IFIT1-202ENST00000546318 FBXO3Q9UK99 471 aa7.85□□□□□ -1.15
IFIT1-202ENST00000546318 SLC27A2O14975 620 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 NECTIN1Q15223 517 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 RASEFQ8IZ41 740 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 CHMP4CQ96CF2 233 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 CDCA7Q9BWT1 371 aaPredicted RBP7.84□□□□□ -1.15
IFIT1-202ENST00000546318 ZNF330Q9Y3S2 320 aaPredicted RBP7.84□□□□□ -1.15
IFIT1-202ENST00000546318 U3KPZ7 1027 aaPredicted RBP7.84□□□□□ -1.15
IFIT1-202ENST00000546318 PALLDQ8WX93 1383 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 RPAP1Q9BWH6 1393 aaPredicted RBP7.84□□□□□ -1.15
IFIT1-202ENST00000546318 ANKRD36CQ5JPF3 1778 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 COL16A1Q07092 1604 aaPredicted RBP7.84□□□□□ -1.15
IFIT1-202ENST00000546318 A0A0D9SFI3 127 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 CCDC57Q2TAC2 916 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 AKAP2Q9Y2D5 859 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 ZDHHC9Q9Y397 364 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 EYA2O00167 538 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 PHF14O94880 888 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 TCIRG1Q13488 830 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 CAVIN1Q6NZI2 390 aaKnown RBP7.84□□□□□ -1.15
IFIT1-202ENST00000546318 FAM43AQ8N2R8 423 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 SH3TC1Q8TE82 1336 aa7.84□□□□□ -1.15
IFIT1-202ENST00000546318 TAF7LQ5H9L4 462 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 FOXD4L5Q5VV16 416 aaPredicted RBP7.83□□□□□ -1.16
IFIT1-202ENST00000546318 BLOC1S2Q6QNY1 142 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 FOXD4L4Q8WXT5 416 aaPredicted RBP7.83□□□□□ -1.16
IFIT1-202ENST00000546318 ISCA1Q9BUE6 129 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.83□□□□□ -1.16
IFIT1-202ENST00000546318 NEUROD6Q96NK8 337 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 DBNDD2Q9BQY9 259 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 PLA2G12BQ9BX93 195 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 ALDH8A1Q9H2A2 487 aaPredicted RBP7.83□□□□□ -1.16
IFIT1-202ENST00000546318 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.83□□□□□ -1.16
IFIT1-202ENST00000546318 PCCAP05165 728 aaPredicted RBP7.83□□□□□ -1.16
IFIT1-202ENST00000546318 ZNF445P59923 1031 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 MCMDC2Q4G0Z9 681 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 HELLSQ9NRZ9 838 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 MAP3K15Q6ZN16 1313 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 ZSCAN23Q3MJ62 389 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 PIGBQ92521 554 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 PAG1Q9NWQ8 432 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 CDHR2Q9BYE9 1310 aa7.83□□□□□ -1.16
IFIT1-202ENST00000546318 DOT1LQ8TEK3 1739 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 BCL9O00512 1426 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 EXOC5O00471 708 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 ZSCAN22P10073 491 aaPredicted RBP7.82□□□□□ -1.16
IFIT1-202ENST00000546318 CCDC158Q5M9N0 1113 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 ATG9AQ7Z3C6 839 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 KBTBD3Q8NAB2 608 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 STX6O43752 255 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 RPS6KB1P23443 525 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 TRIM28Q13263 835 aaKnown RBP7.82□□□□□ -1.16
IFIT1-202ENST00000546318 TSGA10IPQ3SY00 556 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 TTC39AQ5SRH9 613 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.82□□□□□ -1.16
IFIT1-202ENST00000546318 ABCC12Q96J65 1359 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 GORABQ5T7V8 394 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 ZBTB38Q8NAP3 1195 aaPredicted RBP7.82□□□□□ -1.16
IFIT1-202ENST00000546318 CEP126Q9P2H0 1117 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 PHLPP1O60346 1717 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 HMGB1P09429 215 aaKnown RBP7.82□□□□□ -1.16
IFIT1-202ENST00000546318 GJB2P29033 226 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 CCDC83Q8IWF9 413 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 DNAJC10Q8IXB1 793 aa7.82□□□□□ -1.16
IFIT1-202ENST00000546318 THRAP3Q9Y2W1 955 aaKnown RBP7.82□□□□□ -1.16
IFIT1-202ENST00000546318 PDCP20941 246 aa7.81□□□□□ -1.16
IFIT1-202ENST00000546318 IFIT5Q13325 482 aaKnown RBP7.81□□□□□ -1.16
IFIT1-202ENST00000546318 ADCK5Q3MIX3 580 aa7.81□□□□□ -1.16
IFIT1-202ENST00000546318 TRIM44Q96DX7 344 aaPredicted RBP7.81□□□□□ -1.16
IFIT1-202ENST00000546318 NRAPQ86VF7 1730 aa7.81□□□□□ -1.16
IFIT1-202ENST00000546318 TAF5LO75529 589 aa7.81□□□□□ -1.16
IFIT1-202ENST00000546318 IFIT1P09914 478 aaKnown RBP7.81□□□□□ -1.16
IFIT1-202ENST00000546318 NASPP49321 788 aaPredicted RBP7.81□□□□□ -1.16
IFIT1-202ENST00000546318 CCDC173Q0VFZ6 552 aa7.81□□□□□ -1.16
IFIT1-202ENST00000546318 USPL1Q5W0Q7 1092 aa7.81□□□□□ -1.16
IFIT1-202ENST00000546318 ZNF589Q86UQ0 364 aaPredicted RBP7.81□□□□□ -1.16
IFIT1-202ENST00000546318 ASAP1Q9ULH1 1129 aa7.81□□□□□ -1.16
IFIT1-202ENST00000546318 F13A1P00488 732 aa7.81□□□□□ -1.16
IFIT1-202ENST00000546318 DDX46Q7L014 1031 aaKnown RBP7.81□□□□□ -1.16
IFIT1-202ENST00000546318 TMEM87AQ8NBN3 555 aa7.81□□□□□ -1.16
IFIT1-202ENST00000546318 GOLIM4O00461 696 aa7.8□□□□□ -1.16
IFIT1-202ENST00000546318 GIGYF2Q6Y7W6 1299 aaKnown RBP7.8□□□□□ -1.16
IFIT1-202ENST00000546318 GPT2Q8TD30 523 aa7.8□□□□□ -1.16
IFIT1-202ENST00000546318 DSCC1Q9BVC3 393 aa7.8□□□□□ -1.16
IFIT1-202ENST00000546318 A0A1B0GUL7 405 aa7.8□□□□□ -1.16
IFIT1-202ENST00000546318 RNF113AO15541 343 aaKnown RBP7.8□□□□□ -1.16
IFIT1-202ENST00000546318 HSP90B1P14625 803 aaKnown RBP7.8□□□□□ -1.16
IFIT1-202ENST00000546318 SYTL4Q96C24 671 aaPredicted RBP7.8□□□□□ -1.16
IFIT1-202ENST00000546318 NEK1Q96PY6 1258 aa7.8□□□□□ -1.16
IFIT1-202ENST00000546318 LETM1O95202 739 aaPredicted RBP7.8□□□□□ -1.16
IFIT1-202ENST00000546318 ZFYP08048 801 aaPredicted RBP7.8□□□□□ -1.16
IFIT1-202ENST00000546318 CPA1P15085 419 aa7.8□□□□□ -1.16
IFIT1-202ENST00000546318 CCDC9Q9Y3X0 531 aaKnown RBP7.8□□□□□ -1.16
IFIT1-202ENST00000546318 MYH3P11055 1940 aa7.79□□□□□ -1.16
IFIT1-202ENST00000546318 ANKRD18BA2A2Z9 1011 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms