RNA–Protein interactions for RNA: ENST00000544760.1

KDM5A-210, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-210ENST00000544760 FOXR1Q6PIV2 292 aa23.15■■□□□ 1.3
KDM5A-210ENST00000544760 NRXN1Q9ULB1 1477 aa23.15■■□□□ 1.3
KDM5A-210ENST00000544760 HMMRO75330 724 aa23.15■■□□□ 1.3
KDM5A-210ENST00000544760 GNAI3P08754 354 aa23.15■■□□□ 1.3
KDM5A-210ENST00000544760 TADA2BQ86TJ2 420 aa23.15■■□□□ 1.3
KDM5A-210ENST00000544760 PDRG1Q9NUG6 133 aa23.15■■□□□ 1.3
KDM5A-210ENST00000544760 VPS37CA5D8V6 355 aaPredicted RBP23.14■■□□□ 1.3
KDM5A-210ENST00000544760 MSL3Q8N5Y2 521 aaKnown RBP23.14■■□□□ 1.3
KDM5A-210ENST00000544760 ADGRL3Q9HAR2 1447 aa23.14■■□□□ 1.29
KDM5A-210ENST00000544760 A0A087WUV0 522 aaPredicted RBP23.14■■□□□ 1.29
KDM5A-210ENST00000544760 SMC2O95347 1197 aa23.14■■□□□ 1.29
KDM5A-210ENST00000544760 JAKMIP3Q5VZ66 844 aa23.14■■□□□ 1.29
KDM5A-210ENST00000544760 PRAM1Q96QH2 718 aa23.14■■□□□ 1.29
KDM5A-210ENST00000544760 CARD6Q9BX69 1037 aa23.14■■□□□ 1.29
KDM5A-210ENST00000544760 ANKRD26Q9UPS8 1709 aa23.14■■□□□ 1.29
KDM5A-210ENST00000544760 ZNF853P0CG23 659 aa23.13■■□□□ 1.29
KDM5A-210ENST00000544760 SNX14Q9Y5W7 946 aa23.13■■□□□ 1.29
KDM5A-210ENST00000544760 CDK12Q9NYV4 1490 aaPredicted RBP23.13■■□□□ 1.29
KDM5A-210ENST00000544760 FCHSD2O94868 740 aa23.12■■□□□ 1.29
KDM5A-210ENST00000544760 NBPF20Q3BBV1 942 aa23.12■■□□□ 1.29
KDM5A-210ENST00000544760 UBR1Q8IWV7 1749 aa23.12■■□□□ 1.29
KDM5A-210ENST00000544760 PUS7Q96PZ0 661 aaKnown RBP23.12■■□□□ 1.29
KDM5A-210ENST00000544760 RAI14Q9P0K7 980 aa23.12■■□□□ 1.29
KDM5A-210ENST00000544760 NRDCO43847 1150 aa23.11■■□□□ 1.29
KDM5A-210ENST00000544760 STX1AQ16623 288 aa23.11■■□□□ 1.29
KDM5A-210ENST00000544760 DNAJC21Q5F1R6 531 aaKnown RBP23.11■■□□□ 1.29
KDM5A-210ENST00000544760 C11orf57Q6ZUT1 292 aaPredicted RBP23.11■■□□□ 1.29
KDM5A-210ENST00000544760 HOMER1Q86YM7 354 aa23.11■■□□□ 1.29
KDM5A-210ENST00000544760 ZSCAN31Q96LW9 406 aaPredicted RBP23.11■■□□□ 1.29
KDM5A-210ENST00000544760 SH2B1Q9NRF2 756 aaPredicted RBP23.11■■□□□ 1.29
KDM5A-210ENST00000544760 ADGRB1O14514 1584 aa23.11■■□□□ 1.29
KDM5A-210ENST00000544760 NR1I2O75469 434 aa23.11■■□□□ 1.29
KDM5A-210ENST00000544760 DNAAF4Q8WXU2 420 aa23.11■■□□□ 1.29
KDM5A-210ENST00000544760 VPS18Q9P253 973 aa23.11■■□□□ 1.29
KDM5A-210ENST00000544760 CCDC83Q8IWF9 413 aa23.1■■□□□ 1.29
KDM5A-210ENST00000544760 MBIPQ9NS73 344 aa23.1■■□□□ 1.29
KDM5A-210ENST00000544760 PARP3Q9Y6F1 533 aa23.1■■□□□ 1.29
KDM5A-210ENST00000544760 ZFYVE9O95405 1425 aa23.1■■□□□ 1.29
KDM5A-210ENST00000544760 BECN2A8MW95 431 aa23.1■■□□□ 1.29
KDM5A-210ENST00000544760 LARGE1O95461 756 aa23.1■■□□□ 1.29
KDM5A-210ENST00000544760 LONRF2Q1L5Z9 754 aa23.1■■□□□ 1.29
KDM5A-210ENST00000544760 RSRC2Q7L4I2 434 aaKnown RBP23.1■■□□□ 1.29
KDM5A-210ENST00000544760 NBPF11Q86T75 865 aa23.1■■□□□ 1.29
KDM5A-210ENST00000544760 RILPL2Q969X0 211 aa23.1■■□□□ 1.29
KDM5A-210ENST00000544760 SYTL4Q96C24 671 aaPredicted RBP23.1■■□□□ 1.29
KDM5A-210ENST00000544760 SPATA32Q96LK8 384 aa23.1■■□□□ 1.29
KDM5A-210ENST00000544760 TACO1Q9BSH4 297 aaKnown RBP23.1■■□□□ 1.29
KDM5A-210ENST00000544760 CCDC151A5D8V7 595 aa23.09■■□□□ 1.29
KDM5A-210ENST00000544760 ELL2O00472 640 aaPredicted RBP23.09■■□□□ 1.29
KDM5A-210ENST00000544760 DIAPH1O60610 1272 aaKnown RBP23.09■■□□□ 1.29
KDM5A-210ENST00000544760 URI1O94763 535 aaPredicted RBP23.09■■□□□ 1.29
KDM5A-210ENST00000544760 APOBRQ0VD83 1088 aa23.09■■□□□ 1.29
KDM5A-210ENST00000544760 TRIM65Q6PJ69 517 aa23.09■■□□□ 1.29
KDM5A-210ENST00000544760 RABGGTAQ92696 567 aa23.09■■□□□ 1.29
KDM5A-210ENST00000544760 FAM107BQ9H098 131 aa23.09■■□□□ 1.29
KDM5A-210ENST00000544760 SRGAP3O43295 1099 aa23.09■■□□□ 1.29
KDM5A-210ENST00000544760 NUTM2DQ5VT03 806 aaPredicted RBP23.09■■□□□ 1.29
KDM5A-210ENST00000544760 DHX40Q8IX18 779 aaKnown RBP23.09■■□□□ 1.29
KDM5A-210ENST00000544760 PARD6BQ9BYG5 372 aa23.09■■□□□ 1.29
KDM5A-210ENST00000544760 HYPKQ9NX55 129 aa23.09■■□□□ 1.29
KDM5A-210ENST00000544760 EIF5P55010 431 aaKnown RBP23.08■■□□□ 1.29
KDM5A-210ENST00000544760 BRD3Q15059 726 aa23.08■■□□□ 1.29
KDM5A-210ENST00000544760 LRRC31Q6UY01 552 aa23.08■■□□□ 1.29
KDM5A-210ENST00000544760 PNPLA6Q8IY17 1366 aa23.08■■□□□ 1.29
KDM5A-210ENST00000544760 USP8P40818 1118 aa23.08■■□□□ 1.28
KDM5A-210ENST00000544760 LEO1Q8WVC0 666 aaPredicted RBP23.08■■□□□ 1.28
KDM5A-210ENST00000544760 PTPRMP28827 1452 aa23.07■■□□□ 1.28
KDM5A-210ENST00000544760 TSHZ3Q63HK5 1081 aa23.07■■□□□ 1.28
KDM5A-210ENST00000544760 ARMCX5Q6P1M9 558 aa23.07■■□□□ 1.28
KDM5A-210ENST00000544760 STAP2Q9UGK3 403 aa23.07■■□□□ 1.28
KDM5A-210ENST00000544760 SETD1BQ9UPS6 1966 aaKnown RBP23.07■■□□□ 1.28
KDM5A-210ENST00000544760 PPP1R12AO14974 1030 aaPredicted RBP23.07■■□□□ 1.28
KDM5A-210ENST00000544760 CTAGE5O15320 804 aa23.07■■□□□ 1.28
KDM5A-210ENST00000544760 SFPQP23246 707 aaKnown RBP eCLIP23.07■■□□□ 1.28
KDM5A-210ENST00000544760 EPC1Q9H2F5 836 aa23.07■■□□□ 1.28
KDM5A-210ENST00000544760 PPFIA4O75335 1185 aa23.06■■□□□ 1.28
KDM5A-210ENST00000544760 HSP90B1P14625 803 aaKnown RBP23.06■■□□□ 1.28
KDM5A-210ENST00000544760 NFE2L2Q16236 605 aa23.06■■□□□ 1.28
KDM5A-210ENST00000544760 LARP6Q9BRS8 491 aaKnown RBP23.06■■□□□ 1.28
KDM5A-210ENST00000544760 IL25Q9H293 177 aa23.06■■□□□ 1.28
KDM5A-210ENST00000544760 RIMS2Q9UQ26 1411 aa23.06■■□□□ 1.28
KDM5A-210ENST00000544760 PSME1Q06323 249 aa23.05■■□□□ 1.28
KDM5A-210ENST00000544760 CCDC30Q5VVM6 783 aa23.05■■□□□ 1.28
KDM5A-210ENST00000544760 C8orf58Q8NAV2 365 aa23.05■■□□□ 1.28
KDM5A-210ENST00000544760 HNRNPLLQ8WVV9 542 aaKnown RBP23.05■■□□□ 1.28
KDM5A-210ENST00000544760 SETD1AO15047 1707 aaKnown RBP23.05■■□□□ 1.28
KDM5A-210ENST00000544760 LARP1BQ659C4 914 aaKnown RBP23.05■■□□□ 1.28
KDM5A-210ENST00000544760 BICD2Q8TD16 824 aa23.05■■□□□ 1.28
KDM5A-210ENST00000544760 MEIS3Q99687 375 aa23.05■■□□□ 1.28
KDM5A-210ENST00000544760 CHD2O14647 1828 aaKnown RBP23.05■■□□□ 1.28
KDM5A-210ENST00000544760 AOX1Q06278 1338 aa23.04■■□□□ 1.28
KDM5A-210ENST00000544760 SGSM2O43147 1006 aa23.04■■□□□ 1.28
KDM5A-210ENST00000544760 PDCP20941 246 aa23.04■■□□□ 1.28
KDM5A-210ENST00000544760 CDC37L1Q7L3B6 337 aa23.04■■□□□ 1.28
KDM5A-210ENST00000544760 ERC1Q8IUD2 1116 aa23.04■■□□□ 1.28
KDM5A-210ENST00000544760 MICALL1Q8N3F8 863 aa23.04■■□□□ 1.28
KDM5A-210ENST00000544760 PDE11AQ9HCR9 933 aa23.04■■□□□ 1.28
KDM5A-210ENST00000544760 FANCGO15287 622 aa23.04■■□□□ 1.28
KDM5A-210ENST00000544760 EIF3JO75822 258 aaKnown RBP23.04■■□□□ 1.28
KDM5A-210ENST00000544760 KRT24Q2M2I5 525 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms